Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00521 ATGGCTGCTTACGCTTTGCTCGGCGATTCCACCCCCCGTGTTAATGGTGGTTTTGATGATAGTCCTTTGACCAGTGCTTCCACAAATAGCAACGGCAGTGACGAACATAATCATCAACAAATTGTTCAAGTTCAAGTCCAGGTTGCTCAACCGCGGTTGCCGGTTGGAAAAATGGTGCGGAAGAGAATCGCGTCGGAGATGGAGATTGAAGGCGGCGGCGGCGGTGGAGGAGGAGTTACTGCCGCTGTCCACCCTCGGTTTTGCCGGCGGAGTTTAGCTTCTGATCGTCCTTTTGCAGGTGGAGAAAATAAGGCGAATGCGAATGCGAATTATTGTTCTTCAAACCCTAGCCATGGCGGTGGTAACCACTCCACTGTGCATAATTTAACCGCTCTGACGTCAGTTGTAATCGAAGGGTCAAATTTATCAAATCCTCCTTCTGGTTCTGATGCTACGGTATCTTCCACTACCTCCAACAATAATCTTCTTGATAGTACTCTTCCTGTTCTTCGTCCTCAGCCCCACCATCACCATTTGCAGAATCCTGCAGTCTGTGGTTTTTCTGGGTTGCCTTTGTTTCCACCGGAATTAAATCACCACCACAAGTTAAATACTCGCAATAATCCTTTTCCCCTTCCTAATCCATCTCAGGTTCTTCATAATCCTCCCACTACTGCAACTACCTCCATTATCGCCGCCGCTTCTTCCCCTATGGATGATTCCTCCGCCACCGCTTGGATCGACGGCATCATTAAGGACTTAATCCATAGCTCCACCGCCATATCCATTCCTCAGCTCATTCAGAACGTTCGTGAGATTATCTACCCTTGTAACCCCAATCTTGCGAATCTTCTTGAGTTTCGTCTTCGTACTTTGACGGACCCTAGTGTTCCTAACTTCGCCGCTGAGGATCATCGCGTGAGGAAATCCCCCTTACCGTTGCCGCCGCCGGTGGCTGGGCTGGGGTTGCAGCAGAGGCAGTTCAACCAAGAGCAGCATGAGCAAGAACAGGATTGTTCTGGATTGAAGCTTAATCTCGATTCTTCTTCTCTGCATAATCTTCCTAATTTTCCCTCTCAACCGCCGTTTCATGAGCCGTATCTTCAATGGGGAACAACCCCTCCTCCGGTCCCCACTCCCTCCGCCGCTGCCGCCGGCGAGGATGCCTTACAGCGCCTCCCTGGTCATCATCAACTTAATCTCTCTTCCGTTACACCATCGCCGCTTGTTTCTCTAAACCATGTCCCTTCAAAGCCACAATCGGAACAGCAGAACTCCTGTCCGGTCAATGCAAAGGCAGCGGTGGCACAGCCAGCTCCAGCGCCACCGCCGTCCACGAGCAATAACCCTTCAGCAACTGCTTTGCTGATTAGAGAGATAAAAGAGGAGATGAGGCAACAGAAGAGAGACGAAGAAGGTTTACACCTCTTGACTTTGCTTCTTCAATGTGCAGAAGCAGTTTCTGCTGATAATTTAGAAGAAGCCAACAAGATGCTCTTGGAAATCTCCGAGTTATCAACACCGTTCGGCACATCGGCGCAGAGGGTCGCGGCGTATTTCTCAGAAGCAATGTCCGCGAGGCTTGTGAGCTCTTGTTTAGGCATATATGCAGCTCTGCCGCCGTCGTTGGTGCCTCATACACACAGCCAGAAAATAGCCTCAGCCTTCCAAGTCTTCAATGGCATAAGCCCATTTGTCAAATTCTCACACTTCACAGCCAATCAAGCCATACAAGAAGCTTTCGAAAGAGAAGAGAGAGTTCACATTATAGATCTAGACATCATGCAAGGCCTTCAATGGCCTGGCTTGTTCCACATCTTGGCATCTAGACCCGGCGGACCGCCCTACGTTCGGCTTACGGGGCTGGGGACCTCTCAGGAGGTTCTTGAAGCCACTGGCAAACGCCTCACTGAATTTGCCGAGAAGCTTGGCCTTCCCTTCGATTTCTTTCCTGTGGCTGATAAAATTGGCAATTTAGACTTGGAGAGGCTCAACGTGAGCAAAAGGGAAGCCGTTGCCGTCCATTGGATGCAACATTCTCTTTATGAAGTCACTGGTTCTGATTCCAATACGCTATGGCTTTTGCAAAGATTGGCTCCAAAAGTGGTGACGGTGGTGGAACAAGATCTGAGCCACACAGGGTCTTTCTTGGGGAGATTCGTAGAGGCCATTCATTACTATTCAGCACTGTTTGACTCATTGGGTGTGAGCTATGGCGAAGAGAGTGAAGAAAGGCACTTAGTTGAGCAGCAACTATTATCAAGGGAGATCAGAAATGTCCTCGCAGTCGGAGGGCCGTCGAGGAGCGGCGAAGTGAAGTTCCAAAACTGGAGAGAAAAGCTGCAGCAATCTGGGTTTAAAGGCATTTCCCTCGCCGGAAATGCTGCAACTCAAGCCACTCTCCTCCTCGGAATGTTCCCTTCCGATGGGTATACGCTTGTAGAAGACAATGGGACTCTGAAACTTGGGTGGAAGGATCTTTGTTTGCTCACAGCCTCGGCTTGGAAACCGCCGTTTCTTCATCATGCTGCGGCGGCTGCTGCACCGGCTGCCACCAACAACCACATTCCCCGGTGTGAACATGAAAGATTGAAAAATCGAGCCGATTGA 