Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00726 ATGATTGTTTCCATGGACTTAAATGCCTCGCCGGTGCCTGAAGAGGATGAAGAGACGTTTGAGAGGCATGAAGAGGTGTATAGTGCTCCAGAGGAACATATAGAGACTGCTGTAAGCATAGCACGGCGGGAGCGAGAAGAAAGAAAAAGGCGGTTGAAAAGAGATCGCTCTCTCGAGAGACCGGTGCATGAATACCAGCAACCTGCACGGGATCAGTTTTACCCTTCTAAAAACCAAAAATCTGATAGAAACAGGCTTCCTCCAGGTTGGTTGGATTGCCCTGCATTTGGTCAAGAAATATGTTGCATGATTCCGTCCAAGGTTCCTCTGGGCGAATCCTTCAATGATTGTATAACACCTGGTAAAAGATACTCATTTAAGCAAGTGATCCATCAGCAGAGAGTTTGGGGAAGAAAACTCGGTTTGGTGATCGATTTGACAAATTCTTATCGTTATTATACAACAGCAGATTTGAATAAGGAGGGTATCAAGTATGTTAAGATTCCTTGCAAGGGGAGGGATTCCGTACCTGACAACAAGTCAGTCAATATGTTTGTTTACGAGGTCATGCAGTTCCTATCTCGTCAGAAACACTCGAAGAAGTATATTCTTGTCCACTGTACGCATGGCCATAATCGCACTGGATATATGATCATAAATTATCTCGTGCGTGCACTGTCCATTTCTGTTACCCAGGCTCTTAAAATGTTTGCTGATGCACGCCCTCCTGGAATTTACAAGCCTGACTACGTTGATGCATTATATACCTTTTACCATGAAAGAAAACCTGAAGCAGTTGTTTGTCCATCCACGCCTGAGTGGAAGAGATCTTCAGATCTTGATCTTAATGGCGAAGCAGTTCCAGATGATGATGATGATGGAGGTCCTGCTGCTCCTTTGAATGAAAATCATGATGATGGTGCTCAAGTGATGACAAATGATGATATTTTGGGTGATGAGATACCTGAGGACCAAGAACGTGCTTTGAAACAATTTTGCTATCAAATGCTTAAATTGAATGCTGGAGCAAGAGCAAATTTGCAATTTCCTGGGTCGCATCCAGTGTCTCTTAACAGAGACAATCTTCAACTGCTAAGGCAACGCTATTATTATGCCACATGGAAAGCTGATGGAACAAGATATATGATGCTCATTACCATGGATGGATGCTACTTGATTGACAGAGGTTTTAAATTTCGAAGAGTCCAAATGAGATTCCCATACAGAAATGCAAATGATGGCCAAGGTGAGAAGATTCACCACTATACACTACTTGATGGAGAAATGATTATTGATACTATGCCAGACTCGCAGAAGCAAGAGAGAAGATATCTTATATATGATATGATGACAATTAATCATGTTCCGGTCATTGAGCGTCCTTTCTACGAACGGTGGAAGATGCTTGAAAAAGAAGTGATCGAACCTCGCAATTCTGAGCGCCAGAGTATTTACCAAAGCAGGAACCCTCATTATAGATATGACCTAGAGCCATTCAGGGTGAGGAGAAAAGATTTTTGGTTGCTCTCCACGGTTACCAAACTTTTGAAGGAGTTCATACCTAGGCTTTCACATGATGCTGATGGTCTGATATTTCAGGGGTGGGATGATGCTTATGTTCCTCGAACTCATGAGGGTCTTTTAAAGTGGAAATATCCAGAAATGAACTCAGTCGACTTCCTATTCGAGTTGGGTGAAGATGATTCTGAGGTTCTTATTTTGTTTGAACGAGGAAAGAGGAAGACCATGGAAGGAAATAGGGTTAAGTTCAAAGATGGGGATCCCTCCTTTTATTCAGGAAAGATTGTCGAGTGCTCTTGGGATTCTGATGAGCAAGTATGGGTCTGCATGCGTATCAGGACGGACAAAACAACTCCTAATGATTTCAATACTTATAAAAAGGTCATGCGGAGCATTAGAGACAATATCACGGAGGAGGATTTGTTGAAAGAGATTCATGAGATCATACGCTTGCCCATGTATGCAGATAGGATAAGGATTGATAGTAAAGCAGCTCAACATACGAATTCAACACGACGGAGCGGAAAGACGCCACTGCAGTTGGATTGCACGGATCCTTTCTGGGGGTTTTGGCAATTTGATGTTGTTGGCTTTGCGTTTCATCTTGCGGAGCTACGGTGTGGCGGATTCATGAAATTCTCGGTGATTTTAGCTCTTCTGATTTGTCTAATTCTCTTCGTTCCGTTGAAATGCATTCACGGCGAGGAGCCCAAGAAAAACAAATTTCGGGAACGAGAAGCCACGGATGATGCCCTTGGATACCCTGAGATAGACGAGGATGCTTTGTTGAATACACAATGTCCAAAGAATTTGGAGCTAAGATGGCAAACAGAAGTGAGTTCTAGCATATATGCTACACCCTTGATCGCTGATATTAACAGTGATGGGAAACTTGAGATAGTGGTTCCATCTTTTGTTCACTACCTTGAGGTTCTAGAAGGTTCTGATGGAGACAAAATGCCAGGGTGGCCTGCTTTCCATCAGTCGACTGTGCATGCTAGTCCTCTTCTATATGATATAGACAAAGATGGTGTGAGGGAAATAGCTTTGGCCACATACAATGGAGAAGTGCTCTTTTTCAGGGTGTCAGGATATATGATGACAGACAAGTTAGAGATACCACGTCGCCGTGTGCGCAAGAATTGGTATGTGAGTTTAAATCCAGATCCAGTGGACCGGTCTTATCCAGATGTTCAAGATGAACAACTTGTCAGAGAAGCAACTAAGACAAAATCAATCTCTCAAACAAATGGAAGCGTTCCAGAGTTAAACCAGACAACAGAGACTACGATAAATGGAAGTGTGACCGAACTAAATACTTCGGCTGCCATACCAACTCAAATGTTGAATATTTCAGATACAGTGAATAATAGTATGGTGAATGACAGCAAAGTTGAACCGGATATTGTCCTGCCTACAAGCATGGCCAACAATGCTTCTATCAATGCTACAACTGGAATACTCGATAATAAGAATGGAACTGGGACGAGTAGACGAATTTTGGAAGTTAGTGACTCCAAACAATCTCAAGAAGATGGTTCTGGGTCCAAGGCAGATGGTAGTGGAGATGAGCATGTTGCCACAGTTGAAAATGATGAAGCTTTGGAAGCAGAAGCTGATTCATCATTTGATATATTCCGTGAAAATGATGAGCTGGCTGATGAGTATAATTATGACTATGATGATTATGTTGATGAATCCATGTGGGGAGATGAGGAGTGGACTGAAGTTAAGCATGAAAAAGTGGAGGAATATGTGGATATTGATGCACATTTATTGTGCACTCCTGTGATAGCTGACATTGACAACGATGGGATATCTGAAATGATTGTAGCTGTTTCATACTTTTTTGATCATGAGTACTATGATAACCCAGAGCACAAGAAAGAATTGGGTGATCTTGACATTGGGAAATATGTAGCTGGGGCCATTGTTGTTTTCAATCTGGATACAAAGCAAGTGAAGTGGACGACTGAACTAGACTTGAGCACAGATTCTGCAAACTTTCGTGCTTATATATATTCCTCCCCTACTGTCATCGATTTGGATGGTGATGGGAATCTGGATATTCTTGTTGGCACATCCTTTGGCTTGTTCTATGTCTTGGACCATCATGGCAAGGTGAGAGAAAAGTTTCCTCTTGAAATGGCTGATATTCAGGGAGCTGTTGTTGCAGCTGATATCAATGATGATGGGAAAATTGAACTTGTGACTGCTGATACACACGGAAATGTTGCTGCCTGGACTGCTCAAGGTCAAGAAATTTGGGAAAAGAATCTAAAGAGCCTTATACCGCAGGGTCCATCCATTGGTGATGTTGATGGGGACGGTCGTACTGATGTGGTGGTGCCGACGGTATCAGGAAATATATATGTTCTCAGTGGCAAGGATGGGTCATTTGTTCGTCCTTACCCCTATAGAACCCATGGAAGAGTGATGAATCAAGTTCTTCTTGTTGATTTGAACAAACGCGATGACAAAAAGAAGGGGCTTACTCTGGTCACATCATCGTTTGATGGGTATTTGTATCTCATTGATGGACCGACATCATGTGCTGATGTTATTGACATTGGCGAGACTTCATATAGCATGGTTCTGGCTGACAATGTTGATGGTGGAGATGATCTTGATCTTATTGTCTCAACCATGAATGGAAATGTTTTCTGCTTTTCAACTCCTGCTCCACATCATCCTCTCAAGGCATGGAGATCAACTAATCAAGGAAGAAACAACAATGCAGTCCGGCACAACCGTGAAGGTGTTTTTGTTTCACATTCATCTAGAACTTTCCGTGACGAGGAAGGCAAGAACTTCTGGGTTGAGATTGAGATTGTAGACCGTTACAGAAATCCTTCAGGGACTCAAGCACCATATAACGTCACTACAACCTTGATGGTTCCTGGCAATTACCAGGGAGAGAGGAAAATAAAACAAAACCAAATCTTCAAAGAACCAGGCAAACATCGGATAAAACTTCCAACCGTCAGTGTTAGAACAACAGGCACTGTTTTGGTGGAGATGGTTGACAAGAATGGACTCTATTTTTCGGATGAGTTCTCCCTCACATTCCACATGTATTACTATAAGCTCCTGAAGTGGCTTCTCGTCCTCCCGATGCTTGGAATGTTTGGTGTGCTCATGATCCTTCGCCCACAAGAGCCTGTGCCATTGCCATCATTTTCCCGGAACACTAACCTATGA 4722 42.4 MIVSMDLNASPVPEEDEETFERHEEVYSAPEEHIETAVSIARREREERKRRLKRDRSLERPVHEYQQPARDQFYPSKNQKSDRNRLPPGWLDCPAFGQEICCMIPSKVPLGESFNDCITPGKRYSFKQVIHQQRVWGRKLGLVIDLTNSYRYYTTADLNKEGIKYVKIPCKGRDSVPDNKSVNMFVYEVMQFLSRQKHSKKYILVHCTHGHNRTGYMIINYLVRALSISVTQALKMFADARPPGIYKPDYVDALYTFYHERKPEAVVCPSTPEWKRSSDLDLNGEAVPDDDDDGGPAAPLNENHDDGAQVMTNDDILGDEIPEDQERALKQFCYQMLKLNAGARANLQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRGFKFRRVQMRFPYRNANDGQGEKIHHYTLLDGEMIIDTMPDSQKQERRYLIYDMMTINHVPVIERPFYERWKMLEKEVIEPRNSERQSIYQSRNPHYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFELGEDDSEVLILFERGKRKTMEGNRVKFKDGDPSFYSGKIVECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDNITEEDLLKEIHEIIRLPMYADRIRIDSKAAQHTNSTRRSGKTPLQLDCTDPFWGFWQFDVVGFAFHLAELRCGGFMKFSVILALLICLILFVPLKCIHGEEPKKNKFREREATDDALGYPEIDEDALLNTQCPKNLELRWQTEVSSSIYATPLIADINSDGKLEIVVPSFVHYLEVLEGSDGDKMPGWPAFHQSTVHASPLLYDIDKDGVREIALATYNGEVLFFRVSGYMMTDKLEIPRRRVRKNWYVSLNPDPVDRSYPDVQDEQLVREATKTKSISQTNGSVPELNQTTETTINGSVTELNTSAAIPTQMLNISDTVNNSMVNDSKVEPDIVLPTSMANNASINATTGILDNKNGTGTSRRILEVSDSKQSQEDGSGSKADGSGDEHVATVENDEALEAEADSSFDIFRENDELADEYNYDYDDYVDESMWGDEEWTEVKHEKVEEYVDIDAHLLCTPVIADIDNDGISEMIVAVSYFFDHEYYDNPEHKKELGDLDIGKYVAGAIVVFNLDTKQVKWTTELDLSTDSANFRAYIYSSPTVIDLDGDGNLDILVGTSFGLFYVLDHHGKVREKFPLEMADIQGAVVAADINDDGKIELVTADTHGNVAAWTAQGQEIWEKNLKSLIPQGPSIGDVDGDGRTDVVVPTVSGNIYVLSGKDGSFVRPYPYRTHGRVMNQVLLVDLNKRDDKKKGLTLVTSSFDGYLYLIDGPTSCADVIDIGETSYSMVLADNVDGGDDLDLIVSTMNGNVFCFSTPAPHHPLKAWRSTNQGRNNNAVRHNREGVFVSHSSRTFRDEEGKNFWVEIEIVDRYRNPSGTQAPYNVTTTLMVPGNYQGERKIKQNQIFKEPGKHRIKLPTVSVRTTGTVLVEMVDKNGLYFSDEFSLTFHMYYYKLLKWLLVLPMLGMFGVLMILRPQEPVPLPSFSRNTNL 1573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22240261 22267593 - ClCG04G007260.2 Cla04g00726 270954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00726 1573 CDD RNA_5'-triphosphatase 89 255 - -
