Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla04g00444 | ATGGGTTCTTCTGTTGCTGCAATGGGCATGGTTTCAGACTCCAAATTCCATGTTCTTGCTGTTGATGATAGCGTTATCGATAGGAAATTGATTGAAAGGCTCCTTAAAACCTCCTCTTACCAAGTCACTACGGTTGATTCTGGAAGTAAAGCTTTGGAGTTTCTGGGATATGACCCTGGAAATAACTCGATTCCTTCTGTTTCATCTAACCATCATCATCATCATCAGGAAGTGGATGTGAATCTTGTTATTACTGATTACTGTATGCCTGAGATGACTGGCTATGATTTGTTGAAGAAGATCAAGGGGTCTACAGCTCTGAGAAACATACCTGTTGTGATTATGTCATCTGAGAATGTGCCTGCAAGAATCAATAGATGCTTAGAAGAAGGAGCAGAAGAATTCTTCTTGAAACCGGTCCGACTTTCGGATGTCAACCGGCTTAGACCCCACATGTTGAAAACCAAACTCAAATGTGGCAAACCAGAAAAAGCAGTAGAAAATGAGCCTGATTCAGGAAGCCAATCCCAAGCACTAGAGCAACAACATCAACAACGACATGAACAAGAACAATTACGACCGCTATCGCAGCAGATCCCGACATCGCTGCAAGATCAAGATGAATTGCAATCTGTACCACTTCTGCCAACACCAACACAGGAGCAAGAACAGTTGCAATTACTCCCGCCAACACCACCGCAACAATCAAACAACAACAAGAGGAAGGCAATGGAAGATGGACTTTCTCCCGATAGAACAAGGCCTAGATACAATGGTATTACCACCATGGTGTAG | 795 | 43.14 | MGSSVAAMGMVSDSKFHVLAVDDSVIDRKLIERLLKTSSYQVTTVDSGSKALEFLGYDPGNNSIPSVSSNHHHHHQEVDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSENVPARINRCLEEGAEEFFLKPVRLSDVNRLRPHMLKTKLKCGKPEKAVENEPDSGSQSQALEQQHQQRHEQEQLRPLSQQIPTSLQDQDELQSVPLLPTPTQEQEQLQLLPPTPPQQSNNNKRKAMEDGLSPDRTRPRYNGITTMV | 264 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 16664904 | 16666640 | - | ClCG04G004320.1 | Cla04g00444 | 270672 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla04g00444 | 264 | CDD | REC_typeA_ARR | 18 | 148 | - | - | |
Cla04g00444 | 264 | Pfam | Response regulator receiver domain | 18 | 144 | IPR001789 | GO:0000160 | |
Cla04g00444 | 264 | MobiDBLite | consensus disorder prediction | 215 | 264 | - | - | |
Cla04g00444 | 264 | MobiDBLite | consensus disorder prediction | 159 | 192 | - | - | |
Cla04g00444 | 264 | Gene3D | - | 17 | 249 | - | - | |
Cla04g00444 | 264 | MobiDBLite | consensus disorder prediction | 215 | 243 | - | - | |
Cla04g00444 | 264 | SUPERFAMILY | CheY-like | 14 | 148 | IPR011006 | - | |
Cla04g00444 | 264 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE | 11 | 262 | - | - | |
Cla04g00444 | 264 | ProSiteProfiles | Response regulatory domain profile. | 17 | 153 | IPR001789 | GO:0000160 | |
Cla04g00444 | 264 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 11 | 262 | IPR045279 | GO:0009736 | |
Cla04g00444 | 264 | SMART | REC_2 | 16 | 149 | IPR001789 | GO:0000160 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla04g00444 | Cla10g01535 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g00444 | Cla-Chr4:16664904 | Cla10g01535 | Cla-Chr10:30671838 | 2.60E-75 | dispersed | |
Cla04g00444 | Cla-Chr4:16664904 | Cla06g01631 | Cla-Chr6:29836743 | 1.89E-46 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60889 | PF00072 | Response_reg | 1.30E-18 | CL0304 | Cla | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla04g00444 | K14492 | - | csv:101220999 | 431.024 |