Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00296 ATGATACCAATGTCAGCGTCAAAATGGATGAGTTTAGTTAGTATTGTGTTGTTTTTGGGAGTAAGTTTAAGATTTAGAGGTGTAAATGGGTTGAGTATGGGGTATTACTTGATGAGTTGTCCCTTTGTGGATCCTATTGTGAAGAATACTGTTAATAGAGCTCTTCAAAATGATCCCACTTTGGCTGCTTCTCTCATTCGAATGCATTTTCATGACTGTTTCGTTGAGGGATGCGATGGTTCAATACTGATCGATTCGACACGAGACAACACAGCAGAAAAAGACTCTCCTGCTAACCTCAGTTTACGAGGTTACGAGGTTATTGATGAGATTAAGGAGCAACTCGAGAGCCAATGTCCCGGTGTTGTTTCTTGTGCTGACATTATTGCTATGGCTGCTAGAGATGCTGTCTTTTGGGCCGGGGGTCCGTTTTATGAGATACCGAAGGGAAGAAAGGACGGGAGCAGATCAAGAATCGAAGACACCGTCAATTTGCCTTCGCCTTTCTTAAATGCATCTCAGCTTATTAATACCTTTGCCCAACGCGGCTTCACTGCTCAGCAAATGGTCGCACTTTCTGGGGCGCATACATTGGGAGTGGCGAGATGCATATCGTTCAAAGGGAGATTGGACGGCAACGACCCTCTTTTGAGTCCAAACTTCGGAAGAGCGCTATCAAGAACATGCAGCAATGGCGACAACGCAGTACAAACATTCGACGCCACACCCGACAGCTTTGACAACGTGTATTACAACGCGCTATCGAGAGGCGCTGGAGTCCTGTTTTCCGACCAGACATTGTTTGCTAGCCCTCGTACGAGGGGCATTGTCACTGCCTACGCCATGAACCAAGCTTTATTCTTCATGGACTTTCAACAAGCCATCATCAAAATGGGCCTCCTCGATGTCAAAGAAGGTTATAGAGGCCAAGTTCGTCGCAACTGCCGTAGAGTTAATTGA 960 45.94 MIPMSASKWMSLVSIVLFLGVSLRFRGVNGLSMGYYLMSCPFVDPIVKNTVNRALQNDPTLAASLIRMHFHDCFVEGCDGSILIDSTRDNTAEKDSPANLSLRGYEVIDEIKEQLESQCPGVVSCADIIAMAARDAVFWAGGPFYEIPKGRKDGSRSRIEDTVNLPSPFLNASQLINTFAQRGFTAQQMVALSGAHTLGVARCISFKGRLDGNDPLLSPNFGRALSRTCSNGDNAVQTFDATPDSFDNVYYNALSRGAGVLFSDQTLFASPRTRGIVTAYAMNQALFFMDFQQAIIKMGLLDVKEGYRGQVRRNCRRVN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10467542 10472652 - ClCG04G002760.2 Cla04g00296 270524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00296 319 Gene3D Peroxidase, domain 2 166 298 - -
Cla04g00296 319 CDD secretory_peroxidase 30 318 IPR033905 GO:0004601|GO:0042744
Cla04g00296 319 PANTHER PEROXIDASE 47 19 317 - -
Cla04g00296 319 ProSiteProfiles Plant heme peroxidase family profile. 30 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PANTHER PEROXIDASE 25-RELATED 19 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 SUPERFAMILY Heme-dependent peroxidases 30 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 Pfam Peroxidase 47 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla04g00296 319 Gene3D - 35 319 - -
Cla04g00296 319 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00296 Cla-Chr4:10467542 Cla05g00838 Cla-Chr5:8305976 3.82E-95 dispersed
Cla04g00296 Cla-Chr4:10467542 Cla08g01404 Cla-Chr8:26939999 3.07E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00296 K00430 - csv:101202852 614.764