Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla04g00820 | ATGGCCGGCAAGGGAGAAGGTCCGGCTATCGGAATCGATCTCGGAACTACCTACTCTTGCGTTGGTGTCTGGCAACACGATCGTGTTGAGATCATCGCCAATGACCAGGGTAACAGGACTACCCCTTCCTATGTTGCCTTCACCGACACTGAGCGTTTGATCGGTGACGCCGCTAAGAACCAGGTTGCCATGAACCCGATTAACACCGTCTTTGACGCAAAGAGGTTGATCGGTAGAAGATTCAGCGACTCTTCAGTCCAAAGTGACATCAAGTTGTGGCCATTCAAGGTGATCCCTGGGCCTGGTGACAAGCCCATGATTGTTGTCAGCTACAAGGGTGAAGAGAAGCAATTCGCTGCTGAAGAAATCTCTTCCATGGTTCTTATTAAGATGCGTGAAATTGCCGAAGCTTACCTCGGTTCCACAGTGAAGAATGCCGTCGTCACTGTTCCTGCTTACTTTAACGACTCTCAACGTCAAGCCACCAAGGATGCTGGTGTCATTGCTGGTCTCAACGTTATGAGAATTATCAACGAGCCCACCGCTGCTGCCATTGCCTATGGGCTTGACAAGAAAGCAACAAGTGTCGGTGAAAAGAATGTTCTGATTTTCGATCTTGGTGGTGGTACTTTTGACGTCTCTCTTCTCACCATTGAAGAGGGTATCTTCGAGGTGAAGGCCACTGCTGGAGACACTCACCTTGGTGGTGAAGATTTTGACAACAGATTAGTCAACCACTTTGTCCAGGAATTCAAGAGGAAGCACAAGAAGGACATCAGTGGCAACCCAAGAGCTCTTAGAAGGCTGAGAACTTCTTGTGAGAGAGCGAAGAGAACTCTCTCGTCCACTGCTCAAACCACCATTGAGATTGATTCTTTGTACGAAGGAATTGACTTCTACTCAACCATTACTCGTGCTAGATTCGAGGAATTGAACATGGATCTTTTCAGAAAGTGTATGGAACCCGTTGAGAAGTGTTTGAGAGATGCCAAGATGGACAAGAGCACCGTCCATGATGTTGTGCTTGTTGGTGGTTCTACTAGGATTCCCAAGGTCCAACAATTGTTGCAGGACTTCTTCAATGGCAAGGAGCTTTGCAAGAGCATCAACCCCGATGAAGCCGTTGCCTATGGTGCAGCAGTTCAAGCTGCCATCTTGAGCGGTGAGGGAAATGAGAAGGTGCAGGATCTTCTTCTATTGGATGTCACCCCACTTTCTCTTGGTTTGGAAACCGCGGGTGGAGTGATGACTGTTTTGATCCCAAGGAACACCACCATTCCCACAAAGAAGGAGCAAGTCTTCTCTACCTACTCCGACAACCAGCCCGGTGTGTTGATCCAAGTATACGAAGGTGAAAGAACAAGAACCCGCGACAACAACTTGCTTGGGAAATTCGAACTCTCCGGTATCCCTCCAGCTCCCAGGGGTGTTCCTCAAATCACAGTGTGCTTCGACATTGATGCCAACGGTATCTTGAACGTCTCTGCTGAAGACAAGACCACCGGACAAAAGAACAAAATCACCATTACTAATGACAAGGGTAGACTCTCCAAGGAGGAGATTGAGAAGATGGTACAAGAAGCAGAGAAGTACAAGTCTGAGGATGAGGAGCACAAGAAGAAGGTTGAAGCCAAGAATGCTTTGGAGAACTACGCTTACAACATGAGGAACACCGTGAACGACGAGAAGATTGGTGCTAAGCTTTCCCCGGCCGACAAGAAGAAGATTGATGATGCCATCGAACAGTCGATCCAATGGCTCGATGCCAACCAGCTTGCCGAGGCAGACGAGTTTGAGGACAAGATGAAGGAGTTGGAGAGCATCTGCAACCCAATCATCGCCAAGATGTACCAAGGTGCCGGAGCTGACATGGGCGGCGGTGCCGACGACAGTGCTCCTTCTGGCGGTAGCGGTGCTGGTCCCAAGATTGAGGAAGTGGACTAA | 1944 | 49.02 | MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIPGPGDKPMIVVSYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVNDEKIGAKLSPADKKKIDDAIEQSIQWLDANQLAEADEFEDKMKELESICNPIIAKMYQGAGADMGGGADDSAPSGGSGAGPKIEEVD | 647 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 23247541 | 23250196 | - | ClCG04G008300.2 | Cla04g00820 | 271048 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla04g00820 | 647 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Cla04g00820 | 647 | Pfam | Hsp70 protein | 9 | 618 | IPR013126 | GO:0005524|GO:0140662 | |
Cla04g00820 | 647 | MobiDBLite | consensus disorder prediction | 619 | 647 | - | - | |
Cla04g00820 | 647 | Gene3D | - | 10 | 384 | - | - | |
Cla04g00820 | 647 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 392 | 549 | IPR029047 | - | |
Cla04g00820 | 647 | Gene3D | - | 545 | 619 | IPR029048 | - | |
Cla04g00820 | 647 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 203 | 216 | IPR018181 | - | |
