Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00808 ATGGGTAGACTAGCTGTAGCCGCTATCGTGAGTTTATGGGTGGTTCCGATCTCCATCCTCGTCAACCGCATTCTTCCTGATCCTTATATGGACGAGATATTTCATGTGCCTCAAGCTCAGAAGTACTGCAGTGGGAACTTCAGAAGTTGGGACCCCATGATTACAACTCCTCCTGGACTGTACTATCTTTCACTTGTCCATGTTGCTTCTTTGTTTCCAGCCATTGTCTTTACTCGAGCAGCACAATCATTTTCTGTAGCCTGTTCCATTCAGGTTCTTCGTTCTATCAATGGGATTTTGGCAGTTTTGTGCAGTGTACTTGTATATGAGATAATCTCCCATTTAAGGCCAAATCTTGATGATAAAAAGGCAACGATTTATGCTGTGATTTTAGCACTTTATCCACTCCATTGGTTCTTCACTTTTCTGTATTACACTGATGTTGCATCGCTTACAGCCGTCCTTGCTATGTACCTAGCATGCTTGAAGAAGAATTACTGGTTGAGTGCATTGTTTGGTATCTTTGCAGTTGTCATTCGACAAACAAATGTTATATGGATGCTATTTGTAGCATGCTCTGGGATTATTGATACTACTCTGACTTGCCACGTTGATAATATACAAATGCATGAGAATGATGTAATGGAGGAAAGTAATCCATTGAATGCTAAAGGCAATTTCGCTTCTAGAGCAAACTTGCGAAAGAGAAAGTTGAATCGTACAAAGGATATGGTTAAACAATTTCCACAGAGCACAAGATTCTCATCAATAAACCAGAAACTAGCTGAAGTTTTGTTGCCACAGATATATATTTTAAGCACTTTAATGGACGAGATTAGGACCATGACATTGACCATGTGGCATATGAAATTTAAGCTCTTGGTTTCATTTTGCCCCTTTGCGATTGTGCTTATGGCATTTGTTGCTTTTGTTCGTTGGAATGGAAGTATAGTTCTTGGTGCAAAGGAAGCACATGCAGTCTCTCTGCATTTTGCCCAGATTATGTATTTTGGTCTTTTCTCTGGTTTTATTATGGCTCCAGTGCACTGTAATCTAAGTCAAGTCATAGATTTGTTTCACTCATTCTGGAAAGGCAGGCCTCTTAGTTTTTTTCAAGTTTGCGTTGCTCTTCTTGCTGGCTTCATCTCTGTACACTATTTCAGGTCAGTTCAGGGATCGACCAATGATAAGTTATCACTTGTTAGACATTTGGTCTGTTGCAGCATAGCTCACCCCTATCTGCTAGCTGACAATCGGCATTACCCATTCTACCTCTGGCGTAAAGTTATCAACGCGCATTGGTCATCGAAGTACCTTCTCGTTCCAGCATATATTTGTTCATGGCTTTCCATCATCAACATATTAGGTGAGGTCTTACTCTTATCTACTACTTTCTTTTGGTGTAAAACTCAGCATCTTTTTATTCAACCCAACTTATTTAAATTTCCAATTGGAGAGCTCTTTTGGAAATCTCAGAGGAAAATCTGGGTACTTGCCTATTTCTTAGCCACTGCTGCGGTTCTTGTTCCTGCTCCTTTGATCGAGTTTAGATACTTCACAACTCCAATTTACTTCTTGATGCTTCATTCTCAGATGAATGGTAGACTAAGTAGGCTCTTGGTTGCACTTCTTTACATAGCTTTGAATGCCTTCACAATGTTCATGTTCTTGTTTCGTCCATTTTATTGGGAAAATGAAACTGGAAAGCAGAGGTTCTTTGTTAAGTTATCACTCCAATTATATCAAATTTCTCTGTCTTCGAGCTCAATTTGCTTCTCCGATTCTGAATTATCGACCCCTTTTGACCTTCAAATGGCGATCTCCGGCTTTCGAGCTCTTCTATGGTGGAGCAACAGATGGTCCAAGAAAGACTGGGCGATTGCAGCTATCTGTTTCGCTTTCATTGTTTTCGTTTTTTCCTTCCTCTCCGATTCTTGGCATGCTGAAGATAGTGGCATCAACCATAGTTTCGATCTCAATCCCGCCAATGACCCCGATTTGGTTGACCTATCTTTGCTTCAGAATGCCAAAGCAAAAGGCGCTCTATGTCTTGATGGGAGTCTGCCTGGATACCATTTTCAGAAAGGCTTTGGATCTGGTTCTACCAGCTGGGTTCTTCATATTGAGGGTGGAGGTTGGTGCGATACAGTCTCGTCTTGTTCTTCGCGGAAAATGACCCCGTTAGGTTCATCAGACTACATGGAGCGTCGTGTTCGTTTCTCTGGAATTTTAAGTAGTGATGCATCCAAAAATCCTGGTACATTTTGTGTATTACTGTTTCTGTTGGCTACAGTACTCTCCATTTATCACTTTATCTGGTCTTGTTTTGATTCCATTTACACTAATGTTGCTGAACTTGTTTCTGACAGTTCTTCGTGGAAATCCATTGATACAAAGGTTTCTTATATGTATATATTTCTTCTTTTGGAGATCAGTAGTAAGTCCTTAATTTCTGTCTCGACATCTGGTACAAGCATTCTTCAGATTTCTATAATTGGAACAAAATCAAGATACGTTACTGTGATGGAGCATCGTTTGCAAGCCATCCTGAAGGTGAAACAAAGGTACAACATTTTCAAGAACGGTACTTGGTCATTTCTTTTCATGGCATACAAAATTTGCAATGGAATAAAGTTGCCTTAG 2643 40.18 MGRLAVAAIVSLWVVPISILVNRILPDPYMDEIFHVPQAQKYCSGNFRSWDPMITTPPGLYYLSLVHVASLFPAIVFTRAAQSFSVACSIQVLRSINGILAVLCSVLVYEIISHLRPNLDDKKATIYAVILALYPLHWFFTFLYYTDVASLTAVLAMYLACLKKNYWLSALFGIFAVVIRQTNVIWMLFVACSGIIDTTLTCHVDNIQMHENDVMEESNPLNAKGNFASRANLRKRKLNRTKDMVKQFPQSTRFSSINQKLAEVLLPQIYILSTLMDEIRTMTLTMWHMKFKLLVSFCPFAIVLMAFVAFVRWNGSIVLGAKEAHAVSLHFAQIMYFGLFSGFIMAPVHCNLSQVIDLFHSFWKGRPLSFFQVCVALLAGFISVHYFRSVQGSTNDKLSLVRHLVCCSIAHPYLLADNRHYPFYLWRKVINAHWSSKYLLVPAYICSWLSIINILGEVLLLSTTFFWCKTQHLFIQPNLFKFPIGELFWKSQRKIWVLAYFLATAAVLVPAPLIEFRYFTTPIYFLMLHSQMNGRLSRLLVALLYIALNAFTMFMFLFRPFYWENETGKQRFFVKLSLQLYQISLSSSSICFSDSELSTPFDLQMAISGFRALLWWSNRWSKKDWAIAAICFAFIVFVFSFLSDSWHAEDSGINHSFDLNPANDPDLVDLSLLQNAKAKGALCLDGSLPGYHFQKGFGSGSTSWVLHIEGGGWCDTVSSCSSRKMTPLGSSDYMERRVRFSGILSSDASKNPGTFCVLLFLLATVLSIYHFIWSCFDSIYTNVAELVSDSSSWKSIDTKVSYMYIFLLLEISSKSLISVSTSGTSILQISIIGTKSRYVTVMEHRLQAILKVKQRYNIFKNGTWSFLFMAYKICNGIKLP 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23130044 23140581 - ClCG04G008185.1 Cla04g00808 271036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00808 880 PANTHER DOL-P-GLC:GLC(2)MAN(9)GLCNAC(2)-PP-DOL ALPHA-1,2-GLUCOSYLTRANSFERASE-RELATED 4 390 - -
Cla04g00808 880 Pfam Pectinacetylesterase 665 753 IPR004963 GO:0016787
Cla04g00808 880 PANTHER ALPHA-1,2-GLUCOSYLTRANSFERASE ALG10 406 573 IPR016900 GO:0006488|GO:0106073
Cla04g00808 880 Pfam DIE2/ALG10 family 26 527 IPR016900 GO:0006488|GO:0106073
Cla04g00808 880 PANTHER ALPHA-1,2-GLUCOSYLTRANSFERASE ALG10 4 390 IPR016900 GO:0006488|GO:0106073
Cla04g00808 880 PANTHER DOL-P-GLC:GLC(2)MAN(9)GLCNAC(2)-PP-DOL ALPHA-1,2-GLUCOSYLTRANSFERASE-RELATED 406 573 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00808 Cla-Chr4:23130044 Cla07g01062 Cla-Chr7:27204098 6.17E-22 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00808 K03850 - csv:101214003 879.011