Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00601 ATGGGTGTCCACCATCCAAAAGGCCCCAAAAAGAGTAGAGTTGTCATTTGCAGTTCACTTACTGTTCAATCTTATTATTACACACACCCACATTCAAATTTCACTCCCACTTCTGTTCTCTTCTCACTCCACCGCAATAATGGCCGCACCCAACTCACCCCCAGTGGAGAAGAGCCGGAATGGCCCTTAACCCACTTTGCCGGCATTGTTCCCGATGGGGAAAAACGACGGAGAACAGTCACTGCCGTCCGCCATCGACTCCAGGCCGTCCGGCCAGGCTGCCGATGGCCGATGCTCTTGTGGGTGTGTTTCGATTCGAAGCTTCATTGGCTTCAGATGCATCTTCATTCTGCTATTGTCCGTTGCCTTGTTCATTTCTGCTATCAGAAGGATCTGGGTCTTAATTCATCGTATCGAGGTCATGATATAGTAGCAACATTCAATGTTGAGAGACCGGTTTCTTTGCTGGAAGACAATATCGAGCAACTTCGAACCGACATTTTTGAAGAGTTCCCTATACCTTCTATCAAAGTGGATATACTATCTCTAGAACTATTATCTGGATCAAACCGTACAAAAGTTGTGTTCAGCCTCGATCCAGATGGCGATGACTTGGAAATCTCATCAACTTATCTAAGTTTAATCAGGTCAACCATTGCAAGTCTAGTAACGAATCAGTTCCTCCGCATTACTAAGTCCATGTTTGGGGAGGCCTTATCGTTTGAAGTACTGAAATTCCCCGGAGGAATAACGATAATCCCGCCACAGAGTGCATTTCTTTTGCAGAAAGTGCAGATTCTTTTCAACTTTACATTGAACTTCTCTATTCATCAGATTCAAGTACATTTCAGTGAACTTACCAGCCAACTGGAGGCGGGATTACGACTAGCTCCATATGAGATTTTATATATTAAGTTGTGGAATGGGGAAGGTTCGACTGTGACTGCCCCTACGATTGTCCAGTCGTCTGTACTTCTTGAAGTTGGAAATACTCCATCAATGCGACGGCTGAAGCAGCTAGCTCAAACAATCTCAGGTTCTAATTCTAGCAACCTTGGCCTGAATAATACGGAGTTTGGAAAGGTGAAGCAAGTTCGCCTTTCGTCAATTCTTAAACACTCCCTCAATGGCAGTGATGGGAACGGCCCCTCAAGGTCACCTTCTCCTGCTCCTACACCCCAGCCCCATAACTACCATCATCCCCCGACTCACCACCACCACCACCGTCACACTCCTCTAACCCCTGCAATTTCACCTGCCCCTGCAACCGAGAAGGGTGCATCAGAATACGGTTCACCTGCCCCTGAAAGAAGCGCAGCATCACCTAAGCGAAGTTACACGGCAAGGCCGCCTGGTTGTCAATATAGATACAAGAGGAAGTCTGGTAGGAAAGAAGGAAAGCAATCTCACTTAACCCCGCTTGCTTCACCCAATATATCTCCTGAGCATTCTGCTGCATCGCCATCATCACTGCCACGACATCAAGTAAACCCGCCAGCAGCACCCGTCGCTCCAGCTCCGGCATTAACTCCATTGCCAAACGTCATTTACGCTCATGTTCAACCACCTTCCAAAAGTGACTCCAGCCACCAGGAAAAATCCACGACAAATCCATCAGTTGCATCATCTCCATCTCCATCTGGTGCTGATCGTCGTCATATGATCACTCAATGGGGATTCACACTGTTTCTTATTCTCGCACGCTATATGTAA 1713 47.05 MGVHHPKGPKKSRVVICSSLTVQSYYYTHPHSNFTPTSVLFSLHRNNGRTQLTPSGEEPEWPLTHFAGIVPDGEKRRRTVTAVRHRLQAVRPGCRWPMLLWVCFDSKLHWLQMHLHSAIVRCLVHFCYQKDLGLNSSYRGHDIVATFNVERPVSLLEDNIEQLRTDIFEEFPIPSIKVDILSLELLSGSNRTKVVFSLDPDGDDLEISSTYLSLIRSTIASLVTNQFLRITKSMFGEALSFEVLKFPGGITIIPPQSAFLLQKVQILFNFTLNFSIHQIQVHFSELTSQLEAGLRLAPYEILYIKLWNGEGSTVTAPTIVQSSVLLEVGNTPSMRRLKQLAQTISGSNSSNLGLNNTEFGKVKQVRLSSILKHSLNGSDGNGPSRSPSPAPTPQPHNYHHPPTHHHHHRHTPLTPAISPAPATEKGASEYGSPAPERSAASPKRSYTARPPGCQYRYKRKSGRKEGKQSHLTPLASPNISPEHSAASPSSLPRHQVNPPAAPVAPAPALTPLPNVIYAHVQPPSKSDSSHQEKSTTNPSVASSPSPSGADRRHMITQWGFTLFLILARYM 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20139635 20144528 - ClCG04G005900.2 Cla04g00601 270829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00601 570 PANTHER F20B24.21 127 566 - -
Cla04g00601 570 Coils Coil 566 570 - -
Cla04g00601 570 MobiDBLite consensus disorder prediction 521 550 - -
Cla04g00601 570 MobiDBLite consensus disorder prediction 471 494 - -
Cla04g00601 570 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 127 566 - -
Cla04g00601 570 MobiDBLite consensus disorder prediction 373 507 - -
Cla04g00601 570 MobiDBLite consensus disorder prediction 519 551 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla04g00601 Cla10g01555 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00601 Cla-Chr4:20139635 Cla05g01047 Cla-Chr5:10773652 2.64E-42 dispersed
Cla10g01555 Cla-Chr10:30955961 Cla04g00601 Cla-Chr4:20139635 1.33E-102 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00601 - - bhj:120073837 730.324