Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00820 ATGGCCGGCAAGGGAGAAGGTCCGGCTATCGGAATCGATCTCGGAACTACCTACTCTTGCGTTGGTGTCTGGCAACACGATCGTGTTGAGATCATCGCCAATGACCAGGGTAACAGGACTACCCCTTCCTATGTTGCCTTCACCGACACTGAGCGTTTGATCGGTGACGCCGCTAAGAACCAGGTTGCCATGAACCCGATTAACACCGTCTTTGACGCAAAGAGGTTGATCGGTAGAAGATTCAGCGACTCTTCAGTCCAAAGTGACATCAAGTTGTGGCCATTCAAGGTGATCCCTGGGCCTGGTGACAAGCCCATGATTGTTGTCAGCTACAAGGGTGAAGAGAAGCAATTCGCTGCTGAAGAAATCTCTTCCATGGTTCTTATTAAGATGCGTGAAATTGCCGAAGCTTACCTCGGTTCCACAGTGAAGAATGCCGTCGTCACTGTTCCTGCTTACTTTAACGACTCTCAACGTCAAGCCACCAAGGATGCTGGTGTCATTGCTGGTCTCAACGTTATGAGAATTATCAACGAGCCCACCGCTGCTGCCATTGCCTATGGGCTTGACAAGAAAGCAACAAGTGTCGGTGAAAAGAATGTTCTGATTTTCGATCTTGGTGGTGGTACTTTTGACGTCTCTCTTCTCACCATTGAAGAGGGTATCTTCGAGGTGAAGGCCACTGCTGGAGACACTCACCTTGGTGGTGAAGATTTTGACAACAGATTAGTCAACCACTTTGTCCAGGAATTCAAGAGGAAGCACAAGAAGGACATCAGTGGCAACCCAAGAGCTCTTAGAAGGCTGAGAACTTCTTGTGAGAGAGCGAAGAGAACTCTCTCGTCCACTGCTCAAACCACCATTGAGATTGATTCTTTGTACGAAGGAATTGACTTCTACTCAACCATTACTCGTGCTAGATTCGAGGAATTGAACATGGATCTTTTCAGAAAGTGTATGGAACCCGTTGAGAAGTGTTTGAGAGATGCCAAGATGGACAAGAGCACCGTCCATGATGTTGTGCTTGTTGGTGGTTCTACTAGGATTCCCAAGGTCCAACAATTGTTGCAGGACTTCTTCAATGGCAAGGAGCTTTGCAAGAGCATCAACCCCGATGAAGCCGTTGCCTATGGTGCAGCAGTTCAAGCTGCCATCTTGAGCGGTGAGGGAAATGAGAAGGTGCAGGATCTTCTTCTATTGGATGTCACCCCACTTTCTCTTGGTTTGGAAACCGCGGGTGGAGTGATGACTGTTTTGATCCCAAGGAACACCACCATTCCCACAAAGAAGGAGCAAGTCTTCTCTACCTACTCCGACAACCAGCCCGGTGTGTTGATCCAAGTATACGAAGGTGAAAGAACAAGAACCCGCGACAACAACTTGCTTGGGAAATTCGAACTCTCCGGTATCCCTCCAGCTCCCAGGGGTGTTCCTCAAATCACAGTGTGCTTCGACATTGATGCCAACGGTATCTTGAACGTCTCTGCTGAAGACAAGACCACCGGACAAAAGAACAAAATCACCATTACTAATGACAAGGGTAGACTCTCCAAGGAGGAGATTGAGAAGATGGTACAAGAAGCAGAGAAGTACAAGTCTGAGGATGAGGAGCACAAGAAGAAGGTTGAAGCCAAGAATGCTTTGGAGAACTACGCTTACAACATGAGGAACACCGTGAACGACGAGAAGATTGGTGCTAAGCTTTCCCCGGCCGACAAGAAGAAGATTGATGATGCCATCGAACAGTCGATCCAATGGCTCGATGCCAACCAGCTTGCCGAGGCAGACGAGTTTGAGGACAAGATGAAGGAGTTGGAGAGCATCTGCAACCCAATCATCGCCAAGATGTACCAAGGTGCCGGAGCTGACATGGGCGGCGGTGCCGACGACAGTGCTCCTTCTGGCGGTAGCGGTGCTGGTCCCAAGATTGAGGAAGTGGACTAA 1944 49.02 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIPGPGDKPMIVVSYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVNDEKIGAKLSPADKKKIDDAIEQSIQWLDANQLAEADEFEDKMKELESICNPIIAKMYQGAGADMGGGADDSAPSGGSGAGPKIEEVD 647
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 23247541 23250196 - ClCG04G008300.2 Cla04g00820 271048
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00820 647 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Cla04g00820 647 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Cla04g00820 647 MobiDBLite consensus disorder prediction 619 647 - -
Cla04g00820 647 Gene3D - 10 384 - -
