Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla04g00807 | ATGGATGAACTCTTATCTGTTGGCTTGTCAAAGGCTAGGCAGGCTCTTCTTTCAGGGTGCTCTGCTGGGGGCTTGGCTACCCTTATACATTGTGATGACTTCAGAGAGCTTTTACCGAAGGATGCAACTGTCAAGTGTCTGGCTGATGGTGGATTTTTCCTTGACGAGGAAGATGTTTGGGGAAATCGTACAATGAGATCTTTCTATCGTGATGTTTTCAACCTTCAGGTTGTACTCTGCTCCTCGTTTGTTTTGATTTATACATTTGTAGACAATGGCTTTATTAGGATAACCTCTGTTAGCGTTAGGTACAAGCCTACAACCTCCAATATAAGGTTCATTAAGAGAACTGGTAAAAGCTTACCCAAGGATTGTACAGCTACAGACGAGCCATCTAAGATACAACATGTCTTGGTGCCAAACACATTAGATCCTGCTGGCTCTTGGCAAAAATGTAGGCTTAATATTCATAAATGTGACCATGCTCAGCTTGAAATTCTTCAAGGGTTCCGGGACTCTTTGCTGAAGGCGCTGAGTGACTTCAAGCAAAACAAGGAAGGAGGACTTTTTGTAAATTCTTGCTTCATCCATTGCCAAACATGGATGTCTGAGACATGGCATTCCCCCAATTCTCCAAGGATAAATAAGAGGACTATAGCAGAGGCCGTGGGTGATTGGTACTTCAAACGAAATTCAGTGAAGCTAATTGACTGCCCTTTTCCATGCAATCCTACCTGCATTCATATGGATTTTATCCAAGGTTAG | 765 | 42.61 | MDELLSVGLSKARQALLSGCSAGGLATLIHCDDFRELLPKDATVKCLADGGFFLDEEDVWGNRTMRSFYRDVFNLQVVLCSSFVLIYTFVDNGFIRITSVSVRYKPTTSNIRFIKRTGKSLPKDCTATDEPSKIQHVLVPNTLDPAGSWQKCRLNIHKCDHAQLEILQGFRDSLLKALSDFKQNKEGGLFVNSCFIHCQTWMSETWHSPNSPRINKRTIAEAVGDWYFKRNSVKLIDCPFPCNPTCIHMDFIQG | 254 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 23123349 | 23129800 | - | ClCG04G008180.2 | Cla04g00807 | 271035 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla04g00807 | 254 | PANTHER | NOTUM-RELATED | 132 | 247 | IPR004963 | GO:0016787 | |
| Cla04g00807 | 254 | PANTHER | NOTUM-RELATED | 1 | 78 | IPR004963 | GO:0016787 | |
| Cla04g00807 | 254 | Pfam | Pectinacetylesterase | 132 | 232 | IPR004963 | GO:0016787 | |
| Cla04g00807 | 254 | Pfam | Pectinacetylesterase | 1 | 76 | IPR004963 | GO:0016787 | |
| Cla04g00807 | 254 | PANTHER | PECTIN ACETYLESTERASE 4 | 132 | 247 | - | - | |
| Cla04g00807 | 254 | PANTHER | PECTIN ACETYLESTERASE 4 | 1 | 78 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla04g00807 | Cla-Chr4:23123349 | Cla05g00888 | Cla-Chr5:8744604 | 8.55E-61 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla04g00807 | K19882 | - | csv:101206380 | 383.259 |