Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00530 ATGCTCATTTTTTCTTATTACATAGTGCCCCTTCGATATAAAATTCCTGGATTCACCACTGGTCTTGTGTCAAGAGAGCTGGATCCGACTCCCGAAGCACCGCAGTCCTTGAAGGCTCCCGCTGCCTCCAATTCCACCGGAAACGGTCAGATCCGTTACCGATCTCCGTCTTCCGCCGAGCTTCTTGAAGGCCAATCCGCCTCTCTTCCACTTCAAGATCAACAGAAGCTACTTCAGTTGGAATTTGACAAGATGCATAAACGTTCCGGGAAGCAACAGTCGGAATCGTTGTCTAACAAGATCTATAGATTCAGAGGGGTGTTGTTGCTTACCTCTCTTTCTCTTTTCTTAATCGCCTTTGTTCTTTATCTCATGCCGGCCCGTGAGGATTACTCCTTCAACCACCGCAAAGTTTCCCCTGATCACAGGTCTTCTTCTTCCAAGACTTCTTTTGCTGTTATTTTTGATGCTGGTAGCTCTGGGAGTCGTGTCCATGTCTTTTGCTTTGATCATAATCTCGATCTCCTCCCCGTTGGCAAGGATATCGAACTTTTCGAACAACTTAAACCAGGACTGAGTGCATATGCTGACAGCCCCAAGGATGCTGCAGCATCTCTAATTTCCCTCTTGGACAAAGCTCAAAACGTGGTTCCAAAAGGGCTGCGGCCAATGACCCCCGTTAGAGTTGGGGCAACTGCTGGCTTGAGGGCTCTGAAAGGTGATGCATCTGATAGAATTCTGCAGGCGGTGAGGGATCTCCTGAGAGACAAAAGTGACCTCAGGTTGGAGGGAGATGCCGTCTCTGTGATTGATGGAACTCAAGAAGGTTCTTACCTTTGGGTGACGTTAAACTATCTGCTTGGGAACTTGGGTAAGAAATATTCGGATACAGTTGGAGTTGTAGATCTTGGTGGAGGATCTGTTCAAATGGCATATGCTATCTCGGAAAAGGATGCTGCTCGATTATCAGATGCCGAGAGTGCATACGTCAAAAAGATGTATCTGAAGGGAGCAACTTACTATCTCTATGTTCACAGTTATTTGCATTATGGGTTACTAGCTGCTCGAGCAGAGGTTTTGAGTGTCTCTGAAGATTCTAGCAATGATTGCATCCTATCTGGCTACGAAGGTGAATACCATTACGGAGGAAAGGACTACAAAGCATCTGCCTCTTCATCAGGGTCTAGCTTGAATGGATGCAGGAGTTCAGTTTTGAAGGCCCTCAAGGTTAATGAATCCACATGTACTCACATGAAGTGCACTTTTGGTGGTGTTTGGAATGGCGGAGGAGGAGACGGCCAGAAGAATCTCTTCGTTGCTTCATTTTTCTTTGACAGGGCGGCTGAGGCTGGTTTTGCTGACCCCAATAAGCCGGTTGCTAAAGTTCGCCCAGCAGACTTCAATGATGCAGCGAAGCAGGCATGCCAAATCAAAGTCGAGGACGCCAGTACATATCCCAATGTCGAGAAGGATAACCTGCCGTATTTGTGTATGGATCTTGTGTATCAGTACACACTCCTTGTAGATGGATTCGGGCTGGATCCCTGGCAAGAGATCACATTGGTGAAGAAGGTTAAATATCAGAACTCCTTGGTGGAAGCAGCATGGCCTCTAGGCAGTGCCATCGAAGCTGTCTCGTCGTTAGCCTAA 1650 47.21 MLIFSYYIVPLRYKIPGFTTGLVSRELDPTPEAPQSLKAPAASNSTGNGQIRYRSPSSAELLEGQSASLPLQDQQKLLQLEFDKMHKRSGKQQSESLSNKIYRFRGVLLLTSLSLFLIAFVLYLMPAREDYSFNHRKVSPDHRSSSSKTSFAVIFDAGSSGSRVHVFCFDHNLDLLPVGKDIELFEQLKPGLSAYADSPKDAAASLISLLDKAQNVVPKGLRPMTPVRVGATAGLRALKGDASDRILQAVRDLLRDKSDLRLEGDAVSVIDGTQEGSYLWVTLNYLLGNLGKKYSDTVGVVDLGGGSVQMAYAISEKDAARLSDAESAYVKKMYLKGATYYLYVHSYLHYGLLAARAEVLSVSEDSSNDCILSGYEGEYHYGGKDYKASASSSGSSLNGCRSSVLKALKVNESTCTHMKCTFGGVWNGGGGDGQKNLFVASFFFDRAAEAGFADPNKPVAKVRPADFNDAAKQACQIKVEDASTYPNVEKDNLPYLCMDLVYQYTLLVDGFGLDPWQEITLVKKVKYQNSLVEAAWPLGSAIEAVSSLA 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18882698 18895122 - ClCG04G005210.2 Cla04g00530 270758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00530 549 Gene3D Exopolyphosphatase. Domain 2 271 526 - -
Cla04g00530 549 CDD NBD_sugar-kinase_HSP70_actin 153 333 - -
Cla04g00530 549 Pfam GDA1/CD39 (nucleoside phosphatase) family 145 547 IPR000407 GO:0016787
Cla04g00530 549 PANTHER APYRASE-LIKE PROTEIN 86 547 - -
Cla04g00530 549 Gene3D - 151 542 - -
Cla04g00530 549 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 270 285 IPR000407 GO:0016787
Cla04g00530 549 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 86 547 IPR000407 GO:0016787
Cla04g00530 549 MobiDBLite consensus disorder prediction 29 50 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01061 Cla-Chr3:20355022 Cla04g00530 Cla-Chr4:18882698 6.56E-169 dispersed
Cla04g00530 Cla-Chr4:18882698 Cla11g00701 Cla-Chr11:9054736 2.30E-42 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00530 K14641 - csv:101220305 865.144