Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla03g01496 | ATGGAAGTGGGATTGGTTTTTTTGAGTTTATATGGAATGGAGGAGGTTCTGATTCTTCAGCTGGTGATTCTTTGTCTCTTCATTGCTGTTAATGCTTCCAACCTTGGGGAAATTGCTGGATTCAGCTACTCTCCACCCCCTTCAAGTTTTCAAGCATTTCCTCCGGTTTTAGGAACATCTGGTCCAGTCCAACATGAAAAATCGTTGATAATCAATGGACCAAGCTCAGCGCCTCAGCAAAATGAGTCAACTTTGCAACCACCAGTTATGTTACCAGCAATTGCTCCAGGTCTGTTGCCTGATACGATCAAAGGGTTTATACCATCCGCTTCACCCCATGCTCCGACCGAGTCGCCACCATTTAATAGTATGCCTCAGCCACCTTTACCAGTTCAACCAAATGCACCATTGATTTCACCAAGTGCACCAGAACCAGAAGGTAAAGCACCAGCGAATGAGACTCCTCTGGCAATGGTTTCTCCAGATCCAGCTGTGTCATCCTCAAATTCTCCACATTATCCCCCAGCAAGTTTCCCGCATGAGCAAACAAATATTTCATCGAGTTCTCATCAAATCACTTCACCAAATGTAGCTCCAATCCCCGAGCCAATTTCCCCAGCGAGCAAGTTGCCCAAGAACTCACCAGCTAGTCATCCGGTAGTTTCTGAAAGACCTCCATCCATATTACCAGGTGAATGTCTGTTTGTGATCTTATCTCAATTCTTATTTTTTATCCGATCTATTTTGAAATTCTTTGTTTGGTTGGTCAAATTTGATGTTCCAGAGCCCAATATCTCTCCAATGGTGGCTATTTCCCCAAAAGCTGGTGACAGAAATAGATTAGAAGCACCAGCAGCTACACCTTATAATGCACTGCCCAAGTATATGCCACCTGTGTCTCATTCCCCAGAAGAAGCTCCTTCCAGTCACAATGACATGGGACATTCTCATGACGCCCAACAGCCGATCCTTCCACCACAAAAAGCTCCGTTTCATAGAGTAAATCTTTCTCCAACATCTCCTCCTTTGCCCTCAAATTATAAGCATCACAGAAGGAAGAATTATATCATCAGTCACGCACCTGCACCTGCACCATCATATCCAATTTCCTCCCCCACGACAAAAACGCCAGGTCCAGTTATTTCTACAGCACAACATTCGCCAGGCAGACGACATCATGCTCCACCTCCGGAATCAGAACCTTCGCCAATTTCTCCTTCACAATATGCTATGCCACCACCGCTTGTGACGCATGGTTCGCCTTCTCCTTCACCATACCAAAAAGTAGCTGGGCATGCTAGAAGACATTTTTATCCTCCGAAAGCTTCACCGCTGAAACCTTGGGCAAAAAGCCCGAAGATGCCACCAATTCATACGTTGCCTCCTCCACCTCCCAATGAAGATTACAGACAAAGGAAATTAGTATACAAGAAAATGCTTGTTCAATTTGCTTTTGTAGATTGTTTAGCTACCCAGTGCACCGAGCCGTATACAAATACTCCCCCAGGATCTCCTTGTGGTTGTGTTTGGCCCATGCAAATTGGACTTCGCCTCAGTGTTTCGCTATATACCTTCTTCCCTCTGGTTTCAGAGCTGGCAGCGGAAATTGCTGTTGGGGTGTTTGTAAAGCAAAGCCAAGTTCGCATCATTGGAGCCAATGCAGCTAACCAGCAACCAGATAAGACTGTTGTCCTTATTGATTTAGTTCCACTTGGCGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAGAAGGTTTCGATCAAAACTTCCTATTTTGGGAACTATGAAGTATTATATGTTCGATATCCAGGTTTACCTCAATCACCTCCTTCTGGAGATTCAGGACTAGATAATGAGCCTTATTTCAGTAATAGTAATGATGCGAGGACAGTAAAACCAATCGGTGTTGATGTGCAGAACAGACAGCACAAAGATAGGCTAAGTGGTGGTATGATTGCCATCGTTGCCCTATCAACTACTGTTGCAGTGGTCTTATGTGTTGCAACTGCTTGGATTTTGCTCTTCAAACGCAATGATGGCCTTTGTCAGCCAAAACCGACTCCACATGTTTCGTTATCCTCCCTCAATAAACCATCAGGTAATATGGATTTCCTACTTTCATTGCCCCTGGCAAAGGCGGATCTTTTGCAACGTTATTTTGTTGCATTTGTTAGCTCACTGTTCTCAGTCCTCCTCCTACATTTTTCTAATCTTGCAGGTGCTGGTGGATCAGTCATGGCAACCATGCCTAGTTCAGCATCTTTATCCTTTGGATCTAGCATTGCCCCATATTCAGGGTCAGCCAAGACATTCAGCGCCTCTGACATTGAGAGAGCCACCAATGATTTTGATCCTTCAAGAATATTGGGAGAGGGTGGCTTTGGACGTGTTTACAGAGGCGTTCTTGAAGATGGTACCGAAGTAGCAGTCAAAGTTCTCAAGAGAGATGATCATCAGGGTGGTCGAGAATTCTTGGCTGAAGTTGAAATGCTTAGTCGTCTCCACCATAGAAATTTGGTCAAGTTGATTGGAATATGTACCGAGGAACGTAGCCGCGCCCTGGTGTATGAACTTATTCCAAATGGCAGTGTGGAATCTCACTTGCATGGTGTTGATAAGGAAACTGCCCCACTTGATTGGGCTGCCCGGATCAAGATAGCACTTGGCGCTGCTCGGGGTTTATCCTATCTACATGAGGATTCAAGTCCTAGAGTCATACATCGAGACTTCAAATCCAGCAATATCTTGTTAGAAAATGATTTTACACCAAAGGTTTCTGACTTTGGGTTGGCTAGAACTGCAATGGATGAGGAAAGCAGACACATATCGACACGTGTCATGGGAACTTTCGGGTACGTGGCGCCAGAGTATGCAATGACTGGCCATCTACTTGTGAAGAGTGACGTTTATAGCTACGGGGTCGTTCTTCTTGAGCTATTAACTGGCAGGAAACCAGTAGATATGTCGCAACCGCCAGGTGAAGAAAATCTTGTTGCTTGGGCTCGTCCTCTCCTCACAAGCAAAGAAGGCCTAGATGTTATGATTGACAAATCACTAGATTCTAATATTCCTTTCGAAAATATTGCTAAAGTGGCAGCCATTGCTTCAATGTGTGTGCAACCGGAGGTGTCACATCGACCTTTCATGGGCGAGGTTGTTCAAGCATTGAAACTAGTTTGCAACCAATGCAACAAGGCTCGAGAAACAAGCTCACTGGCTGGTTCAAGCCCAGAGAGTTCAACTATCAATACAAATGATGATGAGACATCAAGCTCAAGATACATGCTAGACTCTTTTCATAGCGAATATTTAATACCTAACTCAATTTCGAGTCTAGATGGCATCGATACACATCTCTCAATTTCAGACCTGTTAAATACTTCGATCGGTATCGGAATGCAGGAATCTAGATCGCTGGAAAGATGCTTTAGTTCTGATCCTCCTAGAACCGGAAAAAGCAGAAGGCAGTTCTGGCAAAGAATGAGAAGATACTCCGGAAGTAGCATAAGTGAACATGGAATGCCTACTAGAATATGGTCAGGTTCTACCTAA | 3573 | 44.3 | MEVGLVFLSLYGMEEVLILQLVILCLFIAVNASNLGEIAGFSYSPPPSSFQAFPPVLGTSGPVQHEKSLIINGPSSAPQQNESTLQPPVMLPAIAPGLLPDTIKGFIPSASPHAPTESPPFNSMPQPPLPVQPNAPLISPSAPEPEGKAPANETPLAMVSPDPAVSSSNSPHYPPASFPHEQTNISSSSHQITSPNVAPIPEPISPASKLPKNSPASHPVVSERPPSILPGECLFVILSQFLFFIRSILKFFVWLVKFDVPEPNISPMVAISPKAGDRNRLEAPAATPYNALPKYMPPVSHSPEEAPSSHNDMGHSHDAQQPILPPQKAPFHRVNLSPTSPPLPSNYKHHRRKNYIISHAPAPAPSYPISSPTTKTPGPVISTAQHSPGRRHHAPPPESEPSPISPSQYAMPPPLVTHGSPSPSPYQKVAGHARRHFYPPKASPLKPWAKSPKMPPIHTLPPPPPNEDYRQRKLVYKKMLVQFAFVDCLATQCTEPYTNTPPGSPCGCVWPMQIGLRLSVSLYTFFPLVSELAAEIAVGVFVKQSQVRIIGANAANQQPDKTVVLIDLVPLGEKFDNTTAFLTYQRFWHKKVSIKTSYFGNYEVLYVRYPGLPQSPPSGDSGLDNEPYFSNSNDARTVKPIGVDVQNRQHKDRLSGGMIAIVALSTTVAVVLCVATAWILLFKRNDGLCQPKPTPHVSLSSLNKPSGNMDFLLSLPLAKADLLQRYFVAFVSSLFSVLLLHFSNLAGAGGSVMATMPSSASLSFGSSIAPYSGSAKTFSASDIERATNDFDPSRILGEGGFGRVYRGVLEDGTEVAVKVLKRDDHQGGREFLAEVEMLSRLHHRNLVKLIGICTEERSRALVYELIPNGSVESHLHGVDKETAPLDWAARIKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLENDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGEENLVAWARPLLTSKEGLDVMIDKSLDSNIPFENIAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNQCNKARETSSLAGSSPESSTINTNDDETSSSRYMLDSFHSEYLIPNSISSLDGIDTHLSISDLLNTSIGIGMQESRSLERCFSSDPPRTGKSRRQFWQRMRRYSGSSISEHGMPTRIWSGST | 1190 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 30528622 | 30535110 | + | ClCG03G015570.2 | Cla03g01496 | 269996 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla03g01496 | 1190 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 279 | 1189 | - | - | |
