Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla03g01680 | ATGGCGACAGAGCAAGTTTTTCCGTTTTCTGTTGCTTCTGTGGTTGAAGATGTTCTTCAACAGCATGGAGTTCGTCCGCGTAATCTTGATTTGGCTTCGAAGAAGTCTGAAGAAGATTCCTTGAGAAGGTATGAAGCGGCTGGGTGGCTAAGGAAAACTGTTGGAGTTGTTGGTGGTAAAGACTTGCCAGCTGAGCCTTCTGAAGAGGAATTTAGGCTTGGATTAAGAAGTGGAATTATTCTTTGCAATGTTCTCAATAAGGTTCAACCTGGAGCAGTGTCAAAGGTTGTTGAAGGCCCATGTGATTCTGTAATCATTCCTGATGGGGCACCCTTATCTGCATACCAATACTTTGAGAATGTGAGAAATTTTCTGGTGGCCATAGAAGAAATGGGGTTGCCAACTTTTGAAGCCTCTGATCTAGAACAGGGAGGAAAATCTACAAGGATTGTGAACTCCGTTCTGGCACTCAAGTCGTACAGCACCTGGAAACAAGGAGGTGGAAACGGGGTGTGGAAATTTAGTGGGACAGCTAAATCACCGACATCACGGAAAAATGTGGTGCTAAAAAATTCAGAACCATTCATGAATTCTTTTACAAAAACCTCATCTACTGGTGATAGTTTTTCTCTTGAATCGTCTTCAAGTGGTGATAATAGCAATGAAGCAGAATCCTCCCGTCCTTTACATATGCTACTTTCTCAACTTCTTTCTAATAAACAGCTTGACGAAATCCCCAGTATGAAAGCTAATGCAGAAGATGTGGCAGAATCTGTATCTGAGAAGTCTCCTCCACAAATCACCTCTGCTGATGAAACGATTAAGATGGAAGAGGAAACAACTAGTTCTCCTGAAGAAATAAGTAGTCCAGAAGCAACAAGTTTTCCTGAAGAGATAAATAGTCCAAAAGATAATCCAGAGGCAGAGGCAACAAGTTGTCTTGAGGCAGAGAGTTGTCCTGAAGCAGAAAATTGTCATGAAACAGAAAGTTGTTCTGAAACAAAAACTGAAAACTGTGAGTCTAATGATCAGCGTGATGAGGAATTAGAACGCAAAATCTTGAGAAGACAGATGTTGCTTGAACAGCAACAGAGAAACATAGAGATATTGAAGGGTGCTCTTGGTGAAACCAAGGCAGGAATGCAGATTCTGCAAATGAAGTACCAAGAGGAATTCAACAATCTAGGTAAGCGCATGCATAGTGTGGCTTATGCTGCTTCAGAATACCGAAGAGTTCTTGAAGAAAATCGAAAACTATATAACCAAGTCCAAGACCTGAAAGGAAATATCAGAGTATATTGCAGAGTTCGACCATTCCTCGGTGGGCATTCAAATCGACCTTCTACTGTTGATCGTATTGATGAAGGGAATATGAGCATTGTAACACCATCAAAATACGGCAAGGAAGGAAGGAAATCATTCAGTTTTAACAAAGTATTTGGGCCTTCTGCGACCCAAGGGGAAGTATTTTCGGATACTCAACCTTTGATTCGATCCGTGCTCGATGGTTATAATGTTTGCATATTTGCTTATGGCCAAACTGGATCAGGAAAAACCTACACCATGTCAGGACCAACAGAGCTCACTGAGGACACTTTAGGTGTAAACTACAGGGCATTGAGTGATTTGTTTATTCTTTCCCAACAAAGAAAACAGACCATTTCCTATGACATATCTGTTCAGATGCTTGAGATTTACAATGACCAAATTAGGGATCTCCTTGTGACGGATTCCACTAATCGAAGATATCCTTTTTCTCAAAATGGGATTAACGTACCAGATGCATGTCTTGTACCCGTGTCATCAACATCAGATGTTATAAATCTGATGAATCTGGGCCAAAAGAATCGTGCAGTGAGCTCTACTGCCATGAATGATCGGAGCAGTCGTTCACATAGCTGCTTAACTGTTCATGTTCAAGGAAGAGATTTGACATCGGGGGCGACTCTTCGTGGGTGTATGCATCTTGTTGACTTGGCAGGAAGTGAAAGGGTTGACAAGTCTGAGGTTATAGGAGATAGATTGAAAGAGGCACAACATATCAACAAATCTCTTTCAGCATTGGGAGATGTTATTTCCTCTCTTGCTCAAAAGAATGCACATGTTCCTTATAGGAACAGTAAACTCACACAATTGCTCCAAGATTCACTTGGAGGTCAAGCAAAGACACTCATGTTTGTTCACATAAGTCCAGAGCCTGAAGCTCTTGGAGAAACATTGAGTACTTTAAAGTTCGCTGAAAGGGTTTCAACTGTTGAGCTTGGTGCTGCTCGCGTTAACAAAGATAGTACTGATGCGAAAGAGCTCAAGGAACAGATAGCTACCCTAAAGGCAGCCTTAGTGAAGAAGGATGGTGAAACAGAGCAACATTCTCGATCAAGCAGTCCAGAAAAAAGTAGGATGAAAACTTTCTTTTCATCCCCTTCACTTCCTAGCTATAAAAGTGTTGTGGAGATGTCTGTTAACAGAACAAACTCACTGGAGGATGTTCGTAATGCTGCTGAGGCTCAAAACAAAGCTAACCAAAAGCTCAAAAGAAGAAGCTTAGATCCCCGAGACATGTTAAGGAATTCTCCATGGCCACCCTTGAGTGCGACGCTTGTCAATGCAAGGGACGACGACAAAGAATCTGTTTCAAGTGATTGGGACGACAAAGTTATGTTTAACAAGAATGACATCAACATCATTGGTAGAGATGAAACTCTTACAGGACCTTGGGATGTAAACAAGTTGCCTGAGACATTTGATCAGAATTTTCTTCTAGATCCATCAAAGGTGTACCCTGAAAGCCCTTTCAACAATTCTTCAATGAACAAGAAGGAAAACCAAGAGTTTGATGTGCAGAGGAACCAGTATGAGATGGCCAGCACTGATGATTCTGATGATCATGAGGCTGCAAATAGTGAAACATCAGAGCCAGAAGTAATTTGGCAGTCAAGCCTTCCAATTCCAAAGGGTTCAAGCATTCCAAATGGTTTGGGATCAAAGACTAAGAAAACAGCTAATCCTAAGCAAGCCAAGAGCCCAGAAGTCAGGACCTTCATTCCATCATTGATTCCTCCGCCATCACGAAAACCGCAAGCTGGAGTTGCCCAACTGGTGCCCAAGACGGGCAAACAGGATGAAATGAGTCAGACAGAAGTATCAAGGATAAAGCCCCCTCTCGTTCCGCTCGCTACTTTGATCGGTCGCGAGTTGAGGAACGAGAAGGTTGAGAAACCTTTTGTGAAGTATGGACAGGCCGCTTTGGCAAAGAAAGGAGAGGACTACTTTCTGATCAAACTTGATTGCCAGCGTCTTCCTGGGAACCCTTCCACTGCATTTTCTGTCTTTGCGATTTTTGATGGACATAATGGCATTTCAGCCGCCATTTTTGCAAAGGAACATTTATTGGGTAATGTCCTAAGTGCAATTCCTCAAGGGGCTAATCGAGAAAAATGGCTTCAGGCCCTTCCCCGAGCACTAGTTGCTGGTTTTGTTAAAACTGACATAGAGTTTCAGCAGAAAGGGGAAACTTCTGGGACTACTGTTACATTTGTTGTGATTGATGGGTGGACTGTTACTGTTGCATCTGTGGGAGATTCACGGTGCATACTAGACACCCAAGGAGGTGTAGTTTCTCTATTGACAGTTGATCATAGGTTGGAGGAAAATGAAGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGTGAGGTTGGGAGGCTCAACGTTTTTGGCGGGAATGAGGTTGGTCCTCTCCGCTGCTGGCCTGGTGGCTTATGTCTTTCTAGGTCCATTGGGGATACAGATGTAGGAGAATATATTGTCCCAATACCGCACGTTAAGCAAGTGAAGGAGGCTTTGCGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTGGTTGTTGATATTATCCCATCCGAGCAACCTATACTATTACCATCAACTCCAAGGAAGAAGCAAAATGTGCTTACCTCATTCTTTGGAAAGAAATATCAAAACTCTTTGGGTAAATCTGCAAACAAACTTTCAGCTGTTGGTGTTGTGGAGGAATTGTTCGAAGAAGGTTCTGCTATGCTTGCTGAAAGGCTAGGCAAAGATTTTCCTTCGGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGTGGATCAACCCCCAAACGAAAATTTGTCGATGAACTCGGGGCCTTTCTTTTCACCGTCGTCAAAGCCATGGGAAGGTCCATTCCTCTGTGCAACTTGTCGAAAAAAGAAAGACGCCATGGAAGGAAAAAGGCCAATAAAACCTACAATAACCGTTTAG | 4287 | 42.83 | MATEQVFPFSVASVVEDVLQQHGVRPRNLDLASKKSEEDSLRRYEAAGWLRKTVGVVGGKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVSKVVEGPCDSVIIPDGAPLSAYQYFENVRNFLVAIEEMGLPTFEASDLEQGGKSTRIVNSVLALKSYSTWKQGGGNGVWKFSGTAKSPTSRKNVVLKNSEPFMNSFTKTSSTGDSFSLESSSSGDNSNEAESSRPLHMLLSQLLSNKQLDEIPSMKANAEDVAESVSEKSPPQITSADETIKMEEETTSSPEEISSPEATSFPEEINSPKDNPEAEATSCLEAESCPEAENCHETESCSETKTENCESNDQRDEELERKILRRQMLLEQQQRNIEILKGALGETKAGMQILQMKYQEEFNNLGKRMHSVAYAASEYRRVLEENRKLYNQVQDLKGNIRVYCRVRPFLGGHSNRPSTVDRIDEGNMSIVTPSKYGKEGRKSFSFNKVFGPSATQGEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPTELTEDTLGVNYRALSDLFILSQQRKQTISYDISVQMLEIYNDQIRDLLVTDSTNRRYPFSQNGINVPDACLVPVSSTSDVINLMNLGQKNRAVSSTAMNDRSSRSHSCLTVHVQGRDLTSGATLRGCMHLVDLAGSERVDKSEVIGDRLKEAQHINKSLSALGDVISSLAQKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGETLSTLKFAERVSTVELGAARVNKDSTDAKELKEQIATLKAALVKKDGETEQHSRSSSPEKSRMKTFFSSPSLPSYKSVVEMSVNRTNSLEDVRNAAEAQNKANQKLKRRSLDPRDMLRNSPWPPLSATLVNARDDDKESVSSDWDDKVMFNKNDINIIGRDETLTGPWDVNKLPETFDQNFLLDPSKVYPESPFNNSSMNKKENQEFDVQRNQYEMASTDDSDDHEAANSETSEPEVIWQSSLPIPKGSSIPNGLGSKTKKTANPKQAKSPEVRTFIPSLIPPPSRKPQAGVAQLVPKTGKQDEMSQTEVSRIKPPLVPLATLIGRELRNEKVEKPFVKYGQAALAKKGEDYFLIKLDCQRLPGNPSTAFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGANREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKEALRSRGLKDDTTCLVVDIIPSEQPILLPSTPRKKQNVLTSFFGKKYQNSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPSDPNSGIFKCAVCQVDQPPNENLSMNSGPFFSPSSKPWEGPFLCATCRKKKDAMEGKRPIKPTITV | 1428 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 32660049 | 32679260 | + | ClCG03G017570.2 | Cla03g01680 | 270180 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla03g01680 | 1428 | ProSiteProfiles | Kinesin motor domain profile. | 429 | 752 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla03g01680 | 1428 | MobiDBLite | consensus disorder prediction | 283 | 300 | - | - | |
Cla03g01680 | 1428 | SMART | kinesin_4 | 427 | 760 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla03g01680 | 1428 | MobiDBLite | consensus disorder prediction | 196 | 226 | - | - | |
Cla03g01680 | 1428 | SUPERFAMILY | Calponin-homology domain, CH-domain | 41 | 173 | IPR036872 | - | |
Cla03g01680 | 1428 | MobiDBLite | consensus disorder prediction | 835 | 866 | - | - | |
Cla03g01680 | 1428 | MobiDBLite | consensus disorder prediction | 955 | 969 | - | - | |
Cla03g01680 | 1428 | Gene3D | - | 32 | 162 | IPR036872 | - | |
Cla03g01680 | 1428 | Gene3D | Kinesin motor domain | 373 | 754 | IPR036961 | - | |
Cla03g01680 | 1428 | Coils | Coil | 409 | 429 | - | - | |
Cla03g01680 | 1428 | Pfam | Kinesin motor domain | 435 | 751 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla03g01680 | 1428 | MobiDBLite | consensus disorder prediction | 780 | 807 | - | - | |
Cla03g01680 | 1428 | Pfam | Calponin homology (CH) domain | 43 | 161 | IPR001715 | GO:0005515 | |
