Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01635 ATGGGTTGTGTTGTGAAGTGCGTTTTCATGATTGTTATCTTCATTTCGATGCCTTTTTCATCGCAGAACTCCCACATTTTGATTGCTAACTCATTGTTGAATACAGCAGAGAGCTTCAATGTTAAAGAGCTAGAGAGAGTTTCAGGGGAAGATGAGAGTGGAGGAAATGAACCTTTCATTCTGGAGAGAGTCAGAGCTCTACTTGGACTCAAGAGTTTACAATTGGGAAATCAAAGCCCATCAGATCTTTCACCTTTGCCGTCGCCATTGCCGTCTCCATCACCAGCCCCCATTGCTCCTTCTCCTGTTCCTATGGCAGCTCATCGAGTGCACATTCATGAACATTCCCACCCTCATCAACTCCGCTTGCACAAGAGCCGACCAGTATACAAACCTAAAAGAAAAGAAGATCCAAAAGAAGGAAGAGTCAGAAAAATTCTTGTCGCAGTTCTTGTGTCTGCAGGAGTCACCATTTTGATATGCTCTATTATTGCCTTTTGGGTCTGCAAGAAGTTCAAAAGTCAGAGAGAGGAATCCATGGAGAAGCATTCTGTTAAGAGTGAAAGAGAAGAGAAGACAGCAAGACCAAAATCTGGCCTTGATCTGTTCGATCTCGGTATGCTTGGAATGGATGTAGAAGAACAGACCCATACTTCTGTAAGTGAAAAGGAGTTATCTGTTCATAAAGAGGGGGAAAGGGACCAAGAGACGTTGGATTCAGAATCTGATAATGTAAGTGTTTCTTCAATCAAGGAAATGATGTATGTTCATGAGGAAGATGATAGTAAATCAATACAATGCGTATCTGATGGAACTCATTCCTCACCTGGGGATAGAGTTACTCCTGTTAAATGTTGTTCGTCTGATGATGAGGAATCATTCCATTCTTGTGGTGACTCCAATTTGTCGAATGCTCGCCTTTCAAATGCTTCCGGATCTTCTTCTGCGAATGTGATAACAAATTCTACTTGTTCTGTGCCAACTGTGAACTTATCAAGTAAATTGGAAATACAATGTGATGAATCTAACAAACTATTAACTTCTTACCATTCGCATCTTACCCTTTCTCCTTGTAGTTCAGAACCCAAAATGCAGATGGTTTCCCAATCTGTAGGTTGCCAAAAGAATGTCCCATCTTTATCTCCACCTCCTCCACCGCCACCGCCACCACCACCGCCTCCGCCAGTCACTGATCGCAGTTCATTTTCCTTCTCTTCACCCTTTTCAACTGGATCTACTTCCTCTTCTGCATTGTTAAGATCCTCATCTCCTGCAATGTCAGATTCTTCTTCGTTATCTCAAATACCATGGAATGATTTGCCATCACCTCAAACTGCTACTAAACCTTCACTACCATCATCTGTTATTCCTCCACCCCCTTCTCCACCTCCAAGTTTGAAAACAAACGCTTACTCTTTCAAAACTCCACCTCCTCCTCCTTCCAAGCTCCCTCAATTCATGGCATTTGGAAAAGAGGGAAATTTGCGGCCAAAACTTAAGCCTCTCCACTGGGACAAAGTAAGAGCTACACCAGATCAATCAATGGTGTGGGACAAGCTAAGATGGAGCTCATTTGAGCTAGATGAAGAAATGATTGAGTCACTATTTGGCTACAACCAACATGATTCAATGAAGAATGGTGATGCTAGCAACAAAAGCCCTTCTCCAAGCAAACATATACTAGAGGCAAAAAGACTTCAGAACCTAACCATTCTCTTAAAAGCCCTGAATCTCTCTACAGAACAAGTTTGTGAAGCCATAGAACAAGGTAGCGGGTTGCGTTTGAGACAACTTGAAGCACTGGTTAAGATGGTACCAACTCAAGAAGAAGAAGCCAAATTGTTAAGCTATGAAGGAGACATCGGTGAATTAGGTTGTACAGAGAAGTTTGTCATAGCAATTCTGAGAATACCATTCGCCTTCCAAAGAATAGAAGCCATGCTTTACAGAGAAACTTTTGAAGATGAAGTGAACCATCTACGGAATTCATTTTCCATACTAGAGGAAGCCTGCAAGGAACTAAGATCCAGCAGACTCTTCCTGAAACTACTAGAAGCCGTGCTAAAAACAGGGAATCGAATGAACGTCGGAACAAGCAGAGGAGGCGCTAGAGCATTTAAACTAGACGCCCTCCTAAAACTCTCCGACGTCAAAGGAACCGACGGCAAAACATCTCTACTCCACTTCGTGGTACAAGAAATAATCCGGTCTGAAGGAATCAGAGTATCGGGTAGCATAATGGGAAAAATCAACCAAAAAAACAAATCAAGAACCGTGGAAGAAAGAGAAAACGATTACCGAAGAATGGGGTTAGATCTGGTATCGGGGTTGAGCACGGAACTGCAGAACGTGAAGCGAGCGGCGACGATCGATCTGAAAGTAGTTGGAAGCTCGAGGGGAAATCTGAATGAGGGAATGGGGAAAATGGAGAAACTGGTGGGGAAGGAGTTGAGTGTGGATGAAAGGAGTGGGAATTTCGTGGAAGCCATGAAAGGGTTTGTGGGCTATGTGAAGAAGAGGATGGAGGAAGTGAGGAAGGATGAAGAAAGGGTAATGTCGAGTGTGAGAGAGATTACAGAGTACTTCCATGGAAATGTGAGCAAAGAAGAGACGAATCCGTTGAGGATTTTTGTGATTGTGAGAGATTTTCTTGGAATGTTGGACAATGTCTGTAAGAGCTTCAAGATTGGAAGTTGA 2697 42.97 