Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla04g00762 | ATGGCGGAGGGTTTTGAAGTTTACCATGTCCCACAACAAAGCAGGAGAGACAAGCTTAGAGTTGGAATTGGAATTGGTACTACTAATTCTACTAATTCTATTAATCATCATAATAATTTCTTCCCTTTATATGATGATCCTTCTTCTTTTATTTCTTCCGATTTTGATTTTCATCAAAATCCCTCTTTTCAACTTTATCATCATCATAATTACCCTCCTACCTCTGCCGTCACCGCCGCCGCCCTCCACCACCACCTCCCTCCGCTCCTCTCCGAACAACAACCACCCTTGTCCCTTGACCTCAACCTCCAACACCGCTACGCCTATCATTCTACTTTACCACTTCAAGCCTCAAAATTCTTCAAGCCAGCTCAGCAGCTCCTCCATGACCTATTTGATTACGCCCCCCATAACTCCTCCGACAAGTTGCTGCCGGATTCCGCCCTTCTTGACACCTTGGAAGGTGATATTCCCCCCGCCGCCGATGATGGATTTGAAACCCACACGACAAAATCTAGGCTTATTACCATGCTCCACGAGGTTTATAGAAGATATAAACTATACTATCAGCAAATGCAAGCAGTGGTCACAACATTTGAGTACGCTGCAGGGCTTGGCAATGCAGCTCCCTATGCAAACTTAGCCGTAAAAGCCATGTTTAAGCACTTCAAATTCTTAAAGAACGCCATAGCCGACCAGCTCCAATTCAACAAGCAGCACCAACCGCCGTCTTACAATCCATATTTTCAAAGATCCATTAACAACCACGGTGCTGGATTCGTCGACCACCAACCCGTTTGGCGCCCGCAGCGAGGCCTCCCTGAGAGTGCTGTCACCGTCCTCCGAGCTTGGCTCTTTGAGCACTTCCTCCATCCTTATCCTACGGATACAGATAAGCTCATGTTGGCCAACCAGACGGGACTCTCGAGAAGTCAGGTATCCAACTGGTTCATCAATGCAAGAGTGAGACTGTGGAAACCGATGGTTGAAGAAATCCACATGTTAGAAACAAGGCAAGCTCAAAAATCTCAGCAAAAGGAAGCCAACGATAATAACGCCTCAAACAACAACAACGACCATCTTTCATCCACAAACGAATCCTTATTGAAACCCGACGGCCACAACAACAACAATGCATCTTCTTCAAACCACGACCACCACCCTCTAGATTTGTCCAACACCCATTTCTTTCCAACCCACCACCCTCACGCCGCTGCCGGAGCCACCGCTATTGGCGGCAGTGGCAACGTTTCCTTGACACTCGGCCTCCACCAAAACCATGGTGGGATCACTCTCACGGAGCCATTTCCCATCAATGCTGCTCAGCATTTTAACCTAGGGTTAGAAGCCAACGGTGAAGGATTTGTAAATGAGTGGTTTTGA | 1383 | 47.43 | MAEGFEVYHVPQQSRRDKLRVGIGIGTTNSTNSINHHNNFFPLYDDPSSFISSDFDFHQNPSFQLYHHHNYPPTSAVTAAALHHHLPPLLSEQQPPLSLDLNLQHRYAYHSTLPLQASKFFKPAQQLLHDLFDYAPHNSSDKLLPDSALLDTLEGDIPPAADDGFETHTTKSRLITMLHEVYRRYKLYYQQMQAVVTTFEYAAGLGNAAPYANLAVKAMFKHFKFLKNAIADQLQFNKQHQPPSYNPYFQRSINNHGAGFVDHQPVWRPQRGLPESAVTVLRAWLFEHFLHPYPTDTDKLMLANQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQAQKSQQKEANDNNASNNNNDHLSSTNESLLKPDGHNNNNASSSNHDHHPLDLSNTHFFPTHHPHAAAGATAIGGSGNVSLTLGLHQNHGGITLTEPFPINAAQHFNLGLEANGEGFVNEWF | 460 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 22705788 | 22710147 | + | ClCG04G007700.1 | Cla04g00762 | 270990 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla04g00762 | 460 | CDD | homeodomain | 267 | 328 | IPR001356 | GO:0003677 | |
Cla04g00762 | 460 | SMART | prehox3 | 107 | 232 | IPR006563 | - | |
Cla04g00762 | 460 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 54 | 437 | - | - | |
Cla04g00762 | 460 | SUPERFAMILY | Homeodomain-like | 269 | 334 | IPR009057 | - | |
Cla04g00762 | 460 | ProSiteProfiles | 'Homeobox' domain profile. | 264 | 327 | IPR001356 | GO:0003677 | |
Cla04g00762 | 460 | Pfam | Homeobox KN domain | 284 | 323 | IPR008422 | GO:0003677|GO:0006355 | |
Cla04g00762 | 460 | Gene3D | - | 270 | 332 | - | - | |
Cla04g00762 | 460 | MobiDBLite | consensus disorder prediction | 338 | 409 | - | - | |
Cla04g00762 | 460 | MobiDBLite | consensus disorder prediction | 338 | 387 | - | - | |
Cla04g00762 | 460 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 9 | 54 | 437 | - | - | |
Cla04g00762 | 460 | Pfam | Associated with HOX | 115 | 231 | IPR006563 | - | |
Cla04g00762 | 460 | SMART | HOX_1 | 267 | 331 | IPR001356 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla04g00762 | Cla10g02042 | CCT | |
Cla04g00762 | Cla10g02042 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g00762 | Cla-Chr4:22705788 | Cla10g01741 | Cla-Chr10:33296516 | 1.57E-58 | dispersed | |
Cla10g02042 | Cla-Chr10:36169958 | Cla04g00762 | Cla-Chr4:22705788 | 4.81E-110 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60909 | PF07526 | POX | 1.70E-28 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla04g00762 | - | - | csv:101221147 | 643.654 |