Cla04g00726 1573 PANTHER - 725 1573 IPR045232 -
Cla04g00726 1573 MobiDBLite consensus disorder prediction 1010 1031 - -
Cla04g00726 1573 SUPERFAMILY Nucleic acid-binding proteins 554 665 IPR012340 -
Cla04g00726 1573 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 86 275 IPR029021 -
Cla04g00726 1573 MobiDBLite consensus disorder prediction 1 85 - -
Cla04g00726 1573 Gene3D Protein tyrosine phosphatase superfamily 82 294 IPR029021 -
Cla04g00726 1573 Gene3D - 1076 1404 IPR015943 GO:0005515
Cla04g00726 1573 PANTHER PROTEIN DEFECTIVE IN EXINE FORMATION 1 725 1573 - -
Cla04g00726 1573 Pfam mRNA capping enzyme, catalytic domain 353 551 IPR001339 GO:0004484|GO:0005524|GO:0006370
Cla04g00726 1573 CDD Adenylation_mRNA_capping 324 552 IPR001339 GO:0004484|GO:0005524|GO:0006370
Cla04g00726 1573 MobiDBLite consensus disorder prediction 22 66 - -
Cla04g00726 1573 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 183 252 IPR000387 GO:0016311|GO:0016791
Cla04g00726 1573 MobiDBLite consensus disorder prediction 275 309 - -
Cla04g00726 1573 SUPERFAMILY Integrin alpha N-terminal domain 771 1329 IPR028994 -
Cla04g00726 1573 Pfam Dual specificity phosphatase, catalytic domain 138 258 IPR000340 GO:0008138|GO:0016311
Cla04g00726 1573 Gene3D - 550 658 IPR012340 -
Cla04g00726 1573 Gene3D DNA ligase/mRNA capping enzyme 312 549 - -
Cla04g00726 1573 ProSiteProfiles ATP-dependent DNA ligase family profile. 435 580 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Cla04g00726 1573 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 313 552 - -
Cla04g00726 1573 ProSitePatterns Tyrosine specific protein phosphatases active site. 205 215 IPR016130 GO:0016311|GO:0016791
Cla04g00726 1573 Pfam mRNA capping enzyme, C-terminal domain 555 649 IPR013846 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00726 - - csv:101209717 1596.25