Cla04g00820 | 647 | Coils | Coil | 521 | 541 | - | - | |
Cla04g00820 | 647 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Cla04g00820 | 647 | PRINTS | 70kDa heat shock protein signature | 36 | 48 | - | - | |
Cla04g00820 | 647 | PRINTS | 70kDa heat shock protein signature | 58 | 66 | - | - | |
Cla04g00820 | 647 | PRINTS | 70kDa heat shock protein signature | 146 | 166 | - | - | |
Cla04g00820 | 647 | PRINTS | 70kDa heat shock protein signature | 209 | 219 | - | - | |
Cla04g00820 | 647 | PRINTS | 70kDa heat shock protein signature | 337 | 353 | - | - | |
Cla04g00820 | 647 | PRINTS | 70kDa heat shock protein signature | 369 | 389 | - | - | |
Cla04g00820 | 647 | PRINTS | 70kDa heat shock protein signature | 396 | 415 | - | - | |
Cla04g00820 | 647 | PRINTS | 70kDa heat shock protein signature | 477 | 493 | - | - | |
Cla04g00820 | 647 | SUPERFAMILY | Actin-like ATPase domain | 198 | 388 | IPR043129 | - | |
Cla04g00820 | 647 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 340 | 354 | IPR018181 | - | |
Cla04g00820 | 647 | Gene3D | - | 192 | 366 | - | - | |
Cla04g00820 | 647 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 1 | 628 | IPR013126 | GO:0005524|GO:0140662 | |
Cla04g00820 | 647 | PANTHER | HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE | 1 | 628 | - | - | |
Cla04g00820 | 647 | SUPERFAMILY | Actin-like ATPase domain | 8 | 191 | IPR043129 | - | |
Cla04g00820 | 647 | CDD | HSPA1-2_6-8-like_NBD | 9 | 387 | - | - | |
Cla04g00820 | 647 | Gene3D | Actin; Chain A, domain 4 | 235 | 318 | - | - | |
Cla04g00820 | 647 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 391 | 544 | IPR029047 | - | |
Cla04g00820 | 647 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 543 | 622 | IPR029048 | - | |
Cla04g00820 | 647 | Gene3D | - | 71 | 126 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g00820 | Cla-Chr4:23247541 | Cla09g01948 | Cla-Chr9:37053583 | 0 | dispersed | |
Cla01g00179 | Cla-Chr1:1799993 | Cla04g00820 | Cla-Chr4:23247541 | 0 | transposed | |
Cla05g00551 | Cla-Chr5:5024101 | Cla04g00820 | Cla-Chr4:23247541 | 1.62E-90 | transposed | |
Cla05g01487 | Cla-Chr5:23738030 | Cla04g00820 | Cla-Chr4:23247541 | 2.96E-79 | transposed | |
Cla06g00965 | Cla-Chr6:19168883 | Cla04g00820 | Cla-Chr4:23247541 | 2.80E-173 | transposed | |
Cla08g00201 | Cla-Chr8:4079068 | Cla04g00820 | Cla-Chr4:23247541 | 2.47E-17 | transposed | |
Cla09g00198 | Cla-Chr9:1967576 | Cla04g00820 | Cla-Chr4:23247541 | 9.26E-83 | transposed | |
Cla09g00943 | Cla-Chr9:9892526 | Cla04g00820 | Cla-Chr4:23247541 | 5.25E-164 | transposed | |
Cla10g00936 | Cla-Chr10:22132516 | Cla04g00820 | Cla-Chr4:23247541 | 0 | transposed | |
Cla11g01102 | Cla-Chr11:22417393 | Cla04g00820 | Cla-Chr4:23247541 | 0 | transposed | |
Cla11g01635 | Cla-Chr11:30031677 | Cla04g00820 | Cla-Chr4:23247541 | 3.53E-62 | transposed | |
Cla04g00820 | Cla-Chr4:23247541 | Cla09g01941 | Cla-Chr9:37014502 | 1.12E-39 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla04g00820 | K03283 | - | csv:101215599 | 1224.54 |