Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00924 ATGGGAGGTAAGTGCCCTCACAGAAGCGTAAAGAAGCGGAGATACTCGCACAAGACCGCTCGGCGCACGAAATTTCTTGTCAAAGGCGATGATATGGTTTACGATGAGTTGACGAAATTCGAGGTGGAGAAGCCTTCTCTTCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGATCGATACTTTGCGAATGTGTCTGTGAGGGATGAACATTTCAAGACCAAGCGTCACAGGAAGCGGGTAAAACTAATGACGGGTCCTGCACCTCACACGCAACTGGATGCCGAGCTAGCTGCTGGGATGGGCATGCCTGATAACGGTCCAAAGCTTATGGCAATGTGA 360 50.56 MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELTKFEVEKPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELAAGMGMPDNGPKLMAM 119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24216696 24218679 - ClCG04G009390.1 Cla04g00924 271152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00924 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Cla04g00924 119 SUPERFAMILY beta-beta-alpha zinc fingers 47 110 IPR036236 -
Cla04g00924 119 Gene3D Classic Zinc Finger 44 109 - -
Cla04g00924 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
Cla04g00924 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Cla04g00924 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00924 K14821 - csv:101222807 240.35