Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla03g01472 | ATGGCTCCAAACCATTGGTTCGCCAAGAAGAGTGGACCAGTTAACATCATTGTAGGTTCTCATGTCTGGATTGAAGATCCAAAACTAGCTTGGATCGACGGTGAAGTTTTCCGCATCAATGGCGAGGAAGTTCACGTCAGGGCTACCAATGGGAAAACAGTTGTTACCAATATATCAAAAATATTCCCCAAGGATACTGAAGCACCTGCTGCAGGTGTAGATGACATGACAAAGCTGTCATACTTGCATGAACCTGGGGTTCTGAGCAACTTGGCAACCAGATATGAACTCAATGAAATTTATACATACACTGGAAATATACTTATTGCAATAAATCCATTCCAAAGATTACCTCATCTTTATGATACTCACATGATGGAACAATACAAAGGAGCTGGATTTGGAGAACTAAGTCCTCATGTCTTTGCAGTTGCTGAAGTGGCATATAGGGCAATGATTAATGAAGGAAAAAGCAATTCAATTCTAGTTAGTGGAGAAAGTGGTGCTGGTAAGACTGAGACCACAAAGATGCTCATGCGGTATCTTGCATACCTTGGAGGTCGATCTGGAGTGGAAGGGCGAACTGTTGAACAACAAGTCCTAGAATCCAATCCTGTTCTTGAAGCATTTGGAAATGCAAAAACTGTCAGGAACAACAATTCAAGTCGCTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGGAGAATATCTGGGGCAGCTGTTCGAACTTATTTGCTTGAAAGGTCTCGAGTATGTCAGATCTCGAATCCTGAAAGAAATTATCATTGCTTTTACCTTCTCTGCGCAGCTCCTCCTGAGGAAAGGGAGAAGTATAAATTAGCAGACCCTAAATCGTTCCACTACTTAAATCAATCTAGCTGCTTTGAGTTGGATGGAGTGAACGATGCCCATGAATATCTTGCAACCAGAAGGGCTATGGATGTAGTTGGAATCAGCGAGGAGGAGCAGGAGGCAATTTTTAGGGTTGTAGCTGCAATTTTGCATCTTGGAAATATTGAATTTGCCAAGGGAGAGGAGATTGATTCTTCAGTCATTAAGGATGAAAAATCCAGATTCCATCTTAATACCACAGCCGAACTGCTTAAGTGTGATGCAAAGAGTTTGGAGGATGCACTGATTCAACGTGTTATGGTAACACCAGAAGAGGTTATCACTCGAACTCTTGATCCTGTGGCTGCTTTGGGTAGCAGGGATGCCTTGGCTAAAACGATCTATTCGCGACTCTTTGACTGGCTTGTGGAGAAGATTAACAATTCAATTGGGCAAGACCCGAATTCTAAATCATTGATTGGAGTTCTGGATATTTATGGATTTGAGAGTTTTAAGTTCAACAGTTTTGAACAGTTCTGCATCAATTTTACAAATGAAAAACTGCAGCAACATTTCAATCAGCATGTTTTCAAAATGGAGCAGGAGGAATATACCAAAGAACAAATCAATTGGAGTTATATTGAGTTTGTTGATAACCAGGATGTCTTGGATCTGATTGAAAAGGTGTTGAACTTTTCTTCCCCCATCCACCCCATTATTATTTGTCATTCTGAAGATATTTCTGATCATGCGTGTCAGATCCTAAAACCAGGAGGAATTATCGCACTTCTGGATGAGGCCTGCATGTTTCCTAAATCTACACACGAAACATTTGCTCAGAAGTTATACCAGACTTTCAAGAACAACAAACGCTTCATTAAGCCTAAGCTATCTCGTACTAGTTTTACAATATCTCATTATGCTGGAGAGGTGACTTATTTGGCAGATCTATTCTTGGATAAAAACAAAGATTACGTGGTAGCAGAACATCAGGCCCTCTTGACAGCTTCAAAATGCCCCTTTGCGAGGGCTTTATTTCCTCCTCAACCAGAGGAAACAGCAAAATCCTCAAAATTTTCTTCCATTGGTTCACGTTTTAAATTACAACTTCAATCTTTAATGGAGACCTTAAATTCAACAGAGCCTCACTACATCAGATGTGTAAAGCCAAATAATGCGCTCAAGCCTGCTATTTTTGAGAACTCAAATGTTATCCAACAATTGCGTTGTGGTGGTGTCCTTGAAGCAATTAGGATCAGCTGTGCTGGATATCCTACCAGAAGAACATTTTATGAGTTCCTCCTACGTTTTGGGGTTCTTGCACCAGAAGTTTTGGATGGAAACTATGATGACAAGGTAGCATGCCAGATGATCCTGGATAAAATGGGTTTGAAAGGATACCAGATTGGTAAGACAAAAATCTTCCTGAGGGCTGGGCAGATGGCTTCTCTGGACGCAAAGAGAACAGAGGTGCTTAGCAATGCTGCCAGAACTATTCAAATGCAAATTAGAACATTTATTGCACGCAAGGAGTTTGTTGCATTACGTAAAGCTGCTATACATGTGCAATCATTTACTCGAGGTACTTTCTTGGACTGTCTAAGAAATACCACATGCTCAATTGAGTTTCTTTTTGGTCTTTTTCGAATTTCAAAAATGTTCTTTAGCAATAGCATAGCAAGAAATGGAAATTTTTTGCACGACTGTAGGGGAAATGTTGAAGATGTTTGTGAGAAGGGTTGTGACTTGCTAGAAGGAGATGGTCCAAAATCTCCAACCCTGTCAAGGGCAGGGTATCTAGCCCATTTTTTCTTTTTCCTTCTTCTTTCTGGGATAGCAAACAGTGTTTTGGCTCGAAAACTATTTGAGCAGTTGCGACGCGAAGCAGCAGCTTTAAAGATCCAGAAGTGTTTCAAGCGATATATTGCCAGGAAATCATACTTAGGTTTGCTCTCATCTGCAATCACATTGCAAACAGGGTTAAGGGCAATGAAGGCTCGCGATGAATTCAGATTCAGAAAGCGTACTAAGGCAGCAATTATCATTCAGGCACGTTTGCGTTGTCACCTGGCGTATTCTTACTATAAGAGACTCCAAAAGGCTGCACTATACACGCAGTGTGGTTGGAGGCGACGAGTTGCACGAAAGGAGCTAAGAAGTCTGAAAATGGCTGCAAGGGAAACTGGAGCACTCAAAGAAGCAAAAGACAAATTAGAAAAACGTGTAGAAGAACTTACATGGCGCTTGCAACTTGAGAAGCGGCTGAGGACTGATCTGGAAGAGGAGAAAGCCCAAGAAATTGCCAAATTACAAGATGCTTTACACAGCATGCAATTACAAGTTGAAGAAGCAAATGCTCAAGTTATCAAAGAGCGAGAGGCTGCTCAGAAAGCTATTGAAGAAGCACCTCCAGTTGTCAAGGAAACTCCAGTTTTCGTGGAGGATACCGAAAAAATCAATTCCTTAATGGCTGAGGTGGAGAGTTTAAAGGCTTCACTGCTGTCAGAAAAAACGTCAGCTGAAGAAGCTAGAAGAGCTTGTACAGATGCTGAAGCCAAAAATGTGGAGCTGACTAAAAGACTTCAAGATGCAGAGCAGAAGGTGGATCAGCTTCAGGAGTCAGTGCAGAGGCTTGAAGAAAAGCTTTCAAATTCAGAATCAGAGAACCAGGTACTTCGTCAACAAGCATTGACTATGTCGCCGACAGGAAAAGCTTTGTCTGCTAGACCAAAGTCAATGATTATTCAGAGGACACCAGAGAATGGAAATATTCCACATGGAGAGGCCAAAGTATCATCTGATACGACTCTTGCATTATCAAATGTACGTGAGCCTGAATCAGAGGAAAAACCACAGAAATCACTTAATGAGAAACAGCAGGAGAACCAGGATCTGCTAGTGAAGTGCATATCTCAAGATTTAGGATTTTCCGGAGGCAAACCAATTGCTGCTTGTGTCATATATAAATGTCTTCTTCACTGGAGGTCGTTTGAAGTTGAAAGAACCAGCATATTTGATCGAATCATTCAAACAATAGCTTCATCCATAGAGGTCCCGGATAACAATGATGTATTAACTTATTGGTTATCTAATACATCCACATTATTGTTGCTTCTTCAACACACTCTCAAAGCTAGTGGAGCTGCTAGCTTGACTCCTCAAAGGAGGAGAACTACTTCAGCTTCTCTTTTTGGAAGGATGTCTCAAGGATTAAGGGCTTCTCCACAAAGTGCTGGACTATCATTTCTTAATGGTCGGGGGCTTGGTAGATTGGACGATTTTCGACAGGTTGAGGCAAAGTATCCAGCACTATTGTTTAAGCAGCAGCTTACAGCATTTTTGGAGAAAATATATGGAATGATAAGAGACAACCTAAAGAAAGAGATTTCGCCTTTACTTGGACTATGTATTCAGGCCCCTAGGACATCACGGGCGAGCTTAGTGAAAGGACGCTCCCAAGCAAACGCTATGGCTCAGCAAGCCTTAATTGCACATTGGCAAAGCATTGTGAAAAGCTTAGACAATTATTTGAAGATCATGAAAGCAAACTATGTACCTCCATTCTTGGTCCGCAAAGTTTTCACTCAGATATTCTCATTTATTAATGTCCAACTATTTAACAGCCTTCTTTTGCGGCGGGAGTGTTGTTCATTCAGCAATGGAGAGTATGTGAAAGCTGGCTTGTCTGAATTAGAACAGTGGTGTTCTGGAGCAACTGAGGAATATGCAGGTTCTGCCTGGGATGAATTAAAGCACATTAGGCAGGCTGTTGGATTCCTTGTTATACATCAAAAACCCAAAAAGACGTTGAATGAGATAACAAAAGACCTATGTCCTGTGCTTAGCATACAACAGTTGTATAGGATCAGTACAATGTACTGGGATGACAAATATGGCACACATAGCGTATCTTCAGAAGTTATTTCGAGCATGCGAATTCTGATGACTGAAGACTCCAACAATGCCATCAGCTCATTCCTGTTAGATGATGACTCTAGGCCTCTTTTTTGGGTTAGATTGTGGAAGCAATTTGTATTTAGTGTGATGTAA | 4887 | 41.11 | MAPNHWFAKKSGPVNIIVGSHVWIEDPKLAWIDGEVFRINGEEVHVRATNGKTVVTNISKIFPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGFGELSPHVFAVAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISNPERNYHCFYLLCAAPPEEREKYKLADPKSFHYLNQSSCFELDGVNDAHEYLATRRAMDVVGISEEEQEAIFRVVAAILHLGNIEFAKGEEIDSSVIKDEKSRFHLNTTAELLKCDAKSLEDALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKVLNFSSPIHPIIICHSEDISDHACQILKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTASKCPFARALFPPQPEETAKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDGNYDDKVACQMILDKMGLKGYQIGKTKIFLRAGQMASLDAKRTEVLSNAARTIQMQIRTFIARKEFVALRKAAIHVQSFTRGTFLDCLRNTTCSIEFLFGLFRISKMFFSNSIARNGNFLHDCRGNVEDVCEKGCDLLEGDGPKSPTLSRAGYLAHFFFFLLLSGIANSVLARKLFEQLRREAAALKIQKCFKRYIARKSYLGLLSSAITLQTGLRAMKARDEFRFRKRTKAAIIIQARLRCHLAYSYYKRLQKAALYTQCGWRRRVARKELRSLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRTDLEEEKAQEIAKLQDALHSMQLQVEEANAQVIKEREAAQKAIEEAPPVVKETPVFVEDTEKINSLMAEVESLKASLLSEKTSAEEARRACTDAEAKNVELTKRLQDAEQKVDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKALSARPKSMIIQRTPENGNIPHGEAKVSSDTTLALSNVREPESEEKPQKSLNEKQQENQDLLVKCISQDLGFSGGKPIAACVIYKCLLHWRSFEVERTSIFDRIIQTIASSIEVPDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGRGLGRLDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAMAQQALIAHWQSIVKSLDNYLKIMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEQWCSGATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRILMTEDSNNAISSFLLDDDSRPLFWVRLWKQFVFSVM | 1628 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 30225431 | 30238193 | - | ClCG03G015310.2 | Cla03g01472 | 269972 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla03g01472 | 1628 | Pfam | Myosin head (motor domain) | 535 | 756 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla03g01472 | 1628 | Pfam | Myosin head (motor domain) | 73 | 507 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla03g01472 | 1628 | Gene3D | - | 956 | 1005 | - | - | |
Cla03g01472 | 1628 | Gene3D | - | 904 | 955 | - | - | |
Cla03g01472 | 1628 | Gene3D | - | 769 | 815 | - | - | |
Cla03g01472 | 1628 | Gene3D | - | 261 | 319 | - | - | |
Cla03g01472 | 1628 | ProSiteProfiles | Myosin motor domain profile. | 71 | 768 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla03g01472 | 1628 | ProSiteProfiles | IQ motif profile. | 906 | 935 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | SMART | MYSc_2a | 65 | 769 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla03g01472 | 1628 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 17 | 66 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cla03g01472 | 1628 | ProSiteProfiles | IQ motif profile. | 771 | 797 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | Coils | Coil | 1000 | 1080 | - | - | |
Cla03g01472 | 1628 | Gene3D | - | 703 | 766 | - | - | |
Cla03g01472 | 1628 | PANTHER | MYOSIN-5 | 15 | 507 | - | - | |
Cla03g01472 | 1628 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 321 | 637 | - | - | |
Cla03g01472 | 1628 | ProSiteProfiles | Dilute domain profile. | 1285 | 1596 | IPR002710 | - | |
Cla03g01472 | 1628 | CDD | MyosinXI_CBD | 1236 | 1611 | IPR037975 | GO:0007015 | |
Cla03g01472 | 1628 | CDD | MYSc_Myo11 | 85 | 756 | IPR036018 | - | |
Cla03g01472 | 1628 | Pfam | DIL domain | 1472 | 1575 | IPR002710 | - | |
