Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00345 ATGGCGGCCGCCACGGTCTCATTTTGGACAGTGAAGTATCTACCTGGATTCTCAGGTCCTCTTCCATTCCAACTCGAAACTGGATACGTGGGCGTGGGAGATTGGGAGGAAGTTCAATTGTTCTATTACTTCGTGAAGTCACAAGGAAATCCCCAAAAGGATCCTCTAATGACTTGGTACATCGGAGGCCCCGGGTGCTCTGCTTTAAATGGACTCTTTGAAGAAATTGGTCCTCTAAATTTCAAGTTAGAGTTATACAATGGAACCCTACCTCAGCTAATCTTGAATCCTCATACATGGGTTAAGAAAGCCAGTATATTATTTATAGACACACCTGTGTATAGTGGATTTTCATATAGTCGAACCCCACAAGGTTCTAAGAAAGGAGACTTTAGACAGATTGAACAAAATCATCAATTTTTGAGAAAGTGGTTCGAAGCTCATCCTGAATTTTTATCTAATCCCTTTTATGTTGGTGGAAGCTCATATTCTGGTATTATTGTTCCACCGATTACTCAAGCAATCTCAGAAGGAAATAAACATGTTGCTCCGGTTATAAACCTTCAGTTATTGACAAGTAATTGCAAAGGAGAATATGTGAAGATTGATCCAAATAATGTGGAGTGCTTGAAGTATATAGCAACCTTCAAAAAGTGTGTGGATGGAATCAATTGTTGGTGTATTTTGCTTCCTTTTTGTGTGGCTCCAATCCAAAGAATTGAACGGCGGAGATCTCTCTACAACACCTCTGAACTTGCTCCAAAAGCATTACCGGCTAATATATCTCTTGACTGTCTTGAGTATAAACACAACCTCAATTATTATTGGGCTAACGATGACCGAGTTCAGAAAGCACTACATATACGTGAGGGAACTATTAAAGAATGGGTAAGATGCAATATTACTGATGATTATGAATATGACCTTATGAGTGTTGTTCCTTATCATGCAAACCTCAGTTTAAAAGGTTATCGGTCTTTGGTTTTTAGTGGGGATCATGATATGACAGTGGCGACCATAAGCACTCAAACGTGGATTGAATCTCTAAATTATTCCATTGTTGATGATTGGAGACCTTGGTTTTCTATAGATGACCAAATACTCGGATACACAACAACATATGCAAATAACATGACATTTGTGACCATTAAAGGTGGAGGACACACACCGGAATACATGCCACACCAATGCGACGTAATGTTTAGCAGATGGATAAAAGGAGAAGCTTTATAA 1233 39.17 MAAATVSFWTVKYLPGFSGPLPFQLETGYVGVGDWEEVQLFYYFVKSQGNPQKDPLMTWYIGGPGCSALNGLFEEIGPLNFKLELYNGTLPQLILNPHTWVKKASILFIDTPVYSGFSYSRTPQGSKKGDFRQIEQNHQFLRKWFEAHPEFLSNPFYVGGSSYSGIIVPPITQAISEGNKHVAPVINLQLLTSNCKGEYVKIDPNNVECLKYIATFKKCVDGINCWCILLPFCVAPIQRIERRRSLYNTSELAPKALPANISLDCLEYKHNLNYYWANDDRVQKALHIREGTIKEWVRCNITDDYEYDLMSVVPYHANLSLKGYRSLVFSGDHDMTVATISTQTWIESLNYSIVDDWRPWFSIDDQILGYTTTYANNMTFVTIKGGGHTPEYMPHQCDVMFSRWIKGEAL 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12116642 12129238 - ClCG04G003290.1 Cla04g00345 270573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00345 410 Gene3D - 264 409 - -
Cla04g00345 410 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 192 408 - -
Cla04g00345 410 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 5 182 - -
Cla04g00345 410 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 192 408 IPR001563 GO:0004185|GO:0006508
Cla04g00345 410 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 5 182 IPR001563 GO:0004185|GO:0006508
Cla04g00345 410 Pfam Serine carboxypeptidase 193 407 IPR001563 GO:0004185|GO:0006508
Cla04g00345 410 Pfam Serine carboxypeptidase 15 189 IPR001563 GO:0004185|GO:0006508
Cla04g00345 410 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 169 IPR001563 GO:0004185|GO:0006508
Cla04g00345 410 PRINTS Carboxypeptidase C serine protease (S10) family signature 378 391 IPR001563 GO:0004185|GO:0006508
Cla04g00345 410 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 119 IPR001563 GO:0004185|GO:0006508
Cla04g00345 410 PRINTS Carboxypeptidase C serine protease (S10) family signature 96 108 IPR001563 GO:0004185|GO:0006508
Cla04g00345 410 Gene3D alpha/beta hydrolase 8 243 IPR029058 -
Cla04g00345 410 SUPERFAMILY alpha/beta-Hydrolases 10 408 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00345 Cla-Chr4:12116642 Cla05g02666 Cla-Chr5:37847105 3.10E-155 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00345 K16296 - jre:109007256 458.373