Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01620 ATGGCATTCTCTATCTCCTTCCTCAAATCCTCCGCTCTCTTTCTCACCATTCTCTCTGTTTTCATCTTCTTCATCCTCTTCGCTCCCAATCGCTCGCCGGAATCCGCATCCAGAAGGTCCCTCATTGCTGCCGGCGATTTCAATTCCAGTGTCCCTTCGATCCCATCTTGTTCCTCTGTTGAATCTCACTCCGATGGCCTCGTTAACTACTTGTATTTCCATTTCTGCTTCTTTGATCAAAACCCATCTCTCTCTGTCCCTTTTCTCATTCTCTTTCTTCTCCTCCACTTCTACATCCTCATCAAAACTGCTCAAGATCACTTCTCCATTGTCACTTCCAAGCTTGCCTTTCACCTCAACTTGTCCCCGAGTATGGCCGCCGTGACGCTCTTGGCTTTGGGCAATGGCGCTCCGGATGTGTTCGCATCTGTTGCCGCGGTTCGTGGTGGTCAGTATCGAACTGGGTTCGGTGCAATTCTCTCTGCGGGCACGTTTGTTTCCGCTTTTGTGGTTGGATTTGTGGCCATTTATGCTGCTCCGTTTTCGGTGAATCCGGCTCAGTTTGTAAGGGATGTGCTGTTCTATTTGACTGCAGCATTGTTCTTGTTCTATGTGTATCTTAGTGCAGAGATTTTCTTGTGGCAAGCTGTTGGTTTTGTTGGGTTCTATCTGTTCTTTGTTGGATTGGTGTTTTGGATGGATTTGAGAATGGATAGTGGGAAAGCTAAGAGTGGGGCTGATATGGGAGTGACTAGAGAAGCTGAAATCTACCATGGTGAGTTGCCTCAAGACTGTGAGATTGGAGAAAGCTACAGAACTGTGGATGAAGGAAAAACCAATTCTGGCTTTTGGGAAGCTCTTCGAATGTCAGGTTGCTCAGAGCTTTTGATAGATTCTGGAGGTTTGGGAACACTTCTATCGAAGTGCATGCATAGAACTGATTCCATAGTGAATTTGTTTATTGGTTTTGAATATATGATAGATCATAGTAGGAGGTTTGGGATAATTCATACTTCTAAATCTAAAGTTGCTTCGAAAGTAAAGATCCCAAAAGCATGGGAAGCTCCTGTCTCGTTTCTTCTGAAGCTCACCATTCCCCAACCTGCACCTTCCCAATGGAGCAGATTCTTTACATCCGCGAATATTTCTCTTTGTCCCATTGCTCTTCTATATGCCTGTAACTCATTCATGTCGTTTAACCATCCCATTGCTTTCCTCTTACCGAATACACATTTACCTCTTTGGTTCGTAGTATTCTTAGCAAGCTCCTCTCTTGCAGTTCTGCACTTTGTCATGGAAACTGAACCCCCAAAAACTGAGCAAGTCCCTACTGTGCTTGCAGCATTTGTGATGAGTGTATTTTGGATTTCGACCACGGCTGGGGAACTTCTGAACTGTCTTGCAGCTCTTGGGGTGCTTCTCAAACTCCCAGCAGCTCTACTTGGGCTTACTGTGCTTGCCTGGGGAAATTCAGTTGGGGATCTTGTGGCTGATGTTGCTCTTGCAAAAGCAGGCCAGCCCTTGCTTGCTATGGCTGGATGCTTTGCAGGGCCAATGTTTAACATGCTTGTGGGGCTTGGTACAGCTTTAGTTATACAAACAGCTAACAGTTATCCGGAGGCGTATCAGCTTCAATTTCATATCGGAATCGTGATTGCATTCGTATTCCTACTTTTCAGCCTGATGGGCTCCCTACTTGTAATTATTTGGTACAGATTTCGGGTGCCTCGGTTTTGGGGATTCTGTCTTGTGCTGCTGTACATTGTTTTCATGGCTGCCAGTTTACTGATGGCCAAGTTTTCTTCATGA 1809 45.55 MAFSISFLKSSALFLTILSVFIFFILFAPNRSPESASRRSLIAAGDFNSSVPSIPSCSSVESHSDGLVNYLYFHFCFFDQNPSLSVPFLILFLLLHFYILIKTAQDHFSIVTSKLAFHLNLSPSMAAVTLLALGNGAPDVFASVAAVRGGQYRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVNPAQFVRDVLFYLTAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGLVFWMDLRMDSGKAKSGADMGVTREAEIYHGELPQDCEIGESYRTVDEGKTNSGFWEALRMSGCSELLIDSGGLGTLLSKCMHRTDSIVNLFIGFEYMIDHSRRFGIIHTSKSKVASKVKIPKAWEAPVSFLLKLTIPQPAPSQWSRFFTSANISLCPIALLYACNSFMSFNHPIAFLLPNTHLPLWFVVFLASSSLAVLHFVMETEPPKTEQVPTVLAAFVMSVFWISTTAGELLNCLAALGVLLKLPAALLGLTVLAWGNSVGDLVADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVIQTANSYPEAYQLQFHIGIVIAFVFLLFSLMGSLLVIIWYRFRVPRFWGFCLVLLYIVFMAASLLMAKFSS 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32087244 32091488 + ClCG03G016870.2 Cla03g01620 270120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01620 602 Pfam Sodium/calcium exchanger protein 446 595 IPR004837 GO:0016021|GO:0055085
Cla03g01620 602 Pfam Sodium/calcium exchanger protein 91 231 IPR004837 GO:0016021|GO:0055085
Cla03g01620 602 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 55 601 - -
Cla03g01620 602 Gene3D - 121 251 IPR044880 -
Cla03g01620 602 Gene3D - 377 595 IPR044880 -
Cla03g01620 602 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 55 601 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01620 Cla-Chr3:32087244 Cla10g01515 Cla-Chr10:30404035 7.98E-16 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01620 K13754 - vvi:100256252 657.521