MGCVVKCVFMIVIFISMPFSSQNSHILIANSLLNTAESFNVKELERVSGEDESGGNEPFILERVRALLGLKSLQLGNQSPSDLSPLPSPLPSPSPAPIAPSPVPMAAHRVHIHEHSHPHQLRLHKSRPVYKPKRKEDPKEGRVRKILVAVLVSAGVTILICSIIAFWVCKKFKSQREESMEKHSVKSEREEKTARPKSGLDLFDLGMLGMDVEEQTHTSVSEKELSVHKEGERDQETLDSESDNVSVSSIKEMMYVHEEDDSKSIQCVSDGTHSSPGDRVTPVKCCSSDDEESFHSCGDSNLSNARLSNASGSSSANVITNSTCSVPTVNLSSKLEIQCDESNKLLTSYHSHLTLSPCSSEPKMQMVSQSVGCQKNVPSLSPPPPPPPPPPPPPPVTDRSSFSFSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLPSPQTATKPSLPSSVIPPPPSPPPSLKTNAYSFKTPPPPPSKLPQFMAFGKEGNLRPKLKPLHWDKVRATPDQSMVWDKLRWSSFELDEEMIESLFGYNQHDSMKNGDASNKSPSPSKHILEAKRLQNLTILLKALNLSTEQVCEAIEQGSGLRLRQLEALVKMVPTQEEEAKLLSYEGDIGELGCTEKFVIAILRIPFAFQRIEAMLYRETFEDEVNHLRNSFSILEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEIIRSEGIRVSGSIMGKINQKNKSRTVEERENDYRRMGLDLVSGLSTELQNVKRAATIDLKVVGSSRGNLNEGMGKMEKLVGKELSVDERSGNFVEAMKGFVGYVKKRMEEVRKDEERVMSSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS 898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32236458 32239759 - ClCG03G017080.1 Cla03g01635 270135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01635 898 Pfam Formin Homology 2 Domain 494 887 IPR015425 -
Cla03g01635 898 SUPERFAMILY Formin homology 2 domain (FH2 domain) 502 892 - -
Cla03g01635 898 MobiDBLite consensus disorder prediction 357 377 - -
Cla03g01635 898 PANTHER FORMIN-RELATED 42 397 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cla03g01635 898 PANTHER FORMIN-RELATED 379 895 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cla03g01635 898 MobiDBLite consensus disorder prediction 216 240 - -
Cla03g01635 898 MobiDBLite consensus disorder prediction 112 129 - -
Cla03g01635 898 MobiDBLite consensus disorder prediction 399 451 - -
Cla03g01635 898 PANTHER FORMIN-LIKE PROTEIN 42 397 - -
Cla03g01635 898 PANTHER FORMIN-LIKE PROTEIN 379 895 - -
Cla03g01635 898 SMART it6_source 489 896 IPR015425 -
Cla03g01635 898 Gene3D Formin, FH2 domain 488 895 IPR042201 -
Cla03g01635 898 MobiDBLite consensus disorder prediction 84 102 - -
Cla03g01635 898 ProSiteProfiles Formin homology-2 (FH2) domain profile. 489 898 IPR015425 -
Cla03g01635 898 MobiDBLite consensus disorder prediction 357 482 - -
Cla03g01635 898 Coils Coil 650 670 - -
Cla03g01635 898 MobiDBLite consensus disorder prediction 216 244 - -
Cla03g01635 898 MobiDBLite consensus disorder prediction 452 466 - -
Cla03g01635 898 MobiDBLite consensus disorder prediction 79 138 - -
Cla03g01635 898 MobiDBLite consensus disorder prediction 378 398 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00812 Cla-Chr2:10752978 Cla03g01635 Cla-Chr3:32236458 1.33E-108 dispersed
Cla03g01635 Cla-Chr3:32236458 Cla11g00087 Cla-Chr11:1122841 1.33E-112 dispersed
Cla05g01545 Cla-Chr5:25829697 Cla03g01635 Cla-Chr3:32236458 5.89E-22 dispersed
Cla03g01635 Cla-Chr3:32236458 Cla02g01189 Cla-Chr2:25442545 3.10E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01635 - - bhj:120070661 1513.82