Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla04g00644 | ATGATAAGAGAAGACGGTGCCGTATTCAGCGAACCAGACAGCCATCGGATCGATCCATGGAAACCAAACCACAGCATCATATTCAATCAAACACAAACCCATTTCCAGTTGCATAGCTTCCTTTTCGAATTGGTGTGCATTGAAGGGGCCTCTGATCTCTCTGCTTCTCTACTTTCTTTCATCAATTCCGAGACGATAACCCTTCTCTTTCATACCCTTCTTACAGGTAGTGTTATTATTTTGGATCCACGAGAGGGCGTTGTCAATACTTCGTCGAATCGAGCTATTTCTGTGGGCCTCTGTTGGAAACTTGAAAGGCCGGTCTCTGATCTGATTTTTTCTTGCGTTGTCCGAGGGAAAGGCAGGTGTTTGAATGTGTCGCCATTGCTAAGCCCCTCCATTATATTTCACTATCTTCTTCACTCCCAGGCAGAGGGATTTTTTCCCTTGCTGGCTTCATCAGATTCTCCATCAGTTATTGAATACAGATCCCCATCTCGAAATCGTGGTTCCGTTGGTTGTCTATGTCGCAGTGCTTCCTTCACCTCTTCCAGTTACGACGATGCTCAGAGTGACATTGTGGATGTGAAGGAAAACTGCACCAGCCCTTTTGGAGATAACGGTTGGAGTAGTGAGAATTGCCTCAGACGGTCCACTTCGCTTTCTAGAAAGAGGCAGTTTTATACTGTTGGCTCTCTGTTTCCTCAGCAGTTTCCTTTTGGCTACCCCACCCAGGATAGAAGACGCCTGGTCTCGTGGGGTGCAATGGAGTTGCATAATGATGACCCTGCAAGCTTTGAACTTACTAGGGTCCAGGAGAAGTTGCATAAGGCGCAAAGAAGTCGTCATAAGAGCATACAGTTTGATGATAATTTACAACATGACGATAATCCAAGGTTGATATACATCAATGATCCAAGGAGAACTAATGACAAGTATGAGTTCACAGGAAATGAGATAACCACCAGCAAGTACACATTGATTACCTTCTTGCCAAAGAACCTCTTTATTCAGTTCCACCGTGTAGCATATCTTTATTTTCTTGCCATTGCAGCTCTTAACCAGCTTCCACCTTTGGCAGTCTTTGGGAGAACAGTATCTCTTTTTCCCCTTCTGTTTGTGCTCTGTGTTACAGCTATTAAAGATGGCTACGAAGATTGGCGTAGACACAGATCTGATCGCAATGAGAACAATAGACAGGCTCTGGTGTTTCAATCTGATGATTTCCGATTGAAAGTATGGAAAAAAATACGAGCAGGTGAAGTTGTAAAGATTTGTGCTGATGAGGTCATTCCTTGTGACATGGTTTTATTGGGGACAAGTGATCCCAGTGGCCTTGCTTACATCCAAACGATGAATTTGGATGGTGAGTCAAACTTGAAGACAAGGTATGCTAGGCAGGAAACAGCATCTGCAGTAGCCGAGGGATGTTCATATTCTGGTCTTATTCGATGTGAACAACCTAATAGGAACATTTATGAGTTCACTGCCAATATGGAGTTCAACGGTCATAAATTTCCCCTCAGCCAGTCAAACATAGTCTTGCGTGGTTGTCAGCTAAAGAACACTGAATGGATTATTGGGGTGGTTGTCTATGCTGGACAAGAGACAAAAGCCATGCTAAACAGTGCAATGTCTCCTGCCAAGCGAAGTAAACTGGAGGGTTACATGAACAGGGAAACATTGTGGTTGTCAATTTTCCTCTTTATCATGTGTCTAGTTGTGGCCCTTGGAATGGGCTCATGGCTCGTTCGGCACAAGGAACGGCTTGATACCTTGCCATATTATAGGAAAAGGTATTTCACTAATGGGGCAGATGATGGTAAGAGGTACAGGTTTTATGGAATTCCTATGGAGACATTTTTCTCCTTTCTGAGTTCTATTATAGTGTTTCAGATCATGATACCGATATCCCTTTATATTACGATGGAGATGGTGAGACTAGGCCAGTCATATTTCATGATTGAAGATAAGCACATGTACTGCAGAATCTCTTCCTCAAGGTTCCAGTGCAGATCGTTGAATATCAATGAGGATCTTGGTCAAGTTCGCTATGTATTTTCTGATAAAACAGGAACACTTACTGAAAATAAAATGGAATTTAAAAGAGCAAGCGTGCACGGGAAGAATTACGGGAACAACTTGTCTGAGGAATATTCATCGATGTTGTATTCCATCCCAGCAACTTTAGGGAGGAGGAGGTGGAAACTTAAATCTGAAGTTGCTGTTGATACCGAACTTGTCAAATTATTGCACAAGGGCCTAAACGGAGATGAAAAGATTGCTGCACATGAATTTTTTCTTACATTGGCTGCATGCAATACTGTAATTCCTATTCACATGGATGACAAATCTAATTATGCAAATGGCGAATTGCACGAGGATTTTGAAACTATTGATTATCAGGGGGAATCCCCTGACGAGCAAGCACTAGTTGCTGCAGCCTCCGCTTATGGATATACCCTTTTTGAGCGCACGTCGGGGCATATCGTTATTGATGTCAATGGTGAGAACTTAAGGTTAGACGTTTTGGGTTTACATGAGTTCGATAGTGTTCGCAAAAGAATGTCTGTCGTCATCAGATTCCCCGACAACACTATAAAGGTTCTGGTAAAAGGTGCCGATACTTCAATGTTGAGTATTTTAGGCATTGACTATGATAGGGAAGAATTTATCAAGCATACTACTCAGAGCCATTTGGGTGAATATTCAATGGAAGGTTTGCGAACACTTGTAGTTGCTGCCAGAGATCTGAAAGATTCTGAATTTGAGTTGTGGCAGACCAGATATGAGGATGCTAGTACTTCACTGACTGAAAGAGCAGTAAAACTACGTCAGACAGCAGCCCTTATAGAATGTGATCTAAAGCTTTTGGGTGCAACCGCGATTGAGGACAAACTTCAAGATGGTGTACCTGAAGCCATTGAATCTCTTCGGCAGGCAGGAATAAAGGTTTGGATTCTGACTGGAGATAAGCAGGAGACAGCCATATCAATCGGTCTCTCCTGCAAACTGCTGACTTCTGATATGCAGTCAATAATTATCAATGGAAATTCCGAGAATGATTGCAGGCAACTTTTAGCTGATGCTATGGAAAAATATAGTATTAAATCAACACAGTGCGGAAGTCAAAGACCGAATCATAAGAACTGTGAGAATGAATGTCATGATTTACCAAAGACATCTAGTATGTCAGATTTTAACGAAGGGAAAGAAGACCTGACTGATAAACCACTAGCTCTAATAATTGACGGAAACAGTTTGCTTTTTGACCTTGCAACTTCATGCGATGTTGTGCTATGTTGTCGTGTCGCTCCTCTGCAGAAAGCTGGAATTGTTGATTTGATCAAGAGTAGAACTGATGATATGACATTGGCAATTGGTGATGGGGCCAATGATGTCTCAATGATTCAGATGGCCGATGTAGGTGTTGGTATATGTGGACAGGAGGGGCGTCAAGCAGTAATGGCATCTGATTTTGCCATGGGACAATTTCGCTTTCTAAAAAGATTGCTTCTAGTGCATGGACATTGGAACTATCAACGTGTAGGCTACATGGTTCTTTACAACTTCTACCGCAATGCTGTTTTCGTCTTGATGCTCTTCTGGTACATTCTATGCACGGCATTCTCAACAACTTCAGCTTTGACCGATTGGAGTAGTGTGTTTTACTCTGTTATTTATACTTCTATCCCTACTATTTTTGTTGACTTGAGTGACAAAACTCTACTCCAATATCCTAAGCTGTATGGTGCTGGCCATAGACAGGAGGCATACAATTTGCGTCTCTTTTGGTTCACAATGATTGATACCCTGTGGCAGAGTCTTGTTCTCTTCTATGTCCCATTATACATTTACAAGGAGAGTACCATTGATATATGGAGCTTGGGAAGTTTGTGGACGATAGCGGTTGTTATCCTTGTGAACGTACACTTGGCGATGGATGTTCAACGTTGGGTATATATTACACATGCTGCCGTCTGGGGATCCATAGTCATAACATATGCCTGCATGGTGGTGTTGGATTCGATACCGGACGATCTTTCATCTTGCCAAGTCCCCAACTTACTGGCTAACTATATTGCTCATAATAGTTGTAGCATTGCTTCCACATTTTGGCCCTCGGATATTCAGATAGCCAGAGAAGCTGAGGTGCTGAGAAAACGAAAAGGTCGTGAACAAATGGGCTCAAAGCGAGATCGAGATTCCAATTAA | 4215 | 42.44 | MIREDGAVFSEPDSHRIDPWKPNHSIIFNQTQTHFQLHSFLFELVCIEGASDLSASLLSFINSETITLLFHTLLTGSVIILDPREGVVNTSSNRAISVGLCWKLERPVSDLIFSCVVRGKGRCLNVSPLLSPSIIFHYLLHSQAEGFFPLLASSDSPSVIEYRSPSRNRGSVGCLCRSASFTSSSYDDAQSDIVDVKENCTSPFGDNGWSSENCLRRSTSLSRKRQFYTVGSLFPQQFPFGYPTQDRRRLVSWGAMELHNDDPASFELTRVQEKLHKAQRSRHKSIQFDDNLQHDDNPRLIYINDPRRTNDKYEFTGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRQALVFQSDDFRLKVWKKIRAGEVVKICADEVIPCDMVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETASAVAEGCSYSGLIRCEQPNRNIYEFTANMEFNGHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAMSPAKRSKLEGYMNRETLWLSIFLFIMCLVVALGMGSWLVRHKERLDTLPYYRKRYFTNGADDGKRYRFYGIPMETFFSFLSSIIVFQIMIPISLYITMEMVRLGQSYFMIEDKHMYCRISSSRFQCRSLNINEDLGQVRYVFSDKTGTLTENKMEFKRASVHGKNYGNNLSEEYSSMLYSIPATLGRRRWKLKSEVAVDTELVKLLHKGLNGDEKIAAHEFFLTLAACNTVIPIHMDDKSNYANGELHEDFETIDYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGENLRLDVLGLHEFDSVRKRMSVVIRFPDNTIKVLVKGADTSMLSILGIDYDREEFIKHTTQSHLGEYSMEGLRTLVVAARDLKDSEFELWQTRYEDASTSLTERAVKLRQTAALIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISIGLSCKLLTSDMQSIIINGNSENDCRQLLADAMEKYSIKSTQCGSQRPNHKNCENECHDLPKTSSMSDFNEGKEDLTDKPLALIIDGNSLLFDLATSCDVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIFVDLSDKTLLQYPKLYGAGHRQEAYNLRLFWFTMIDTLWQSLVLFYVPLYIYKESTIDIWSLGSLWTIAVVILVNVHLAMDVQRWVYITHAAVWGSIVITYACMVVLDSIPDDLSSCQVPNLLANYIAHNSCSIASTFWPSDIQIAREAEVLRKRKGREQMGSKRDRDSN | 1404 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 20843465 | 20850492 | + | ClCG04G006340.2 | Cla04g00644 | 270872 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla04g00644 | 1404 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 1155 | 1347 | IPR032630 | - | |