Cla04g00820 647 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Cla04g00820 647 Gene3D - 545 619 IPR029048 -
Cla04g00820 647 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Cla04g00820 647 Coils Coil 521 541 - -
Cla04g00820 647 PRINTS 70kDa heat shock protein signature 8 21 - -
Cla04g00820 647 PRINTS 70kDa heat shock protein signature 36 48 - -
Cla04g00820 647 PRINTS 70kDa heat shock protein signature 58 66 - -
Cla04g00820 647 PRINTS 70kDa heat shock protein signature 146 166 - -
Cla04g00820 647 PRINTS 70kDa heat shock protein signature 209 219 - -
Cla04g00820 647 PRINTS 70kDa heat shock protein signature 337 353 - -
Cla04g00820 647 PRINTS 70kDa heat shock protein signature 369 389 - -
Cla04g00820 647 PRINTS 70kDa heat shock protein signature 396 415 - -
Cla04g00820 647 PRINTS 70kDa heat shock protein signature 477 493 - -
Cla04g00820 647 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Cla04g00820 647 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Cla04g00820 647 Gene3D - 192 366 - -
Cla04g00820 647 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Cla04g00820 647 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 628 - -
Cla04g00820 647 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Cla04g00820 647 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Cla04g00820 647 Gene3D Actin; Chain A, domain 4 235 318 - -
Cla04g00820 647 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Cla04g00820 647 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 622 IPR029048 -
Cla04g00820 647 Gene3D - 71 126 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00820 Cla-Chr4:23247541 Cla09g01948 Cla-Chr9:37053583 0 dispersed
Cla01g00179 Cla-Chr1:1799993 Cla04g00820 Cla-Chr4:23247541 0 transposed
Cla05g00551 Cla-Chr5:5024101 Cla04g00820 Cla-Chr4:23247541 1.62E-90 transposed
Cla05g01487 Cla-Chr5:23738030 Cla04g00820 Cla-Chr4:23247541 2.96E-79 transposed
Cla06g00965 Cla-Chr6:19168883 Cla04g00820 Cla-Chr4:23247541 2.80E-173 transposed
Cla08g00201 Cla-Chr8:4079068 Cla04g00820 Cla-Chr4:23247541 2.47E-17 transposed
Cla09g00198 Cla-Chr9:1967576 Cla04g00820 Cla-Chr4:23247541 9.26E-83 transposed
Cla09g00943 Cla-Chr9:9892526 Cla04g00820 Cla-Chr4:23247541 5.25E-164 transposed
Cla10g00936 Cla-Chr10:22132516 Cla04g00820 Cla-Chr4:23247541 0 transposed
Cla11g01102 Cla-Chr11:22417393 Cla04g00820 Cla-Chr4:23247541 0 transposed
Cla11g01635 Cla-Chr11:30031677 Cla04g00820 Cla-Chr4:23247541 3.53E-62 transposed
Cla04g00820 Cla-Chr4:23247541 Cla09g01941 Cla-Chr9:37014502 1.12E-39 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00820 K03283 - csv:101215599 1224.54