Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla04g00251 | ATGGCAGAGGCGGCGGCAGCCGGTTTCTGGCGGAAGCTATTAACCGGACGGTGGTTGATGCTATTTGCATCACTAACAATCATGGCAATGAACGGATCAGGCTACATGTTCGGGCTCTACTCCCCCCGCATCAAATCCATTTTTGGTTACGATCAGTCGGCTCTCAATTTGATCAGCTTCTTCAAGGACTTGGGTGGCAATCTTGGGGTGGTTTCCGGCCTCCTCTACGAGGTGGCGCCACCATGGGTGGTTCTCTCGGTCGGCGCCGTCCTCAACTTCTTCGCCTATTTCATGCTCTGGTTGGCAGTTTCCGGCCGGACCGCCGCACCGGGGCTGTGGCTGATGTGCGTTTATATGGGCGTTGCTGCTAACTCATTGTCTTTTGCTAATACGGCGGCTTTGGTTACTTGTGTTCGTAACTTTCCTCTTCATCGTGGCTGCCTTCTTGGCCTTCTTAAAGGAGAGGATTATTCTAATCTCTTGCAATTATTGTTTTGTTTTAGACGATCCTCCATATATACACATCCAATATCAACAAGCACAGGGAAAGCATAG | 555 | 50.45 | MAEAAAAGFWRKLLTGRWLMLFASLTIMAMNGSGYMFGLYSPRIKSIFGYDQSALNLISFFKDLGGNLGVVSGLLYEVAPPWVVLSVGAVLNFFAYFMLWLAVSGRTAAPGLWLMCVYMGVAANSLSFANTAALVTCVRNFPLHRGCLLGLLKGEDYSNLLQLLFCFRRSSIYTHPISTSTGKA | 184 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 7844742 | 7846808 | - | ClCG04G002340.1 | Cla04g00251 | 270479 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla04g00251 | 184 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 5 | 154 | - | - | |
| Cla04g00251 | 184 | Pfam | Nodulin-like | 17 | 154 | IPR010658 | - | |
| Cla04g00251 | 184 | SUPERFAMILY | MFS general substrate transporter | 7 | 151 | IPR036259 | - | |
| Cla04g00251 | 184 | PANTHER | FACILITATOR SUPERFAMILY PROTEIN, PUTATIVE-RELATED | 5 | 154 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla04g00251 | Cla-Chr4:7844742 | Cla05g02172 | Cla-Chr5:33294586 | 4.89E-38 | dispersed | |
| Cla04g00250 | Cla-Chr4:7838083 | Cla04g00251 | Cla-Chr4:7844742 | 9.26E-106 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla04g00251 | - | - | csv:101220925 | 266.159 |