Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01496 ATGGAAGTGGGATTGGTTTTTTTGAGTTTATATGGAATGGAGGAGGTTCTGATTCTTCAGCTGGTGATTCTTTGTCTCTTCATTGCTGTTAATGCTTCCAACCTTGGGGAAATTGCTGGATTCAGCTACTCTCCACCCCCTTCAAGTTTTCAAGCATTTCCTCCGGTTTTAGGAACATCTGGTCCAGTCCAACATGAAAAATCGTTGATAATCAATGGACCAAGCTCAGCGCCTCAGCAAAATGAGTCAACTTTGCAACCACCAGTTATGTTACCAGCAATTGCTCCAGGTCTGTTGCCTGATACGATCAAAGGGTTTATACCATCCGCTTCACCCCATGCTCCGACCGAGTCGCCACCATTTAATAGTATGCCTCAGCCACCTTTACCAGTTCAACCAAATGCACCATTGATTTCACCAAGTGCACCAGAACCAGAAGGTAAAGCACCAGCGAATGAGACTCCTCTGGCAATGGTTTCTCCAGATCCAGCTGTGTCATCCTCAAATTCTCCACATTATCCCCCAGCAAGTTTCCCGCATGAGCAAACAAATATTTCATCGAGTTCTCATCAAATCACTTCACCAAATGTAGCTCCAATCCCCGAGCCAATTTCCCCAGCGAGCAAGTTGCCCAAGAACTCACCAGCTAGTCATCCGGTAGTTTCTGAAAGACCTCCATCCATATTACCAGGTGAATGTCTGTTTGTGATCTTATCTCAATTCTTATTTTTTATCCGATCTATTTTGAAATTCTTTGTTTGGTTGGTCAAATTTGATGTTCCAGAGCCCAATATCTCTCCAATGGTGGCTATTTCCCCAAAAGCTGGTGACAGAAATAGATTAGAAGCACCAGCAGCTACACCTTATAATGCACTGCCCAAGTATATGCCACCTGTGTCTCATTCCCCAGAAGAAGCTCCTTCCAGTCACAATGACATGGGACATTCTCATGACGCCCAACAGCCGATCCTTCCACCACAAAAAGCTCCGTTTCATAGAGTAAATCTTTCTCCAACATCTCCTCCTTTGCCCTCAAATTATAAGCATCACAGAAGGAAGAATTATATCATCAGTCACGCACCTGCACCTGCACCATCATATCCAATTTCCTCCCCCACGACAAAAACGCCAGGTCCAGTTATTTCTACAGCACAACATTCGCCAGGCAGACGACATCATGCTCCACCTCCGGAATCAGAACCTTCGCCAATTTCTCCTTCACAATATGCTATGCCACCACCGCTTGTGACGCATGGTTCGCCTTCTCCTTCACCATACCAAAAAGTAGCTGGGCATGCTAGAAGACATTTTTATCCTCCGAAAGCTTCACCGCTGAAACCTTGGGCAAAAAGCCCGAAGATGCCACCAATTCATACGTTGCCTCCTCCACCTCCCAATGAAGATTACAGACAAAGGAAATTAGTATACAAGAAAATGCTTGTTCAATTTGCTTTTGTAGATTGTTTAGCTACCCAGTGCACCGAGCCGTATACAAATACTCCCCCAGGATCTCCTTGTGGTTGTGTTTGGCCCATGCAAATTGGACTTCGCCTCAGTGTTTCGCTATATACCTTCTTCCCTCTGGTTTCAGAGCTGGCAGCGGAAATTGCTGTTGGGGTGTTTGTAAAGCAAAGCCAAGTTCGCATCATTGGAGCCAATGCAGCTAACCAGCAACCAGATAAGACTGTTGTCCTTATTGATTTAGTTCCACTTGGCGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAGAAGGTTTCGATCAAAACTTCCTATTTTGGGAACTATGAAGTATTATATGTTCGATATCCAGGTTTACCTCAATCACCTCCTTCTGGAGATTCAGGACTAGATAATGAGCCTTATTTCAGTAATAGTAATGATGCGAGGACAGTAAAACCAATCGGTGTTGATGTGCAGAACAGACAGCACAAAGATAGGCTAAGTGGTGGTATGATTGCCATCGTTGCCCTATCAACTACTGTTGCAGTGGTCTTATGTGTTGCAACTGCTTGGATTTTGCTCTTCAAACGCAATGATGGCCTTTGTCAGCCAAAACCGACTCCACATGTTTCGTTATCCTCCCTCAATAAACCATCAGGTAATATGGATTTCCTACTTTCATTGCCCCTGGCAAAGGCGGATCTTTTGCAACGTTATTTTGTTGCATTTGTTAGCTCACTGTTCTCAGTCCTCCTCCTACATTTTTCTAATCTTGCAGGTGCTGGTGGATCAGTCATGGCAACCATGCCTAGTTCAGCATCTTTATCCTTTGGATCTAGCATTGCCCCATATTCAGGGTCAGCCAAGACATTCAGCGCCTCTGACATTGAGAGAGCCACCAATGATTTTGATCCTTCAAGAATATTGGGAGAGGGTGGCTTTGGACGTGTTTACAGAGGCGTTCTTGAAGATGGTACCGAAGTAGCAGTCAAAGTTCTCAAGAGAGATGATCATCAGGGTGGTCGAGAATTCTTGGCTGAAGTTGAAATGCTTAGTCGTCTCCACCATAGAAATTTGGTCAAGTTGATTGGAATATGTACCGAGGAACGTAGCCGCGCCCTGGTGTATGAACTTATTCCAAATGGCAGTGTGGAATCTCACTTGCATGGTGTTGATAAGGAAACTGCCCCACTTGATTGGGCTGCCCGGATCAAGATAGCACTTGGCGCTGCTCGGGGTTTATCCTATCTACATGAGGATTCAAGTCCTAGAGTCATACATCGAGACTTCAAATCCAGCAATATCTTGTTAGAAAATGATTTTACACCAAAGGTTTCTGACTTTGGGTTGGCTAGAACTGCAATGGATGAGGAAAGCAGACACATATCGACACGTGTCATGGGAACTTTCGGGTACGTGGCGCCAGAGTATGCAATGACTGGCCATCTACTTGTGAAGAGTGACGTTTATAGCTACGGGGTCGTTCTTCTTGAGCTATTAACTGGCAGGAAACCAGTAGATATGTCGCAACCGCCAGGTGAAGAAAATCTTGTTGCTTGGGCTCGTCCTCTCCTCACAAGCAAAGAAGGCCTAGATGTTATGATTGACAAATCACTAGATTCTAATATTCCTTTCGAAAATATTGCTAAAGTGGCAGCCATTGCTTCAATGTGTGTGCAACCGGAGGTGTCACATCGACCTTTCATGGGCGAGGTTGTTCAAGCATTGAAACTAGTTTGCAACCAATGCAACAAGGCTCGAGAAACAAGCTCACTGGCTGGTTCAAGCCCAGAGAGTTCAACTATCAATACAAATGATGATGAGACATCAAGCTCAAGATACATGCTAGACTCTTTTCATAGCGAATATTTAATACCTAACTCAATTTCGAGTCTAGATGGCATCGATACACATCTCTCAATTTCAGACCTGTTAAATACTTCGATCGGTATCGGAATGCAGGAATCTAGATCGCTGGAAAGATGCTTTAGTTCTGATCCTCCTAGAACCGGAAAAAGCAGAAGGCAGTTCTGGCAAAGAATGAGAAGATACTCCGGAAGTAGCATAAGTGAACATGGAATGCCTACTAGAATATGGTCAGGTTCTACCTAA 3573 44.3 MEVGLVFLSLYGMEEVLILQLVILCLFIAVNASNLGEIAGFSYSPPPSSFQAFPPVLGTSGPVQHEKSLIINGPSSAPQQNESTLQPPVMLPAIAPGLLPDTIKGFIPSASPHAPTESPPFNSMPQPPLPVQPNAPLISPSAPEPEGKAPANETPLAMVSPDPAVSSSNSPHYPPASFPHEQTNISSSSHQITSPNVAPIPEPISPASKLPKNSPASHPVVSERPPSILPGECLFVILSQFLFFIRSILKFFVWLVKFDVPEPNISPMVAISPKAGDRNRLEAPAATPYNALPKYMPPVSHSPEEAPSSHNDMGHSHDAQQPILPPQKAPFHRVNLSPTSPPLPSNYKHHRRKNYIISHAPAPAPSYPISSPTTKTPGPVISTAQHSPGRRHHAPPPESEPSPISPSQYAMPPPLVTHGSPSPSPYQKVAGHARRHFYPPKASPLKPWAKSPKMPPIHTLPPPPPNEDYRQRKLVYKKMLVQFAFVDCLATQCTEPYTNTPPGSPCGCVWPMQIGLRLSVSLYTFFPLVSELAAEIAVGVFVKQSQVRIIGANAANQQPDKTVVLIDLVPLGEKFDNTTAFLTYQRFWHKKVSIKTSYFGNYEVLYVRYPGLPQSPPSGDSGLDNEPYFSNSNDARTVKPIGVDVQNRQHKDRLSGGMIAIVALSTTVAVVLCVATAWILLFKRNDGLCQPKPTPHVSLSSLNKPSGNMDFLLSLPLAKADLLQRYFVAFVSSLFSVLLLHFSNLAGAGGSVMATMPSSASLSFGSSIAPYSGSAKTFSASDIERATNDFDPSRILGEGGFGRVYRGVLEDGTEVAVKVLKRDDHQGGREFLAEVEMLSRLHHRNLVKLIGICTEERSRALVYELIPNGSVESHLHGVDKETAPLDWAARIKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLENDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGEENLVAWARPLLTSKEGLDVMIDKSLDSNIPFENIAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNQCNKARETSSLAGSSPESSTINTNDDETSSSRYMLDSFHSEYLIPNSISSLDGIDTHLSISDLLNTSIGIGMQESRSLERCFSSDPPRTGKSRRQFWQRMRRYSGSSISEHGMPTRIWSGST 