Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00639 ATGAAGGAAATTCATAAATCCCGTCTTGCATTTGCATTTGCTTCTATCTCTGTTTTCGTTTGCTTGTTCTTCGATGTCCATGTGGTTTTAGCAGACAATTACATCCCTCGGGATTTCATCCTCCTTGATTGTGGAGGGCCTTCAACTGCTAACGACATCGATGGCCGGAAATGGTATACCGATGACAAATCTAAGTTTGTTCCGGCGACAGGGAATAGCATCGTATCGAAAGCCGCTACTCAGGATCCTTCAGTTCCTGATATCCCTTTCATGACGGCTAGGGTTTTCAGTTCTAATTTCACCTACAGCTTTCCTGTGGCTCCTAGTCGTTTATTCGTTCGTCTCTACTTTTATCCTTCTTCTTATGGTGGACTTAATGCATCTGATGCTCTTTTCTCTGTTTCCACTCCGTCCTATACTCTTCTTAAGAACTTCAGCGCTTCACAAACTGCTGAGGCTTTGAATTATGCCTATATCATTAAGGAATACTCTATCCATGTTGATGGTGATAGGTTAAACTTGACTTTCATTCCATCCTCCAGTCATCCAAAGGCTTATGCATTTGTGAACGGGATTGAGATTGTATCTATGGCTGATATTTACAGTGATACTTCTGGGAGTACTCTGATTGTTGGCCCATCTACTCCATTCACTGTGGACAATGCCACTGCGCTTGAGAATGTTTATCGGTTGAATGTCGGGGGGAATGATATTTCACCTTCTGGTGATACGGGGATGTATAGGTCTTGGTTTGATGACACTCCATACTTGTATGGTGCAGCACAGGGAGTGACGATGAGTACTGATCAGAACACAACGCTTAATTATCTGCCGAATATTCCTACTTATGTTGCGCCGGAAAATGTCTACTCCACTGCTAGAGCAATGGGACCTGATAACAATGTCAATCTGAATTATAACTTGACATGGATTTTCCCTGTTGACACTGGGTTCTTTTATCTTGTTAGGCTCCATTTTTGTGAGGTTGCTGCAAATATCACAAAAATTAACCAAAGAGTTTTCGACATTTTCCTCTTTAATCAAACTGCTATGCAGGGTGCTGACGTGATTGCCTGGGCTGGAAGTAATGATACTCCTGTGTACAAAGATTATGTGGTTTTCGTTCCTGCTAATGGAAGTCCGCAGCAGGATTTATGGCTCGAACTCCATCCAGACAAGTCCATGGTCCCCAATTACTATGATGCAATCTTGAATGGTGTGGAGATATTCAAAATTAATGACTCGAGCGCTAATCTTGCTGGGCCAAATCCTATTCCTGCGCCAGTACAGAAAATTATTGATCCATCATTAGCTAAGCCAGCATCTTCTCATGGTAAATCAAAGAAGTCAGGGGTGATTGCTGGAGTTGTTTGTGGAGCAGTTGTTTTAGCTCTGATCATTGGTTTCTTTGTTGTTGCTAAACGTCGCCATGGGCATGGGAAAGATTCAAGTACTGTTGAAGGACCGTCAGGATGGCTACCTCTTTCTCTCTATGGAAATTCCCATTCGGCTGGATCTGCTAAGACAAATACAACTGGAAGCTATACATCCTCCCTGCCTTCCAATCTTTGCCGCCACTTCTCGTTTTCTGAGATCAAGGCTGCCACAAGGGACTTTGATGAATCTTTACTACTTGGAGTTGGTGGTTTTGGCAAAGTTTACAAGGGAGAAATTGATGGTGGGACTACAAAAGTTGCCATCAAGCGAGGGAACCCTCTTTCCGAGCAAGGTGTGCATGAATTTCAAACTGAGATTGAAATGCTCTCTAAGCTTCGCCATCGCCACCTTGTTTCATTGATTGGCTACTGTGAAGAGAATTGTGAAATGATCCTGGTTTATGATTACATGGCTCATGGAACACTGCGAGAACATCTATACAAGACTCACAAGCCACCGTTGTCTTGGAGGCAAAGGCTCGAGATATGCATTGGAGCTGCCCGTGGTCTGCATTATCTCCACACTGGTGCCAAGTATACGATTATTCATCGAGATGTGAAGACAACCAACATCCTTTTGGACGAAAAGTGGGTAGCAAAAGTATCTGATTTCGGGTTGTCGAAAACTGGTCCTACTTTGGATCACACACATGTTAGCACTGTTGTGAAAGGTAGTTTTGGATACTTGGATCCTGAATACTTTAGGCGACAGCAATTGACCGACAAATCAGATGTTTACTCCTTCGGAGTCGTTCTCTTTGAAGTCCTATGTGCTCGGCCAGCCTTGAACCCAACACTCCCCAAGGAGCAAGTGAGTTTAGCCGAATGGGCTGCACACTGCTACAACAAAGGCATTTTAAATCAGATAATCGACACATTCCTAAAGGGGAAGATCGCATCGGAGTGTCTCAAGAAGTTCGCCGAGACAGCAATGAAATGTGTGTCTGATCAGGGCATCGACAGGCCATCAATGGGCGATGTTCTCTGGAATCTAGAGTTTGCATTGCAGCTGCAGGAGAGCGCAGAAGAGAGTGGCAAGGTAGGCAGTGGGATAGAAGTGGAAGGAGGTCAGCTCGACGTAGTTTACAAAGGGAAGAAGGATCCAGACGCTTCCCCTGGCATCGATGGAAACATAACCGACTCAAGAAGCACCGGAATCAGTATGAGCATTGGAAGCCGGAGTCTTGCCAGTGAAGATTCGGACGGGTTGACGCCAAGTGCCGTCTTCTCACAGATTATGAACCCAAAAGGTCGTTAA 2694 44.54 