Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01680 ATGGCGACAGAGCAAGTTTTTCCGTTTTCTGTTGCTTCTGTGGTTGAAGATGTTCTTCAACAGCATGGAGTTCGTCCGCGTAATCTTGATTTGGCTTCGAAGAAGTCTGAAGAAGATTCCTTGAGAAGGTATGAAGCGGCTGGGTGGCTAAGGAAAACTGTTGGAGTTGTTGGTGGTAAAGACTTGCCAGCTGAGCCTTCTGAAGAGGAATTTAGGCTTGGATTAAGAAGTGGAATTATTCTTTGCAATGTTCTCAATAAGGTTCAACCTGGAGCAGTGTCAAAGGTTGTTGAAGGCCCATGTGATTCTGTAATCATTCCTGATGGGGCACCCTTATCTGCATACCAATACTTTGAGAATGTGAGAAATTTTCTGGTGGCCATAGAAGAAATGGGGTTGCCAACTTTTGAAGCCTCTGATCTAGAACAGGGAGGAAAATCTACAAGGATTGTGAACTCCGTTCTGGCACTCAAGTCGTACAGCACCTGGAAACAAGGAGGTGGAAACGGGGTGTGGAAATTTAGTGGGACAGCTAAATCACCGACATCACGGAAAAATGTGGTGCTAAAAAATTCAGAACCATTCATGAATTCTTTTACAAAAACCTCATCTACTGGTGATAGTTTTTCTCTTGAATCGTCTTCAAGTGGTGATAATAGCAATGAAGCAGAATCCTCCCGTCCTTTACATATGCTACTTTCTCAACTTCTTTCTAATAAACAGCTTGACGAAATCCCCAGTATGAAAGCTAATGCAGAAGATGTGGCAGAATCTGTATCTGAGAAGTCTCCTCCACAAATCACCTCTGCTGATGAAACGATTAAGATGGAAGAGGAAACAACTAGTTCTCCTGAAGAAATAAGTAGTCCAGAAGCAACAAGTTTTCCTGAAGAGATAAATAGTCCAAAAGATAATCCAGAGGCAGAGGCAACAAGTTGTCTTGAGGCAGAGAGTTGTCCTGAAGCAGAAAATTGTCATGAAACAGAAAGTTGTTCTGAAACAAAAACTGAAAACTGTGAGTCTAATGATCAGCGTGATGAGGAATTAGAACGCAAAATCTTGAGAAGACAGATGTTGCTTGAACAGCAACAGAGAAACATAGAGATATTGAAGGGTGCTCTTGGTGAAACCAAGGCAGGAATGCAGATTCTGCAAATGAAGTACCAAGAGGAATTCAACAATCTAGGTAAGCGCATGCATAGTGTGGCTTATGCTGCTTCAGAATACCGAAGAGTTCTTGAAGAAAATCGAAAACTATATAACCAAGTCCAAGACCTGAAAGGAAATATCAGAGTATATTGCAGAGTTCGACCATTCCTCGGTGGGCATTCAAATCGACCTTCTACTGTTGATCGTATTGATGAAGGGAATATGAGCATTGTAACACCATCAAAATACGGCAAGGAAGGAAGGAAATCATTCAGTTTTAACAAAGTATTTGGGCCTTCTGCGACCCAAGGGGAAGTATTTTCGGATACTCAACCTTTGATTCGATCCGTGCTCGATGGTTATAATGTTTGCATATTTGCTTATGGCCAAACTGGATCAGGAAAAACCTACACCATGTCAGGACCAACAGAGCTCACTGAGGACACTTTAGGTGTAAACTACAGGGCATTGAGTGATTTGTTTATTCTTTCCCAACAAAGAAAACAGACCATTTCCTATGACATATCTGTTCAGATGCTTGAGATTTACAATGACCAAATTAGGGATCTCCTTGTGACGGATTCCACTAATCGAAGATATCCTTTTTCTCAAAATGGGATTAACGTACCAGATGCATGTCTTGTACCCGTGTCATCAACATCAGATGTTATAAATCTGATGAATCTGGGCCAAAAGAATCGTGCAGTGAGCTCTACTGCCATGAATGATCGGAGCAGTCGTTCACATAGCTGCTTAACTGTTCATGTTCAAGGAAGAGATTTGACATCGGGGGCGACTCTTCGTGGGTGTATGCATCTTGTTGACTTGGCAGGAAGTGAAAGGGTTGACAAGTCTGAGGTTATAGGAGATAGATTGAAAGAGGCACAACATATCAACAAATCTCTTTCAGCATTGGGAGATGTTATTTCCTCTCTTGCTCAAAAGAATGCACATGTTCCTTATAGGAACAGTAAACTCACACAATTGCTCCAAGATTCACTTGGAGGTCAAGCAAAGACACTCATGTTTGTTCACATAAGTCCAGAGCCTGAAGCTCTTGGAGAAACATTGAGTACTTTAAAGTTCGCTGAAAGGGTTTCAACTGTTGAGCTTGGTGCTGCTCGCGTTAACAAAGATAGTACTGATGCGAAAGAGCTCAAGGAACAGATAGCTACCCTAAAGGCAGCCTTAGTGAAGAAGGATGGTGAAACAGAGCAACATTCTCGATCAAGCAGTCCAGAAAAAAGTAGGATGAAAACTTTCTTTTCATCCCCTTCACTTCCTAGCTATAAAAGTGTTGTGGAGATGTCTGTTAACAGAACAAACTCACTGGAGGATGTTCGTAATGCTGCTGAGGCTCAAAACAAAGCTAACCAAAAGCTCAAAAGAAGAAGCTTAGATCCCCGAGACATGTTAAGGAATTCTCCATGGCCACCCTTGAGTGCGACGCTTGTCAATGCAAGGGACGACGACAAAGAATCTGTTTCAAGTGATTGGGACGACAAAGTTATGTTTAACAAGAATGACATCAACATCATTGGTAGAGATGAAACTCTTACAGGACCTTGGGATGTAAACAAGTTGCCTGAGACATTTGATCAGAATTTTCTTCTAGATCCATCAAAGGTGTACCCTGAAAGCCCTTTCAACAATTCTTCAATGAACAAGAAGGAAAACCAAGAGTTTGATGTGCAGAGGAACCAGTATGAGATGGCCAGCACTGATGATTCTGATGATCATGAGGCTGCAAATAGTGAAACATCAGAGCCAGAAGTAATTTGGCAGTCAAGCCTTCCAATTCCAAAGGGTTCAAGCATTCCAAATGGTTTGGGATCAAAGACTAAGAAAACAGCTAATCCTAAGCAAGCCAAGAGCCCAGAAGTCAGGACCTTCATTCCATCATTGATTCCTCCGCCATCACGAAAACCGCAAGCTGGAGTTGCCCAACTGGTGCCCAAGACGGGCAAACAGGATGAAATGAGTCAGACAGAAGTATCAAGGATAAAGCCCCCTCTCGTTCCGCTCGCTACTTTGATCGGTCGCGAGTTGAGGAACGAGAAGGTTGAGAAACCTTTTGTGAAGTATGGACAGGCCGCTTTGGCAAAGAAAGGAGAGGACTACTTTCTGATCAAACTTGATTGCCAGCGTCTTCCTGGGAACCCTTCCACTGCATTTTCTGTCTTTGCGATTTTTGATGGACATAATGGCATTTCAGCCGCCATTTTTGCAAAGGAACATTTATTGGGTAATGTCCTAAGTGCAATTCCTCAAGGGGCTAATCGAGAAAAATGGCTTCAGGCCCTTCCCCGAGCACTAGTTGCTGGTTTTGTTAAAACTGACATAGAGTTTCAGCAGAAAGGGGAAACTTCTGGGACTACTGTTACATTTGTTGTGATTGATGGGTGGACTGTTACTGTTGCATCTGTGGGAGATTCACGGTGCATACTAGACACCCAAGGAGGTGTAGTTTCTCTATTGACAGTTGATCATAGGTTGGAGGAAAATGAAGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGTGAGGTTGGGAGGCTCAACGTTTTTGGCGGGAATGAGGTTGGTCCTCTCCGCTGCTGGCCTGGTGGCTTATGTCTTTCTAGGTCCATTGGGGATACAGATGTAGGAGAATATATTGTCCCAATACCGCACGTTAAGCAAGTGAAGGAGGCTTTGCGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTGGTTGTTGATATTATCCCATCCGAGCAACCTATACTATTACCATCAACTCCAAGGAAGAAGCAAAATGTGCTTACCTCATTCTTTGGAAAGAAATATCAAAACTCTTTGGGTAAATCTGCAAACAAACTTTCAGCTGTTGGTGTTGTGGAGGAATTGTTCGAAGAAGGTTCTGCTATGCTTGCTGAAAGGCTAGGCAAAGATTTTCCTTCGGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGTGGATCAACCCCCAAACGAAAATTTGTCGATGAACTCGGGGCCTTTCTTTTCACCGTCGTCAAAGCCATGGGAAGGTCCATTCCTCTGTGCAACTTGTCGAAAAAAGAAAGACGCCATGGAAGGAAAAAGGCCAATAAAACCTACAATAACCGTTTAG 4287 42.83 MATEQVFPFSVASVVEDVLQQHGVRPRNLDLASKKSEEDSLRRYEAAGWLRKTVGVVGGKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVSKVVEGPCDSVIIPDGAPLSAYQYFENVRNFLVAIEEMGLPTFEASDLEQGGKSTRIVNSVLALKSYSTWKQGGGNGVWKFSGTAKSPTSRKNVVLKNSEPFMNSFTKTSSTGDSFSLESSSSGDNSNEAESSRPLHMLLSQLLSNKQLDEIPSMKANAEDVAESVSEKSPPQITSADETIKMEEETTSSPEEISSPEATSFPEEINSPKDNPEAEATSCLEAESCPEAENCHETESCSETKTENCESNDQRDEELERKILRRQMLLEQQQRNIEILKGALGETKAGMQILQMKYQEEFNNLGKRMHSVAYAASEYRRVLEENRKLYNQVQDLKGNIRVYCRVRPFLGGHSNRPSTVDRIDEGNMSIVTPSKYGKEGRKSFSFNKVFGPSATQGEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPTELTEDTLGVNYRALSDLFILSQQRKQTISYDISVQMLEIYNDQIRDLLVTDSTNRRYPFSQNGINVPDACLVPVSSTSDVINLMNLGQKNRAVSSTAMNDRSSRSHSCLTVHVQGRDLTSGATLRGCMHLVDLAGSERVDKSEVIGDRLKEAQHINKSLSALGDVISSLAQKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGETLSTLKFAERVSTVELGAARVNKDSTDAKELKEQIATLKAALVKKDGETEQHSRSSSPEKSRMKTFFSSPSLPSYKSVVEMSVNRTNSLEDVRNAAEAQNKANQKLKRRSLDPRDMLRNSPWPPLSATLVNARDDDKESVSSDWDDKVMFNKNDINIIGRDETLTGPWDVNKLPETFDQNFLLDPSKVYPESPFNNSSMNKKENQEFDVQRNQYEMASTDDSDDHEAANSETSEPEVIWQSSLPIPKGSSIPNGLGSKTKKTANPKQAKSPEVRTFIPSLIPPPSRKPQAGVAQLVPKTGKQDEMSQTEVSRIKPPLVPLATLIGRELRNEKVEKPFVKYGQAALAKKGEDYFLIKLDCQRLPGNPSTAFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGANREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKEALRSRGLKDDTTCLVVDIIPSEQPILLPSTPRKKQNVLTSFFGKKYQNSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPSDPNSGIFKCAVCQVDQPPNENLSMNSGPFFSPSSKPWEGPFLCATCRKKKDAMEGKRPIKPTITV 1428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32660049 32679260 + ClCG03G017570.2 Cla03g01680 270180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01680 1428 ProSiteProfiles Kinesin motor domain profile. 429 752 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla03g01680 1428 MobiDBLite consensus disorder prediction 283 300 - -