Cla03g01680 | 1428 | Pfam | Protein phosphatase 2C | 1103 | 1278 | IPR001932 | - | |
Cla03g01680 | 1428 | MobiDBLite | consensus disorder prediction | 922 | 1028 | - | - | |
Cla03g01680 | 1428 | MobiDBLite | consensus disorder prediction | 781 | 797 | - | - | |
Cla03g01680 | 1428 | PRINTS | Kinesin heavy chain signature | 503 | 524 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla03g01680 | 1428 | PRINTS | Kinesin heavy chain signature | 702 | 723 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla03g01680 | 1428 | PRINTS | Kinesin heavy chain signature | 622 | 639 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla03g01680 | 1428 | PRINTS | Kinesin heavy chain signature | 653 | 671 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cla03g01680 | 1428 | MobiDBLite | consensus disorder prediction | 320 | 345 | - | - | |
Cla03g01680 | 1428 | SMART | PP2C_4 | 1065 | 1295 | IPR001932 | - | |
Cla03g01680 | 1428 | CDD | KISc_C_terminal | 427 | 754 | - | - | |
Cla03g01680 | 1428 | CDD | PP2Cc | 1085 | 1278 | IPR001932 | - | |
Cla03g01680 | 1428 | ProSiteProfiles | Calponin homology (CH) domain profile. | 40 | 162 | IPR001715 | GO:0005515 | |
Cla03g01680 | 1428 | MobiDBLite | consensus disorder prediction | 250 | 345 | - | - | |
Cla03g01680 | 1428 | MobiDBLite | consensus disorder prediction | 971 | 1007 | - | - | |
Cla03g01680 | 1428 | SUPERFAMILY | PP2C-like | 1085 | 1297 | IPR036457 | - | |
Cla03g01680 | 1428 | Coils | Coil | 759 | 786 | - | - | |
Cla03g01680 | 1428 | Gene3D | - | 1080 | 1302 | IPR036457 | - | |
Cla03g01680 | 1428 | Coils | Coil | 827 | 847 | - | - | |
Cla03g01680 | 1428 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 429 | 786 | IPR027417 | - | |
Cla03g01680 | 1428 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1074 | 1297 | IPR001932 | - | |
Cla03g01680 | 1428 | PANTHER | KINESIN-LIKE PROTEIN KIN-14H | 6 | 1028 | - | - | |
Cla03g01680 | 1428 | SMART | ch_5 | 42 | 160 | IPR001715 | GO:0005515 | |
Cla03g01680 | 1428 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 6 | 1028 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g00482 | Cla-Chr3:5344976 | Cla03g01680 | Cla-Chr3:32660049 | 1.57E-75 | dispersed | |
Cla03g01680 | Cla-Chr3:32660049 | Cla10g01064 | Cla-Chr10:24658542 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla03g01680 | K10406 | - | csv:101205722 | 1780.38 |