1190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30528622 30535110 + ClCG03G015570.2 Cla03g01496 269996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01496 1190 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 279 1189 - -
Cla03g01496 1190 MobiDBLite consensus disorder prediction 292 348 - -
Cla03g01496 1190 MobiDBLite consensus disorder prediction 105 223 - -
Cla03g01496 1190 Gene3D Transferase(Phosphotransferase) domain 1 866 1084 - -
Cla03g01496 1190 ProSitePatterns Serine/Threonine protein kinases active-site signature. 912 924 IPR008271 GO:0004672|GO:0006468
Cla03g01496 1190 MobiDBLite consensus disorder prediction 1076 1097 - -
Cla03g01496 1190 SUPERFAMILY Protein kinase-like (PK-like) 770 1063 IPR011009 -
Cla03g01496 1190 MobiDBLite consensus disorder prediction 113 140 - -
Cla03g01496 1190 MobiDBLite consensus disorder prediction 161 198 - -
Cla03g01496 1190 MobiDBLite consensus disorder prediction 398 420 - -
Cla03g01496 1190 Gene3D Phosphorylase Kinase; domain 1 766 865 - -
Cla03g01496 1190 PANTHER OS01G0750732 PROTEIN 279 1189 - -
Cla03g01496 1190 ProSitePatterns Protein kinases ATP-binding region signature. 796 818 IPR017441 GO:0005524
Cla03g01496 1190 ProSiteProfiles Protein kinase domain profile. 790 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla03g01496 1190 Pfam Protein tyrosine and serine/threonine kinase 794 1063 IPR001245 GO:0004672|GO:0006468
Cla03g01496 1190 CDD STKc_IRAK 796 1064 - -
Cla03g01496 1190 MobiDBLite consensus disorder prediction 360 430 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01496 Cla-Chr3:30528622 Cla07g00141 Cla-Chr7:1588057 0 dispersed
Cla11g00502 Cla-Chr11:5689932 Cla03g01496 Cla-Chr3:30528622 9.78E-87 dispersed
Cla02g02072 Cla-Chr2:35796154 Cla03g01496 Cla-Chr3:30528622 2.59E-70 transposed
Cla10g01096 Cla-Chr10:25170630 Cla03g01496 Cla-Chr3:30528622 8.46E-120 transposed
Cla03g01496 Cla-Chr3:30528622 Cla09g00062 Cla-Chr9:598165 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80454 PF07714 PK_Tyr_Ser-Thr 3.50E-49 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01496 - - bhj:120071316 1882.84