Cla03g01496 | 1190 | MobiDBLite | consensus disorder prediction | 292 | 348 | - | - | |
Cla03g01496 | 1190 | MobiDBLite | consensus disorder prediction | 105 | 223 | - | - | |
Cla03g01496 | 1190 | Gene3D | Transferase(Phosphotransferase) domain 1 | 866 | 1084 | - | - | |
Cla03g01496 | 1190 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 912 | 924 | IPR008271 | GO:0004672|GO:0006468 | |
Cla03g01496 | 1190 | MobiDBLite | consensus disorder prediction | 1076 | 1097 | - | - | |
Cla03g01496 | 1190 | SUPERFAMILY | Protein kinase-like (PK-like) | 770 | 1063 | IPR011009 | - | |
Cla03g01496 | 1190 | MobiDBLite | consensus disorder prediction | 113 | 140 | - | - | |
Cla03g01496 | 1190 | MobiDBLite | consensus disorder prediction | 161 | 198 | - | - | |
Cla03g01496 | 1190 | MobiDBLite | consensus disorder prediction | 398 | 420 | - | - | |
Cla03g01496 | 1190 | Gene3D | Phosphorylase Kinase; domain 1 | 766 | 865 | - | - | |
Cla03g01496 | 1190 | PANTHER | OS01G0750732 PROTEIN | 279 | 1189 | - | - | |
Cla03g01496 | 1190 | ProSitePatterns | Protein kinases ATP-binding region signature. | 796 | 818 | IPR017441 | GO:0005524 | |
Cla03g01496 | 1190 | ProSiteProfiles | Protein kinase domain profile. | 790 | 1066 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla03g01496 | 1190 | Pfam | Protein tyrosine and serine/threonine kinase | 794 | 1063 | IPR001245 | GO:0004672|GO:0006468 | |
Cla03g01496 | 1190 | CDD | STKc_IRAK | 796 | 1064 | - | - | |
Cla03g01496 | 1190 | MobiDBLite | consensus disorder prediction | 360 | 430 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g01496 | Cla-Chr3:30528622 | Cla07g00141 | Cla-Chr7:1588057 | 0 | dispersed | |
Cla11g00502 | Cla-Chr11:5689932 | Cla03g01496 | Cla-Chr3:30528622 | 9.78E-87 | dispersed | |
Cla02g02072 | Cla-Chr2:35796154 | Cla03g01496 | Cla-Chr3:30528622 | 2.59E-70 | transposed | |
Cla10g01096 | Cla-Chr10:25170630 | Cla03g01496 | Cla-Chr3:30528622 | 8.46E-120 | transposed | |
Cla03g01496 | Cla-Chr3:30528622 | Cla09g00062 | Cla-Chr9:598165 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80454 | PF07714 | PK_Tyr_Ser-Thr | 3.50E-49 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla03g01496 | - | - | bhj:120071316 | 1882.84 |