Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01661 ATGGCTGGTAAAGTTCAAATTCCTACCAAAAACTCAGCGCTTATTTCTATGATTGCTGATGAGGATACCGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTTGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCAAAGACAACTGTTAAACAAATTGAAGATGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATCAGTCAATATGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCAATATTGGAGATTCCTTCCAAGGATCATCCATATGACCCTGCACATGATTCAGTTCTTTCGCGAGTAAAGAACCTATTTTCTACCGAATCAGTGGCATCTGGGAGGCGTTAA 393 39.44 MAGKVQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLFSTESVASGRR 130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32466281 32470479 - ClCG03G017370.1 Cla03g01661 270161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01661 130 PIRSF V-ATP_synth_F 4 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
Cla03g01661 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 130 - -
Cla03g01661 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
Cla03g01661 130 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 1 130 - -
Cla03g01661 130 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 11 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
Cla03g01661 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
Cla03g01661 130 SUPERFAMILY AtpF-like 15 118 IPR036906 GO:0034220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01661 K02151 - csv:101215239 250.366