Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01694 ATGGTTTGTGAAGAAGAAGCTGTAATCCAAAAGGTTTGTGAATTATATGATGAAATCTCAAGCCTTGAAAGCCTAAAACCTTGTAACCATGTCGACACTCTCTTCACTAAATTGGTGGTCACGTGCATGCCACCCACCTCCCCTCATTTCCATATCAATTCACTTTCAAAACCACTTCAACAAATGAGATCAAATCTCATTAGCCTTTGTGGTCAAGCTGAGTCTCTTTTAGAGTCTCATTTTTCTGATCTCTTAGCCAAATTTGATTCCCCTATTCACCATCTCCATGTCTTCCCTTACTTCTCTAATTACCTTAAACTTAGTCTCCTTGAATTCTCCATCCTTCGTCGCCACTGCCCCGTCCTGCCCTCTACCGTCGCCTTCGTCGGCTCTGGCCCTCTTCCTCTTACCTCCATCGTCCTCGCCACTCGCCACCTCACCTCCGCTGTCTTCCACAATTACGATCTCGACCCCCTTGCTAATTCCAAGGCATCTAAGTTGGTGTCGCTCGACCCGGACCTGAAGACGAGGATGGTGTTTCACACGTGCGACATCATGAAAGTGACGGAGGAGCTGAAACAGTACGAGGTTGTGTTTTTGGCAGCTCTTGTAGGAATGGAGAAGGAAGAGAAATTGAAAGTGATTAAGCATTTGTCAGAGTTCATGTCAGAAGGAGCTTATTTGATGGTGAGAAGTGCTCATGGAGGAAGAGCTTTTCTATATCCTGTGGTTGAAGATTGTGATTTGGTAGGGTTTGAGGTTCTATCTGTGTTTCATCCCACTGATGAGGTTATAAACTCGGTAATAATTGCACGAAAAAAGACGAGTTTTGATAACGATAACAATAATGACAACAGTAATGATAACCACGACAAGAGTTGTTGTTTTTCTGTTAATTCAGATAAACAAGAGGAAGATGAGAATGAGAAGGTGATGATTAGTAGCAGTGGTATTGATCATAAGAATAATAACAATGGGGTTGTGCATAATAACAAATGTTCTGAGATTCAAAGCTTCAATAATCATGGAGGTAAGATTGAGGAATTTGCCATGGAAGCAGCAGCTGAGTAA 1071 42.39 MVCEEEAVIQKVCELYDEISSLESLKPCNHVDTLFTKLVVTCMPPTSPHFHINSLSKPLQQMRSNLISLCGQAESLLESHFSDLLAKFDSPIHHLHVFPYFSNYLKLSLLEFSILRRHCPVLPSTVAFVGSGPLPLTSIVLATRHLTSAVFHNYDLDPLANSKASKLVSLDPDLKTRMVFHTCDIMKVTEELKQYEVVFLAALVGMEKEEKLKVIKHLSEFMSEGAYLMVRSAHGGRAFLYPVVEDCDLVGFEVLSVFHPTDEVINSVIIARKKTSFDNDNNNDNSNDNHDKSCCFSVNSDKQEEDENEKVMISSSGIDHKNNNNGVVHNNKCSEIQSFNNHGGKIEEFAMEAAAE 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32853900 32855629 + ClCG03G017730.1 Cla03g01694 270194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01694 356 PANTHER NICOTIANAMINE SYNTHASE 3 1 300 IPR004298 GO:0030410|GO:0030418
Cla03g01694 356 Pfam Nicotianamine synthase protein 5 275 IPR004298 GO:0030410|GO:0030418
Cla03g01694 356 Gene3D Vaccinia Virus protein VP39 7 275 IPR029063 -
Cla03g01694 356 PANTHER SYNTHASE, PUTATIVE-RELATED 1 300 - -
Cla03g01694 356 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla02g01476 Cla03g01694 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01317 Cla-Chr6:26548171 Cla03g01694 Cla-Chr3:32853900 1.28E-101 transposed
Cla02g01476 Cla-Chr2:29289348 Cla03g01694 Cla-Chr3:32853900 3.30E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01694 K05953 - csv:101218907 570.081