Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla03g01510 | ATGGAGAAGGGTGATCTAGATGTGGCTGGGAAAGTGGTGGTTGTCGCCATTAAAGCCACCTCGAAGGAAGTTTCTAAGGCTGCTCTCGTTTGGGCTTTGACGCATGTTGTTCAGCCTGGAGATCATATTAAGCTCCTTGTGGTTATCCCTTCTCATCAATCAAGTAAATGGATGCGGGGATTTTCTCGACTTACTAGCGACTGTGCGATCGGTCATCTGAGAACTCCTTCAGGAACTTTTTCCGATCGGAAGAATGACATTGTGCATTCATGTTCTCAGATGGTACATCAGCTTCATGGTGCATATGACCCACTGAAGATAAAAGTCAGGATCAAAATTCTTTCTGGTTTGGCTCGGGGTATGGTGGCTACTGAAGCTAAGAAAGCTCAATCGAACTGGGTGATATTGGATAAGAATTTGAAAGATGAAAGGAAAAACTGTTTGGAAGAGCTGCAATGCAATGTTGTTCTTATGAAGAAATCTCAGCCTAAGGTTCTTCGTCTGAATTTGATGGAATCCCCTAAAATAAATACTAGAGAACCTTGGGTACCATCACATGAATTAGATGTTTCTCAGAAGTGTCTTAAAAGCTATTTCGATGAATCGATCATGTTTAGGGCTCCTGATGTGACTCCTGACAGTACTCCTGATGTAGAGTCTCCTCTTACCGTAACTGATATTGGAACATCATCAATATCGAGCTCAGATGTAGGCAGTTCATCCTTGTTCTCTGGGATTTGTGGCAGCTTGAGAAATGAATCCAGAACAGCAGCCGACGGAGGGAGAAATATGTCTGGTTCTGAATATGATTCTGAGAGCGAAAAGCAAACTCCCTCAGTTTCGTATTTCCAGCGTTGTATGGTTGATATCATAAGTTCCAGGCGTAAATTCCAGCAACACGCAATGGAAGAATCACAAAATGCTCATCATAGACCTCCGGCTCCAACACGTCAAGGTCTGGTAAAAAAAATGCCTAATCTTTCTCTAGAACCTAGCACTGATGTGGCGCATTGCAATACCGAAATTAGCTCAAGCAGAAACATAAGGAACACGGTTTCGTTATCCAGAAAAGCACCTCTAGGCCCTCCTCCGCTGTGTTCTATGTGTCAACACAAGGCCCCTGCATTTGGGAATCCTCCTAGATGGTTCACTTATGCTGAACTTGAAGTCGCTACAAGTGGGTTTGCACAAACAAATTTTTTGGCTGAGGGTGGATTTGGTTCTGTGCACCGAGGCGTCTTATCAGATGGACAAGTCGTTGCTGTCAAGCAATATAAACTGGCTAGTACCCAGGGAGATCGAGAGTTTTGTTCAGAAGTTGAGGTCTTAAGTTGTGCCCAACATCGGAACGTCGTGATGCTCATTGGATTTTGTGTGGAGGGTGGAAGAAGGTTACTTGTTTATGAATATATTTGCAATGGATCTCTTGATTCCCATCTATATGGGAGAAATCGTGATCCACTGAAATGGTCTGCACGACAAAAGATTGCAGTCGGGGCTGCTCGAGGATTGAGATACCTTCACGAAGAATGTAGAGTGGGCTGTATTGTGCACCGTGATATCCGCCCAAACAATATCCTCCTTACTCATGATTTCGAGCCACTAGTCGGAGATTTTGGGCTGGCAAGGTGGCAGCCGGATGGCGACCTAGCAGTAGAAACTAGAATCCTTGGGAGATTTGGCTACCTGGCTCCAGAGTATGCACAGAGTGGCCAAATCACAGAGAAAGCTGATACATACTCGTTTGGCGTAGTGCTGCTGGAACTCGTGACTGGACGCAAAGCGATTGATTTAAATCGTCCCAAGGGCCAGCAATGCCTCACTGAATGGGCGCGAAACCTGTTGCGGAAAGATGCGATCTCCGAACTAGTCGATCCATGTTTGAGGAACTGTTATTCAGACAAGGAAGTTCACCGAATGCTGCAATGCGCTTCCTTGTGCATCAAGCGCGATCCATACGTAAGACCGCGCATGTCTCAGATCTTGGACGCTGATCTTATGAACACTGTATCGGACGGCTCGCAATCCAACGCTTTCTTCGTCGAGTCTCCGGCGACCAGAGGAGTCAATACTCCCTCCGCCACTCTCAACTTCCCGCCGATGCAGTCGCTTTTTAAACCTCGCCGCTCATTTTGCTCCTTCAATCACTTCTACCGCTCATCAACTTTCGTTTCGGGAGACGCAACATCGGAAACTACCGTTGGAAGAAGCTCAACATTCATCCATCCAACTGCTGTTGTACATCCGAATGCCGTAATTGGCGAGGATGGGTATATTGGTCCATTCTGTACTGTGGGAGCCTTCGCAAAGCTGGGAAATGGTTGTCAGTTGTATCCTGGGAGCCACATTTTTGGCTTTACAGAACTAGGGGATCAATGTGTCTTGATGACTGGCGCTATAGTTGGTGAGGACCTTCCTGGTCGCACAGTCATTGGGTGTAATAACAAAATAGGTCACCATGCAGTGGTTGGCATTAGATGTCAAGACATGAAATACAAGCCAGGAGAAGAATGTTTTCTTGATATTGGAGATAACAATGACGTAAGAGAACATTCATCAATCCACCGGTCTTCGAAGTCCAGTGATGTGACGGCTATTGGTGATAACAATCTCATAATGGGATCCTGTCATATTGCTCATGATTGCAAGATTGGTAACAACAATATTTTTGCAAATAATACTCTCTTAGCCGGCCACGTTGTGGTGGAGATCATTGGCTTGAGAACTGCTTACAGGAAGATATTCATGTCTACTGATACAAATTCTAAAGGGTTGGAAGAACGTCTCAAGGAAGTGGAACAGCATGAAAAGTTGGCTCACATATCTTCAGTGCGTTCCATGATTCAGTCAATTCGTGCGTCATTTGAACAAAATCGTCGGGGCATATGCAAATTCAGACTATGGAGTGGCTCTTAA | 2916 | 