Cla03g01472 | 1628 | PRINTS | Myosin heavy chain signature | 491 | 519 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla03g01472 | 1628 | PRINTS | Myosin heavy chain signature | 158 | 183 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla03g01472 | 1628 | PRINTS | Myosin heavy chain signature | 205 | 232 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla03g01472 | 1628 | PRINTS | Myosin heavy chain signature | 438 | 466 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla03g01472 | 1628 | PRINTS | Myosin heavy chain signature | 101 | 120 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla03g01472 | 1628 | Gene3D | Kinesin motor domain | 74 | 698 | IPR036961 | - | |
Cla03g01472 | 1628 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 853 | 1006 | IPR027417 | - | |
Cla03g01472 | 1628 | SMART | DIL_2 | 1471 | 1578 | IPR002710 | - | |
Cla03g01472 | 1628 | SMART | iq_5 | 905 | 927 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | SMART | iq_5 | 953 | 975 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | SMART | iq_5 | 770 | 792 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | SMART | iq_5 | 976 | 998 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | SMART | iq_5 | 928 | 950 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | ProSiteProfiles | IQ motif profile. | 929 | 958 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | Coils | Coil | 1119 | 1174 | - | - | |
Cla03g01472 | 1628 | PANTHER | MYOSIN-5 | 535 | 810 | - | - | |
Cla03g01472 | 1628 | Pfam | Myosin N-terminal SH3-like domain | 18 | 59 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cla03g01472 | 1628 | Gene3D | - | 448 | 659 | - | - | |
Cla03g01472 | 1628 | PANTHER | MYOSIN | 15 | 507 | - | - | |
Cla03g01472 | 1628 | Pfam | IQ calmodulin-binding motif | 955 | 975 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | Pfam | IQ calmodulin-binding motif | 773 | 791 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | Pfam | IQ calmodulin-binding motif | 908 | 926 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | ProSiteProfiles | IQ motif profile. | 954 | 980 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | PANTHER | MYOSIN-5 | 894 | 1615 | - | - | |
Cla03g01472 | 1628 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 42 | 808 | IPR027417 | - | |
Cla03g01472 | 1628 | ProSiteProfiles | IQ motif profile. | 977 | 1006 | IPR000048 | GO:0005515 | |
Cla03g01472 | 1628 | PANTHER | MYOSIN | 535 | 810 | - | - | |
Cla03g01472 | 1628 | PANTHER | MYOSIN | 894 | 1615 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01661 | Cla-Chr2:31426214 | Cla03g01472 | Cla-Chr3:30225431 | 0 | dispersed | |
Cla03g01472 | Cla-Chr3:30225431 | Cla09g00324 | Cla-Chr9:3151804 | 0 | dispersed | |
Cla03g01472 | Cla-Chr3:30225431 | Cla06g00123 | Cla-Chr6:1339129 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla03g01472 | K10357 | - | csv:101204300 | 2622.42 |