Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01599 ATGATGGCTGGGACTAATCAAATCAATCTCAACGAGGCTAGGATGGTGGTTCCACTAAATACCTGGGTTCTCATTTCCAACTTTAAGTTGGCTTACAATCTTCTTCGTCGACCTGATGGGACCTTCAATCGGCATTTGGCAGAGTTTCTCGACAGAAAAGTCCCGGCGAATGCTAACCCGGTTGATGGGACTTTCTCGTTCGATGTCATTATCGATCGTGCTACGAGTCTGCTTTGTAGAATTTATCGACCAGCCAACGGAGGGGAACCTCAGACTACTAACATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTTGTTGTTCCTGTTATTGTTTTCTTTCATGGTGGAAGCTTTGCGCATTCGTCTGCTAACAGTGCTATCTATGATACACTATGCCGCCGATTGGTGAGCCTTTGCAAGGCTGTTGTTGTCTCTGTGAACTACCGTCGTGCACCTGAAAATCGGTATCCATGTGCTTATGATGATGGATGGACTGCACTTAATTGGGTAAATTCAAGATCATGGCTCCAAAGTAAAGACTCCAAAACGTATATTTATTTGGCTGGCGATAGTTCGGGTGGAAACATCGTACACCATGTTGCATCAAGAGCAGTAAGGTCGGGAATCGAAGTATTGGGTAATATACTTCTCAATCCAATGTTTGGAGGACAGGAAAGAACTAAATCTGAGATTCGATTGGATGGAAAGTATTTCGTCACCATCCGGGATAGAGATTGGTATTGGAGGGCCTTCCTCCCTGAAGGAGAAGATAGAGATCATCCAGCATGTAATCCCTTTGGCCCGAGGGGCAATAGCCTCGAAGGAATCAAATTCCCAAAAAGCCTTGTCGTGGTGGCTGGTTTAGATCTTGTCCAAGATTGGCAATTGGCTTATGCCAAAGGGCTGGAGAAGGATGGCCAAGAGGTGAAACTTTTGTATCTTGAGCAGGCAACAATTGGCTTCTACTTGCTACCAAATACCGAGCACTTCTATACCGTCATGGACGAGATAAGTGAATTCGTGAGTTCTGACTGTTAA 1041 45.05 MMAGTNQINLNEARMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGTFSFDVIIDRATSLLCRIYRPANGGEPQTTNIVDLEKPVDSEVVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVVSVNYRRAPENRYPCAYDDGWTALNWVNSRSWLQSKDSKTYIYLAGDSSGGNIVHHVASRAVRSGIEVLGNILLNPMFGGQERTKSEIRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGNSLEGIKFPKSLVVVAGLDLVQDWQLAYAKGLEKDGQEVKLLYLEQATIGFYLLPNTEHFYTVMDEISEFVSSDC 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31768523 31771161 + ClCG03G016630.1 Cla03g01599 270099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01599 346 Pfam alpha/beta hydrolase fold 111 323 IPR013094 GO:0016787
Cla03g01599 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787
Cla03g01599 346 PANTHER GIBBERELLIN RECEPTOR GID1C 4 342 - -
Cla03g01599 346 SUPERFAMILY alpha/beta-Hydrolases 57 342 IPR029058 -
Cla03g01599 346 PANTHER ARYLACETAMIDE DEACETYLASE 4 342 - -
Cla03g01599 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 186 198 IPR033140 -
Cla03g01599 346 Gene3D alpha/beta hydrolase 1 344 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01599 Cla-Chr3:31768523 Cla09g00617 Cla-Chr9:5738031 0 dispersed
Cla05g01383 Cla-Chr5:18590629 Cla03g01599 Cla-Chr3:31768523 3.93E-35 dispersed
Cla03g01599 Cla-Chr3:31768523 Cla11g00796 Cla-Chr11:11540745 2.93E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01599 K14493 - csv:101213253 654.055