45.27 | MEKGDLDVAGKVVVVAIKATSKEVSKAALVWALTHVVQPGDHIKLLVVIPSHQSSKWMRGFSRLTSDCAIGHLRTPSGTFSDRKNDIVHSCSQMVHQLHGAYDPLKIKVRIKILSGLARGMVATEAKKAQSNWVILDKNLKDERKNCLEELQCNVVLMKKSQPKVLRLNLMESPKINTREPWVPSHELDVSQKCLKSYFDESIMFRAPDVTPDSTPDVESPLTVTDIGTSSISSSDVGSSSLFSGICGSLRNESRTAADGGRNMSGSEYDSESEKQTPSVSYFQRCMVDIISSRRKFQQHAMEESQNAHHRPPAPTRQGLVKKMPNLSLEPSTDVAHCNTEISSSRNIRNTVSLSRKAPLGPPPLCSMCQHKAPAFGNPPRWFTYAELEVATSGFAQTNFLAEGGFGSVHRGVLSDGQVVAVKQYKLASTQGDREFCSEVEVLSCAQHRNVVMLIGFCVEGGRRLLVYEYICNGSLDSHLYGRNRDPLKWSARQKIAVGAARGLRYLHEECRVGCIVHRDIRPNNILLTHDFEPLVGDFGLARWQPDGDLAVETRILGRFGYLAPEYAQSGQITEKADTYSFGVVLLELVTGRKAIDLNRPKGQQCLTEWARNLLRKDAISELVDPCLRNCYSDKEVHRMLQCASLCIKRDPYVRPRMSQILDADLMNTVSDGSQSNAFFVESPATRGVNTPSATLNFPPMQSLFKPRRSFCSFNHFYRSSTFVSGDATSETTVGRSSTFIHPTAVVHPNAVIGEDGYIGPFCTVGAFAKLGNGCQLYPGSHIFGFTELGDQCVLMTGAIVGEDLPGRTVIGCNNKIGHHAVVGIRCQDMKYKPGEECFLDIGDNNDVREHSSIHRSSKSSDVTAIGDNNLIMGSCHIAHDCKIGNNNIFANNTLLAGHVVVEIIGLRTAYRKIFMSTDTNSKGLEERLKEVEQHEKLAHISSVRSMIQSIRASFEQNRRGICKFRLWSGS | 971 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 30698263 | 30713679 | - | ClCG03G015740.1 | Cla03g01510 | 270010 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla03g01510 | 971 | SUPERFAMILY | Protein kinase-like (PK-like) | 378 | 675 | IPR011009 | - | |
Cla03g01510 | 971 | SMART | tyrkin_6 | 395 | 667 | IPR020635 | GO:0004713|GO:0006468 | |
Cla03g01510 | 971 | Pfam | Bacterial transferase hexapeptide (six repeats) | 866 | 897 | IPR001451 | - | |
Cla03g01510 | 971 | Gene3D | Hexapeptide repeat proteins | 734 | 805 | - | - | |
Cla03g01510 | 971 | CDD | STKc_IRAK | 401 | 662 | - | - | |
Cla03g01510 | 971 | Gene3D | Transferase(Phosphotransferase) domain 1 | 471 | 679 | - | - | |
Cla03g01510 | 971 | SUPERFAMILY | Trimeric LpxA-like enzymes | 736 | 902 | IPR011004 | - | |
Cla03g01510 | 971 | Gene3D | Phosphorylase Kinase; domain 1 | 366 | 470 | - | - | |
Cla03g01510 | 971 | PANTHER | - | 11 | 662 | - | - | |
Cla03g01510 | 971 | MobiDBLite | consensus disorder prediction | 253 | 276 | - | - | |
Cla03g01510 | 971 | ProSiteProfiles | Protein kinase domain profile. | 395 | 680 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla03g01510 | 971 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 516 | 528 | IPR008266 | GO:0004672|GO:0006468 | |
Cla03g01510 | 971 | Gene3D | Hexapeptide repeat proteins | 806 | 901 | - | - | |
Cla03g01510 | 971 | PANTHER | OS01G0253100 PROTEIN | 11 | 662 | IPR045271 | GO:0004714|GO:0006468 | |
Cla03g01510 | 971 | Gene3D | - | 902 | 971 | IPR037157 | - | |
Cla03g01510 | 971 | Pfam | Protein tyrosine and serine/threonine kinase | 399 | 662 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g01510 | Cla-Chr3:30698263 | Cla05g01971 | Cla-Chr5:31514001 | 8.98E-36 | dispersed | |
Cla03g01510 | Cla-Chr3:30698263 | Cla07g01296 | Cla-Chr7:30096135 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80455 | PF07714 | PK_Tyr_Ser-Thr | 3.50E-41 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla03g01510 | - | - | csv:101208373 | 1252.27 |