2610 50.04 MAAYALLGDSTPRVNGGFDDSPLTSASTNSNGSDEHNHQQIVQVQVQVAQPRLPVGKMVRKRIASEMEIEGGGGGGGGVTAAVHPRFCRRSLASDRPFAGGENKANANANYCSSNPSHGGGNHSTVHNLTALTSVVIEGSNLSNPPSGSDATVSSTTSNNNLLDSTLPVLRPQPHHHHLQNPAVCGFSGLPLFPPELNHHHKLNTRNNPFPLPNPSQVLHNPPTTATTSIIAAASSPMDDSSATAWIDGIIKDLIHSSTAISIPQLIQNVREIIYPCNPNLANLLEFRLRTLTDPSVPNFAAEDHRVRKSPLPLPPPVAGLGLQQRQFNQEQHEQEQDCSGLKLNLDSSSLHNLPNFPSQPPFHEPYLQWGTTPPPVPTPSAAAAGEDALQRLPGHHQLNLSSVTPSPLVSLNHVPSKPQSEQQNSCPVNAKAAVAQPAPAPPPSTSNNPSATALLIREIKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAALPPSLVPHTHSQKIASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSQEVLEATGKRLTEFAEKLGLPFDFFPVADKIGNLDLERLNVSKREAVAVHWMQHSLYEVTGSDSNTLWLLQRLAPKVVTVVEQDLSHTGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVEQQLLSREIRNVLAVGGPSRSGEVKFQNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWKPPFLHHAAAAAAPAATNNHIPRCEHERLKNRAD 869
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18740791 18745917 + ClCG04G005120.2 Cla04g00521 270749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00521 869 MobiDBLite consensus disorder prediction 139 168 - -
Cla04g00521 869 MobiDBLite consensus disorder prediction 351 383 - -
Cla04g00521 869 MobiDBLite consensus disorder prediction 399 451 - -
Cla04g00521 869 MobiDBLite consensus disorder prediction 17 37 - -
Cla04g00521 869 PANTHER PROTEIN SCARECROW 156 838 - -
Cla04g00521 869 MobiDBLite consensus disorder prediction 139 167 - -
Cla04g00521 869 MobiDBLite consensus disorder prediction 11 37 - -
Cla04g00521 869 MobiDBLite consensus disorder prediction 399 431 - -
Cla04g00521 869 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 156 838 IPR005202 -
Cla04g00521 869 Pfam GRAS domain family 477 836 IPR005202 -
Cla04g00521 869 ProSiteProfiles GRAS family profile. 467 836 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla04g00521 Cla10g01611 CCT
Cla04g00521 Cla10g01611 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00521 Cla-Chr4:18740791 Cla07g01035 Cla-Chr7:26793212 4.85E-160 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60895 PF03514 GRAS 8.20E-127 CL0063 Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00521 - - bhj:120074183 1470.29