Cla03g01680 1428 SMART kinesin_4 427 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla03g01680 1428 MobiDBLite consensus disorder prediction 196 226 - -
Cla03g01680 1428 SUPERFAMILY Calponin-homology domain, CH-domain 41 173 IPR036872 -
Cla03g01680 1428 MobiDBLite consensus disorder prediction 835 866 - -
Cla03g01680 1428 MobiDBLite consensus disorder prediction 955 969 - -
Cla03g01680 1428 Gene3D - 32 162 IPR036872 -
Cla03g01680 1428 Gene3D Kinesin motor domain 373 754 IPR036961 -
Cla03g01680 1428 Coils Coil 409 429 - -
Cla03g01680 1428 Pfam Kinesin motor domain 435 751 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla03g01680 1428 MobiDBLite consensus disorder prediction 780 807 - -
Cla03g01680 1428 Pfam Calponin homology (CH) domain 43 161 IPR001715 GO:0005515
Cla03g01680 1428 Pfam Protein phosphatase 2C 1103 1278 IPR001932 -
Cla03g01680 1428 MobiDBLite consensus disorder prediction 922 1028 - -
Cla03g01680 1428 MobiDBLite consensus disorder prediction 781 797 - -
Cla03g01680 1428 PRINTS Kinesin heavy chain signature 503 524 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla03g01680 1428 PRINTS Kinesin heavy chain signature 702 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla03g01680 1428 PRINTS Kinesin heavy chain signature 622 639 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla03g01680 1428 PRINTS Kinesin heavy chain signature 653 671 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla03g01680 1428 MobiDBLite consensus disorder prediction 320 345 - -
Cla03g01680 1428 SMART PP2C_4 1065 1295 IPR001932 -
Cla03g01680 1428 CDD KISc_C_terminal 427 754 - -
Cla03g01680 1428 CDD PP2Cc 1085 1278 IPR001932 -
Cla03g01680 1428 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Cla03g01680 1428 MobiDBLite consensus disorder prediction 250 345 - -
Cla03g01680 1428 MobiDBLite consensus disorder prediction 971 1007 - -
Cla03g01680 1428 SUPERFAMILY PP2C-like 1085 1297 IPR036457 -
Cla03g01680 1428 Coils Coil 759 786 - -
Cla03g01680 1428 Gene3D - 1080 1302 IPR036457 -
Cla03g01680 1428 Coils Coil 827 847 - -
Cla03g01680 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 429 786 IPR027417 -
Cla03g01680 1428 ProSiteProfiles PPM-type phosphatase domain profile. 1074 1297 IPR001932 -
Cla03g01680 1428 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 1028 - -
Cla03g01680 1428 SMART ch_5 42 160 IPR001715 GO:0005515
Cla03g01680 1428 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 1028 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00482 Cla-Chr3:5344976 Cla03g01680 Cla-Chr3:32660049 1.57E-75 dispersed
Cla03g01680 Cla-Chr3:32660049 Cla10g01064 Cla-Chr10:24658542 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01680 K10406 - csv:101205722 1780.38