MKEIHKSRLAFAFASISVFVCLFFDVHVVLADNYIPRDFILLDCGGPSTANDIDGRKWYTDDKSKFVPATGNSIVSKAATQDPSVPDIPFMTARVFSSNFTYSFPVAPSRLFVRLYFYPSSYGGLNASDALFSVSTPSYTLLKNFSASQTAEALNYAYIIKEYSIHVDGDRLNLTFIPSSSHPKAYAFVNGIEIVSMADIYSDTSGSTLIVGPSTPFTVDNATALENVYRLNVGGNDISPSGDTGMYRSWFDDTPYLYGAAQGVTMSTDQNTTLNYLPNIPTYVAPENVYSTARAMGPDNNVNLNYNLTWIFPVDTGFFYLVRLHFCEVAANITKINQRVFDIFLFNQTAMQGADVIAWAGSNDTPVYKDYVVFVPANGSPQQDLWLELHPDKSMVPNYYDAILNGVEIFKINDSSANLAGPNPIPAPVQKIIDPSLAKPASSHGKSKKSGVIAGVVCGAVVLALIIGFFVVAKRRHGHGKDSSTVEGPSGWLPLSLYGNSHSAGSAKTNTTGSYTSSLPSNLCRHFSFSEIKAATRDFDESLLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTLREHLYKTHKPPLSWRQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLPKEQVSLAEWAAHCYNKGILNQIIDTFLKGKIASECLKKFAETAMKCVSDQGIDRPSMGDVLWNLEFALQLQESAEESGKVGSGIEVEGGQLDVVYKGKKDPDASPGIDGNITDSRSTGISMSIGSRSLASEDSDGLTPSAVFSQIMNPKGR 897
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20781889 20784582 - ClCG04G006295.1 Cla04g00639 270867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00639 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Cla04g00639 897 Pfam Malectin-like domain 42 412 IPR024788 -
Cla04g00639 897 PANTHER - 24 863 - -
Cla04g00639 897 ProSiteProfiles Protein kinase domain profile. 539 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla04g00639 897 MobiDBLite consensus disorder prediction 843 897 - -
Cla04g00639 897 CDD STKc_IRAK 545 811 - -
Cla04g00639 897 Gene3D Transferase(Phosphotransferase) domain 1 616 829 - -
Cla04g00639 897 SMART serkin_6 539 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla04g00639 897 Pfam Protein tyrosine and serine/threonine kinase 545 807 IPR001245 GO:0004672|GO:0006468
Cla04g00639 897 PANTHER OS07G0166700 PROTEIN 24 863 IPR045272 GO:0004714|GO:0006468
Cla04g00639 897 ProSitePatterns Protein kinases ATP-binding region signature. 545 568 IPR017441 GO:0005524
Cla04g00639 897 Gene3D - 224 413 - -
Cla04g00639 897 Gene3D - 39 198 - -
Cla04g00639 897 Gene3D Phosphorylase Kinase; domain 1 524 615 - -
Cla04g00639 897 MobiDBLite consensus disorder prediction 855 890 - -
Cla04g00639 897 SUPERFAMILY Protein kinase-like (PK-like) 512 812 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00639 Cla-Chr4:20781889 Cla07g01515 Cla-Chr7:32347396 0 dispersed
Cla11g01292 Cla-Chr11:26481206 Cla04g00639 Cla-Chr4:20781889 1.10E-178 dispersed
Cla04g00632 Cla-Chr4:20628995 Cla04g00639 Cla-Chr4:20781889 1.04E-71 proximal
Cla02g01647 Cla-Chr2:31260831 Cla04g00639 Cla-Chr4:20781889 0 transposed
Cla06g01154 Cla-Chr6:24605286 Cla04g00639 Cla-Chr4:20781889 3.41E-64 transposed
Cla11g00458 Cla-Chr11:5188945 Cla04g00639 Cla-Chr4:20781889 0 transposed
Cla03g00002 Cla-Chr3:56181 Cla04g00639 Cla-Chr4:20781889 7.69E-77 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80489 PF12819 Malectin_like 4.80E-40 CL0202 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00639 - - csv:101211171 1680.23