Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla04g00345 | ATGGCGGCCGCCACGGTCTCATTTTGGACAGTGAAGTATCTACCTGGATTCTCAGGTCCTCTTCCATTCCAACTCGAAACTGGATACGTGGGCGTGGGAGATTGGGAGGAAGTTCAATTGTTCTATTACTTCGTGAAGTCACAAGGAAATCCCCAAAAGGATCCTCTAATGACTTGGTACATCGGAGGCCCCGGGTGCTCTGCTTTAAATGGACTCTTTGAAGAAATTGGTCCTCTAAATTTCAAGTTAGAGTTATACAATGGAACCCTACCTCAGCTAATCTTGAATCCTCATACATGGGTTAAGAAAGCCAGTATATTATTTATAGACACACCTGTGTATAGTGGATTTTCATATAGTCGAACCCCACAAGGTTCTAAGAAAGGAGACTTTAGACAGATTGAACAAAATCATCAATTTTTGAGAAAGTGGTTCGAAGCTCATCCTGAATTTTTATCTAATCCCTTTTATGTTGGTGGAAGCTCATATTCTGGTATTATTGTTCCACCGATTACTCAAGCAATCTCAGAAGGAAATAAACATGTTGCTCCGGTTATAAACCTTCAGTTATTGACAAGTAATTGCAAAGGAGAATATGTGAAGATTGATCCAAATAATGTGGAGTGCTTGAAGTATATAGCAACCTTCAAAAAGTGTGTGGATGGAATCAATTGTTGGTGTATTTTGCTTCCTTTTTGTGTGGCTCCAATCCAAAGAATTGAACGGCGGAGATCTCTCTACAACACCTCTGAACTTGCTCCAAAAGCATTACCGGCTAATATATCTCTTGACTGTCTTGAGTATAAACACAACCTCAATTATTATTGGGCTAACGATGACCGAGTTCAGAAAGCACTACATATACGTGAGGGAACTATTAAAGAATGGGTAAGATGCAATATTACTGATGATTATGAATATGACCTTATGAGTGTTGTTCCTTATCATGCAAACCTCAGTTTAAAAGGTTATCGGTCTTTGGTTTTTAGTGGGGATCATGATATGACAGTGGCGACCATAAGCACTCAAACGTGGATTGAATCTCTAAATTATTCCATTGTTGATGATTGGAGACCTTGGTTTTCTATAGATGACCAAATACTCGGATACACAACAACATATGCAAATAACATGACATTTGTGACCATTAAAGGTGGAGGACACACACCGGAATACATGCCACACCAATGCGACGTAATGTTTAGCAGATGGATAAAAGGAGAAGCTTTATAA | 1233 | 39.17 | MAAATVSFWTVKYLPGFSGPLPFQLETGYVGVGDWEEVQLFYYFVKSQGNPQKDPLMTWYIGGPGCSALNGLFEEIGPLNFKLELYNGTLPQLILNPHTWVKKASILFIDTPVYSGFSYSRTPQGSKKGDFRQIEQNHQFLRKWFEAHPEFLSNPFYVGGSSYSGIIVPPITQAISEGNKHVAPVINLQLLTSNCKGEYVKIDPNNVECLKYIATFKKCVDGINCWCILLPFCVAPIQRIERRRSLYNTSELAPKALPANISLDCLEYKHNLNYYWANDDRVQKALHIREGTIKEWVRCNITDDYEYDLMSVVPYHANLSLKGYRSLVFSGDHDMTVATISTQTWIESLNYSIVDDWRPWFSIDDQILGYTTTYANNMTFVTIKGGGHTPEYMPHQCDVMFSRWIKGEAL | 410 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 12116642 | 12129238 | - | ClCG04G003290.1 | Cla04g00345 | 270573 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla04g00345 | 410 | Gene3D | - | 264 | 409 | - | - | |
Cla04g00345 | 410 | PANTHER | SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED | 192 | 408 | - | - | |
Cla04g00345 | 410 | PANTHER | SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED | 5 | 182 | - | - | |
Cla04g00345 | 410 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 192 | 408 | IPR001563 | GO:0004185|GO:0006508 | |
Cla04g00345 | 410 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 5 | 182 | IPR001563 | GO:0004185|GO:0006508 | |
Cla04g00345 | 410 | Pfam | Serine carboxypeptidase | 193 | 407 | IPR001563 | GO:0004185|GO:0006508 | |
Cla04g00345 | 410 | Pfam | Serine carboxypeptidase | 15 | 189 | IPR001563 | GO:0004185|GO:0006508 | |
Cla04g00345 | 410 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 144 | 169 | IPR001563 | GO:0004185|GO:0006508 | |
Cla04g00345 | 410 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 378 | 391 | IPR001563 | GO:0004185|GO:0006508 | |
Cla04g00345 | 410 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 109 | 119 | IPR001563 | GO:0004185|GO:0006508 | |
Cla04g00345 | 410 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 96 | 108 | IPR001563 | GO:0004185|GO:0006508 | |
Cla04g00345 | 410 | Gene3D | alpha/beta hydrolase | 8 | 243 | IPR029058 | - | |
Cla04g00345 | 410 | SUPERFAMILY | alpha/beta-Hydrolases | 10 | 408 | IPR029058 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g00345 | Cla-Chr4:12116642 | Cla05g02666 | Cla-Chr5:37847105 | 3.10E-155 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla04g00345 | K16296 | - | jre:109007256 | 458.373 |