Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01507 ATGAGGTTATCGTCCTCTGCAATTCTTGTCCTCTTTCTCTTCTTTCACCTTCTTCTTTGCTTCGCTACTTTCCCTTCCCTTTCCATTTCCCTCTTAACCGTCACTAAATCCGAGTTGGTGCCCGGCGAGATCAATGCTACTGCCGACTCTAACTCCTCGAGATCCGCCAATGATGACCACAGTTTTGCTAACATAATCGATCGGGCTCTCGAGAGGGAATTCACTGAGAATGAGCAGACTGATGAAGTCGCGGATGCTGGCAGCTTCAACAACAGCGTTGCTGAGAAGCAGGCAGTTTTGGAAACTGTTGCTCGAGTTAAGTCAAAGAAGAATGAATCGAAAGAGGAGAAATCATTTCAGTTCCATGATGTCTTCCATTTAGATAATGAGAATCGAGCAGAAGACATGCCCACATTAATTGATCGGAAGGACAATGTTTTTATTATATCCAATCCCAAGTCAAAGTATCCCGTGCTCCAATTGGATTTAAGGTTGATTTCAGATCTAGTTGTTGTTATTGTTTCTGCAACTTGTGGTGGCATTGCTTTCGCATGTGCAGGACAACCGGTCTTTACTGGATACCTGTTGGCTGGATCTCTCATTGGACCCGGAGGTTTAAGCTTTGTCAGCGAAATGGTGCAAGTTGAGACAGTTGCTCAGTTTGGTGTGATCTTCCTTCTTTTTGCATTGGGCCTGGAATTCTCCACTACAAAACTTCGTGTGGTTCGAGCAGTGGCTATTCTTGGAGGATTGCTCCAGATTTTCCTTTTTATGTGCTTGTGTGGAATTACAGCTTCGCTATGTGGTGGTAAATCTTCAGAGGGTGTATTTGTTGGTGCATTCTTGTCTATGTCTTCGACTGCAGTGGTCTTGAAATTTTTAATGGAACGCAATAGCGTCAATGCCATTCATGGTCAGGTGACCATTGGTACTCTTATTCTTCAGGATTGTGCTGTTGGCTTGCTGTTTGCGCTGCTTCCGATTCTTGGTGGTACTTCTGGTGTTCTTCAAGGAGTTCTGTCCATGACTAAGTCGTTGGTGGTCCTGATTACGTTTTTGATTATTTTGACAATATTATCTCGTACATGTGTTCCGAGGTTCCTTAAGCTTATGATTAGCTTGTCATCTCAGACTAATGAGCTCTATCAATTGGCAGCTGTTGCATTCTGCTTACTTGTTGCTTGGTGCAGTGATAAACTGGGCTTAAGCCTTGAATTGGGTTCCTTTGCTGCTGGTGTGATGATATCAACTACTGATCTTGCTCAGCATACACTTGAACAGGTTGAGCCCATTCGCAACTTCTTTGCTGCTCTTTTTCTTGCCAGCATTGGGATGCTAATTCATGTTCATTTCCTATGGAACCACATTGATATTTTACTTGCGGCTGTAATATTGGTCATCATTATAAAAACTGTAGTGGTTACTACTGTTGTCAAGGGATTTGGATACAACAACAAGACTTCACTTCTGGTTGGGATGTCACTTGCACAAATTGGAGAATTTGCTTTTGTCCTTCTAAGCCGTGCCTCTAATCTCCATCTTGTTGAGGGAAAATTGTATATACTGCTGCTTGGGACAACTGCACTTAGCCTGGTGACTACGCCATTGCTTTTCAAGCTTATTCCTGCCGTGGTACGTATTGGAGTGTTGTTGCGGTGGTTTTCACCTGATGGTTTGAGTGAGATTGGATTCAAAGGAGAGGGCTTTCGAATGGATGGTGCCAAGCGCATTACTTTGGTGGTTCAAGACTCTCACGTTTCATGA 1764 43.48 MRLSSSAILVLFLFFHLLLCFATFPSLSISLLTVTKSELVPGEINATADSNSSRSANDDHSFANIIDRALEREFTENEQTDEVADAGSFNNSVAEKQAVLETVARVKSKKNESKEEKSFQFHDVFHLDNENRAEDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVFTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGVFVGAFLSMSSTAVVLKFLMERNSVNAIHGQVTIGTLILQDCAVGLLFALLPILGGTSGVLQGVLSMTKSLVVLITFLIILTILSRTCVPRFLKLMISLSSQTNELYQLAAVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHIDILLAAVILVIIIKTVVVTTVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYILLLGTTALSLVTTPLLFKLIPAVVRIGVLLRWFSPDGLSEIGFKGEGFRMDGAKRITLVVQDSHVS 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30667795 30680806 + ClCG03G015710.1 Cla03g01507 270007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01507 587 Pfam Sodium/hydrogen exchanger family 170 539 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cla03g01507 587 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 10 586 IPR045158 GO:0015386|GO:0071805|GO:1902600
Cla03g01507 587 Gene3D - 163 546 IPR038770 -
Cla03g01507 587 PANTHER K(+) EFFLUX ANTIPORTER 6 10 586 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01507 Cla-Chr3:30667795 Cla08g01666 Cla-Chr8:29306965 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01507 - - csv:101208614 1034.63