Cla04g00644 | 1404 | Gene3D | - | 955 | 1167 | IPR023214 | - | |
Cla04g00644 | 1404 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 1098 | 1213 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla04g00644 | 1404 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 620 | 711 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla04g00644 | 1404 | SFLD | C1.7: P-type atpase like | 671 | 1178 | - | - | |
Cla04g00644 | 1404 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 296 | 1402 | - | - | |
Cla04g00644 | 1404 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 693 | 971 | IPR023299 | GO:0000166 | |
Cla04g00644 | 1404 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 315 | 1342 | IPR023298 | - | |
Cla04g00644 | 1404 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 689 | 695 | IPR018303 | - | |
Cla04g00644 | 1404 | CDD | P-type_ATPase_APLT_Dnf-like | 317 | 1282 | - | - | |
Cla04g00644 | 1404 | Gene3D | - | 663 | 683 | - | - | |
Cla04g00644 | 1404 | Pfam | Phospholipid-translocating ATPase N-terminal | 301 | 366 | IPR032631 | - | |
Cla04g00644 | 1404 | SUPERFAMILY | HAD-like | 682 | 1173 | IPR036412 | - | |
Cla04g00644 | 1404 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 315 | 1346 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Cla04g00644 | 1404 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 296 | 1402 | - | - | |
Cla04g00644 | 1404 | SUPERFAMILY | Calcium ATPase, transduction domain A | 398 | 540 | IPR008250 | - | |
Cla04g00644 | 1404 | Pfam | E1-E2 ATPase | 399 | 645 | - | - | |
Cla04g00644 | 1404 | Gene3D | - | 377 | 544 | - | - | |
Cla04g00644 | 1404 | Gene3D | - | 801 | 938 | IPR023299 | GO:0000166 | |
Cla04g00644 | 1404 | SFLD | p-type atpase | 671 | 1178 | IPR044492 | - | |
Cla04g00644 | 1404 | Pfam | haloacid dehalogenase-like hydrolase | 684 | 999 | - | - | |
Cla04g00644 | 1404 | Gene3D | - | 697 | 719 | IPR023299 | GO:0000166 | |
Cla04g00644 | 1404 | Gene3D | - | 684 | 696 | IPR023214 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g00644 | Cla-Chr4:20843465 | Cla04g01120 | Cla-Chr4:26405711 | 0 | dispersed | |
Cla08g00858 | Cla-Chr8:20979650 | Cla04g00644 | Cla-Chr4:20843465 | 0 | transposed | |
Cla10g01496 | Cla-Chr10:30188099 | Cla04g00644 | Cla-Chr4:20843465 | 3.61E-16 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla04g00644 | K14802 | - | csv:101206692 | 2316.96 |