Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01719 ATGCCAAAGCCTTTGCTCCTTCTCTTTCTCTTATCACTGCCTTTTACCAAATGGGTTCATGCCTTTCTCCCCTATAACCTCTCTGATTCCTCTCTCTTCGACTCTTATGAAACCTCCTTTGCTGCTACCCTTAAACCTCTCATGGTGCCTCTCACTCTCATTCATGGAGCAGATGCAAAACAAGCAGTCTGTTTGGATGGCACTTTGCCTGGATATCACTTGCATCGTGGATATGGGTCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAACAATATTAGGAACTGTGTCTATCGTAAAACAACCAGGCGTGGATCATCAAGATTTATGGAGAAGCAGATACCATTTACTGGAATCCTGAGCAACAGAGCTGAAGAAAATCCTGATTTTTTTAATTGGAACAGAGTAAAGGTTCGTTACTGTGATGGTGCCTCTTTTACTGGGGATTCAGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCCATGGAAGCATTGAGGGCAGAGGGAATGCGATTTGCTAAACAGGCCTTGCTTTCTGGATGCTCTGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAGTTTAGAGACTTATTTCCAAGAACTACTAAAGTAAAATGTCTGAGTGATGCTGGATTATTCCTTGATGTGGCTGATATATCTGGAGGGCACTACATTAGAAACTTATTTGGAGGTGTGGTGGGCTTGCAGGGTTTCCTCTTCCATCTGTTATATGCTGGTAATCAGGACTTTGGCGTTGCCAATATGTTAGCTGCATTGGTTATAAGTTCAGGAGCAGGAAGGAATCTGCCATCCGTTTGTACGAGCCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAATTTAATTGCTGGAATCAGAACCCCACTGTTTCTTGTCAACGCCGCATACGATTCCTGGCAGATACAATCCAGTATAGCCCCACCTTCTCTGGATCCAGCTGGGTATTGGCATGATTGTAGGCTGAATCATGCAAAATGTAACCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGCTGTTAGCGATTTCTCAAAATCCTCTAAAAATGGGTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAGAGACAGGACACATGGTTCGGCGACAATTCTCCTGTCATCGGAAACAAGGTGAATTCACTGTCCAAATTAGATGTCAGAAAATACCATCCAATTGCTCTGGCTGTTGGAGATTGGTACTTCGATAGAGCAGCGGTGAAAGCAATCGATTGTCCCTATCCTTGTGACAGGACTTGCCACCATCTGGCGAAGTCATATTGCAATTTGATTAAGAAGTCAATAAACAAGGAAGAAGAAGCTGCTGAGATGACAAATGTGATCTGCAGTCCTGCAAACTTGTTTCAACATAGAAGAAAGGTTCGTATCATCATCCTCTAG 1479 43.2 MPKPLLLLFLLSLPFTKWVHAFLPYNLSDSSLFDSYETSFAATLKPLMVPLTLIHGADAKQAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNRAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLAAMEALRAEGMRFAKQALLSGCSAGGLASILHCDEFRDLFPRTTKVKCLSDAGLFLDVADISGGHYIRNLFGGVVGLQGFLFHLLYAGNQDFGVANMLAALVISSGAGRNLPSVCTSHLDPTSCFFPQNLIAGIRTPLFLVNAAYDSWQIQSSIAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNAVSDFSKSSKNGLFINSCFAHCQTERQDTWFGDNSPVIGNKVNSLSKLDVRKYHPIALAVGDWYFDRAAVKAIDCPYPCDRTCHHLAKSYCNLIKKSINKEEEAAEMTNVICSPANLFQHRRKVRIIIL 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33156144 33162387 - ClCG03G017980.2 Cla03g01719 270219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01719 492 Pfam Pectinacetylesterase 45 431 IPR004963 GO:0016787
Cla03g01719 492 PANTHER PECTIN ACETYLESTERASE 10 251 - -
Cla03g01719 492 PANTHER PECTIN ACETYLESTERASE 265 449 - -
Cla03g01719 492 PANTHER NOTUM-RELATED 10 251 IPR004963 GO:0016787
Cla03g01719 492 PANTHER NOTUM-RELATED 265 449 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01719 Cla-Chr3:33156144 Cla05g00888 Cla-Chr5:8744604 1.27E-135 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01719 K19882 - csv:101218273 789.645