Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla04g00296 | ATGATACCAATGTCAGCGTCAAAATGGATGAGTTTAGTTAGTATTGTGTTGTTTTTGGGAGTAAGTTTAAGATTTAGAGGTGTAAATGGGTTGAGTATGGGGTATTACTTGATGAGTTGTCCCTTTGTGGATCCTATTGTGAAGAATACTGTTAATAGAGCTCTTCAAAATGATCCCACTTTGGCTGCTTCTCTCATTCGAATGCATTTTCATGACTGTTTCGTTGAGGGATGCGATGGTTCAATACTGATCGATTCGACACGAGACAACACAGCAGAAAAAGACTCTCCTGCTAACCTCAGTTTACGAGGTTACGAGGTTATTGATGAGATTAAGGAGCAACTCGAGAGCCAATGTCCCGGTGTTGTTTCTTGTGCTGACATTATTGCTATGGCTGCTAGAGATGCTGTCTTTTGGGCCGGGGGTCCGTTTTATGAGATACCGAAGGGAAGAAAGGACGGGAGCAGATCAAGAATCGAAGACACCGTCAATTTGCCTTCGCCTTTCTTAAATGCATCTCAGCTTATTAATACCTTTGCCCAACGCGGCTTCACTGCTCAGCAAATGGTCGCACTTTCTGGGGCGCATACATTGGGAGTGGCGAGATGCATATCGTTCAAAGGGAGATTGGACGGCAACGACCCTCTTTTGAGTCCAAACTTCGGAAGAGCGCTATCAAGAACATGCAGCAATGGCGACAACGCAGTACAAACATTCGACGCCACACCCGACAGCTTTGACAACGTGTATTACAACGCGCTATCGAGAGGCGCTGGAGTCCTGTTTTCCGACCAGACATTGTTTGCTAGCCCTCGTACGAGGGGCATTGTCACTGCCTACGCCATGAACCAAGCTTTATTCTTCATGGACTTTCAACAAGCCATCATCAAAATGGGCCTCCTCGATGTCAAAGAAGGTTATAGAGGCCAAGTTCGTCGCAACTGCCGTAGAGTTAATTGA | 960 | 45.94 | MIPMSASKWMSLVSIVLFLGVSLRFRGVNGLSMGYYLMSCPFVDPIVKNTVNRALQNDPTLAASLIRMHFHDCFVEGCDGSILIDSTRDNTAEKDSPANLSLRGYEVIDEIKEQLESQCPGVVSCADIIAMAARDAVFWAGGPFYEIPKGRKDGSRSRIEDTVNLPSPFLNASQLINTFAQRGFTAQQMVALSGAHTLGVARCISFKGRLDGNDPLLSPNFGRALSRTCSNGDNAVQTFDATPDSFDNVYYNALSRGAGVLFSDQTLFASPRTRGIVTAYAMNQALFFMDFQQAIIKMGLLDVKEGYRGQVRRNCRRVN | 319 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 10467542 | 10472652 | - | ClCG04G002760.2 | Cla04g00296 | 270524 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla04g00296 | 319 | Gene3D | Peroxidase, domain 2 | 166 | 298 | - | - | |
Cla04g00296 | 319 | CDD | secretory_peroxidase | 30 | 318 | IPR033905 | GO:0004601|GO:0042744 | |
Cla04g00296 | 319 | PANTHER | PEROXIDASE 47 | 19 | 317 | - | - | |
Cla04g00296 | 319 | ProSiteProfiles | Plant heme peroxidase family profile. | 30 | 319 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Plant peroxidase signature | 40 | 59 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Plant peroxidase signature | 64 | 84 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Plant peroxidase signature | 103 | 116 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Plant peroxidase signature | 122 | 132 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Plant peroxidase signature | 141 | 156 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Plant peroxidase signature | 187 | 199 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Plant peroxidase signature | 237 | 252 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Plant peroxidase signature | 253 | 270 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Plant peroxidase signature | 293 | 306 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PANTHER | PEROXIDASE 25-RELATED | 19 | 317 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | SUPERFAMILY | Heme-dependent peroxidases | 30 | 319 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Haem peroxidase superfamily signature | 62 | 76 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Haem peroxidase superfamily signature | 123 | 140 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Haem peroxidase superfamily signature | 141 | 153 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Haem peroxidase superfamily signature | 188 | 203 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | PRINTS | Haem peroxidase superfamily signature | 239 | 254 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | Pfam | Peroxidase | 47 | 282 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla04g00296 | 319 | Gene3D | - | 35 | 319 | - | - | |
Cla04g00296 | 319 | ProSitePatterns | Peroxidases active site signature. | 62 | 73 | IPR019794 | GO:0004601 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g00296 | Cla-Chr4:10467542 | Cla05g00838 | Cla-Chr5:8305976 | 3.82E-95 | dispersed | |
Cla04g00296 | Cla-Chr4:10467542 | Cla08g01404 | Cla-Chr8:26939999 | 3.07E-92 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla04g00296 | K00430 | - | csv:101202852 | 614.764 |