Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla04g00038 | ATGGCGGATTTCCCAAGCTACATAATTCTCTTCCTCATATGGTTCGTTTCCACCTTCACAATTCGCTTCATCTTTGCCAAAAACAAACATAACTCTCGTCTTCCTCCAAGCCCTTTTGCTCTCCCCATCATTGGCCATCTCCATCTCCTCGGTCCGTTGCCCCACAAAGCTTTCCACAAGCTCTCGACCCGCCATGGACCCTTAATGCACCTCCATTTAGGATCGGTCCCTTGCGTCGTAGTTTCGTCACCCGAAACAGCAAAACAAGTCCTCAAAACATTTGAATCTTCCTTCTCCAATAGACCCCATTTGTCAGCAGTTGACTATCTAACCTATGGCTCAGCTGATTTCTCCTTTGCTCCCTATGGACCTTATTGGAAGTTCATGAAGAAACTTTGTATGTCAGAGCTCCTCGGCGGCAGGACGCTCGACAGCCTTCGCCCCATGAGAGAGGACGAGATGCGGTGGTTTCTACGGTCATTGCAGTTGAAGGCCGCGGAGGGGAAAGAAGTTGATGTTGGAGGAGAGTTAATGAGGCTGAGCAACAATGTGATATCCAGAATGACATTGGGGAAAAGATGTGCTGAGGAAGAAGAAGAGGCTGAGGGGATAAGGAAATTAGTGAAGGATGTAGCTGAACTTTCAGGGACTTTTAATGTTTCAGATTATATTTGGTTTTGCAAGAATTTGGACTTGCAAGGGCTTGGGAAGAGGCTTAAGGAAGTTCATGAGAGGTTTGATGAGATGATGGAGAGAATGATAAAAGAACATGAAGAGAATAGTGGTGATGGGAAAGTGAAGGATTTGCTTGATATTTTGCTTCTTAAGTTTGGAGATCAAAACTCAGAGGTCAAGTTGACTAGAGAGAACATTAAGGCCTTTGTTATGGATATATTTACAGCAGGAACAGACGCATCAGCAATAACAATAGAATGGGCATTAGCAGAGCTAATAAACCATCCAAACATAATGGAGAAAGCAAGAGAAGAAGTTCACAGAGTTGTAGGAAAGAATAGAGTGATCGAAGAATCAGACATTGTCAATCTTCCTTATCTCCGAGCAATAGTAAAAGAGACCTTAAGGCTTCACTCAAGCCCATTGGTAGTAAGGGAATCAACTGAAAGTTGCACAATAAATGGTTATGAGATTCCACCAAAAACTCAAGTTTATGTGAATGTTTGGGCCATTGGGAGAGACCCAAATCACTGGGAAAACCCTCTTGAGTTTGAGCCGGAAAGGTTTATGGACAAAGAAGGGAGTGTGAATAGTGGTGATTTGAGAGGGCAAAATTTTCAGTTGTTGCCATTTGGGAGTGGGAGAAGAAGCTGTCCTGGAATAACTCTTGCTTTGCTAATGGTTCAGACAACTTTGGGTTGTATGATTCAATGCTTTGATTGGAAGGTTACTGGAGGAAATGGGAAAGTTGATATGGAAGAAGGGCCTGGCCTTACACTTCCTAGGGCACACCCTTTAGTTTGTGTTCCAAATCCTTGTCTAACTCCATTTCCACCACTTTGA | 1518 | 43.54 | MADFPSYIILFLIWFVSTFTIRFIFAKNKHNSRLPPSPFALPIIGHLHLLGPLPHKAFHKLSTRHGPLMHLHLGSVPCVVVSSPETAKQVLKTFESSFSNRPHLSAVDYLTYGSADFSFAPYGPYWKFMKKLCMSELLGGRTLDSLRPMREDEMRWFLRSLQLKAAEGKEVDVGGELMRLSNNVISRMTLGKRCAEEEEEAEGIRKLVKDVAELSGTFNVSDYIWFCKNLDLQGLGKRLKEVHERFDEMMERMIKEHEENSGDGKVKDLLDILLLKFGDQNSEVKLTRENIKAFVMDIFTAGTDASAITIEWALAELINHPNIMEKAREEVHRVVGKNRVIEESDIVNLPYLRAIVKETLRLHSSPLVVRESTESCTINGYEIPPKTQVYVNVWAIGRDPNHWENPLEFEPERFMDKEGSVNSGDLRGQNFQLLPFGSGRRSCPGITLALLMVQTTLGCMIQCFDWKVTGGNGKVDMEEGPGLTLPRAHPLVCVPNPCLTPFPPL | 505 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 1168818 | 1171122 | - | ClCG04G000330.1 | Cla04g00038 | 270266 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla04g00038 | 505 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | PRINTS | P450 superfamily signature | 434 | 443 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | PRINTS | P450 superfamily signature | 443 | 454 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | PRINTS | E-class P450 group I signature | 392 | 416 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | PRINTS | E-class P450 group I signature | 433 | 443 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | PRINTS | E-class P450 group I signature | 443 | 466 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | SUPERFAMILY | Cytochrome P450 | 28 | 495 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | Pfam | Cytochrome P450 | 35 | 493 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 436 | 445 | IPR017972 | GO:0005506|GO:0016705 | |
Cla04g00038 | 505 | Gene3D | Cytochrome P450 | 25 | 493 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla04g00038 | 505 | PANTHER | CYTOCHROME P450 93A2 | 6 | 503 | - | - | |
Cla04g00038 | 505 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 6 | 503 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g00038 | Cla-Chr4:1168818 | Cla07g01383 | Cla-Chr7:30965710 | 1.18E-142 | dispersed | |
Cla10g01191 | Cla-Chr10:26524357 | Cla04g00038 | Cla-Chr4:1168818 | 1.07E-07 | dispersed | |
Cla10g01650 | Cla-Chr10:32155645 | Cla04g00038 | Cla-Chr4:1168818 | 4.45E-07 | dispersed | |
Cla04g00038 | Cla-Chr4:1168818 | Cla09g00402 | Cla-Chr9:3865849 | 1.25E-140 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla04g00038 | K24188 | - | csv:101213143 | 893.649 |