Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00930 ATGAGTGGCGCAAGATTCAGCATCAGAACTGGGCGAAGAAGACTGTCACAGATGACGAATTTCGCCTTCCAAGTTCTATTTGGCCGATGGTTCACCGTCTTCGCTTCTTTACTCATCATGTCCGTTTCGGGCGCCACCTACATGTTCGCACTCTACTCCGCTGACATCAAATCCTCCTTCAATTACGATCAGACCACTCTCAACCTCATCGGCTTCTTTAAGGATCTGGGTTCCAACGTCGGAGTCTTTTCCGGCCTCATCAATGAAATTACTCCGCCTTGGGTCGTCCTATTCATCGGTGGGGTAATGAACTTCTTGGGCTATTTCATGATTTGGCTTTCTGTCACTCACCGAATCCCCAAACCCAAACTGCCCGCAATGTGTTTGTTTATATGCCTAGGTGCCAATTCTCAGACCTTTGCTAATACAGGGGCTTTGATCCCTTCTGTGAGGAATTTCCCCCGGAATCGAGGTAATGTATTGGGTTTATTAAAAGGGTTTGTTGGGTTAAGTGGGGCAATTTTGACTCAGATTTACCATGCTTTTTATGGGAATGATTCTAAGGATTTTATCTTCCTTATTGCTTGGTTGCCTACTGCTGTTTCTTTCCTGCTTCTTCGGATTGTTAGAGTAGTGGAAGTGAACCCAATATTTAAATCCAATGATCTAAAAAATTTCTATTCTATGCTCTACATTTCCCTTGGTCTTGCTGGCTTCCTCATGATTTTGATTATTGTTCAAAACGAGATCATGTTTACTAGAATTCAGTATTTGGGTTGTGCGTTTGTTCTCCTAGCGTTTCTTTTTCTTCCACTTGTCGTTGTTATAAGAGAAGAATTCGCCATTAGGAAGAGGAAATTGCAAGGTGTGGATGTAACTTCTTGGCTTCCAGTTCCAACAGACCCATCTCCAGCTGAATTACCATTGCCTAGACCTTCAAGTGTGCCGACGACTGCCATAGCTTTAGCCAACCCAAGTTCTTGCTTTGAAAACGTGTTCAAACCGCCAGAAAGAGGAGAGGACTACACCATTTTACAAGCAATCTTCAGTGTAGATATGTTGATTCTGTTTGTTGCTACAATTTGTGGGGCTGGTGGGACTTTGACTGCAATGGACAACTTGGGTCAGATAGGCAGCTCCCTTGGCTACTCAACTCATACCATTTCTACTTTCACTTCTCTAGTGAGTATATGGGGCTTTCTCGGTCGAGCATTTTCGGGTTATGCTTCTGAATTCTTGTGGATGAAGTATAACTTCTCTCGCCCTCTGTTCCTCACTCTTGTGCTTCTTCTCTCTTGCGTTGGTCATCTTCTAATTGCCTCTGGAGTCCCAACCTCCCTTTATTTTGCTTCAGTTATCATTGGATTTTGCTTTGGAGCACAATGGCCATTGATTTTCGCCATTGTTTCTGAATTATTTGGCTTGAAATACTATGCAACTTTATATAGCATAAGCGGCATTGCTAGCCCAGTTGGCTCATACATTTTCAATGTGAAAGTAGCTGGCTATTTATATGACCAAGAGGCTAGAAAGCAAATGGCAGCCGTTGGTCGTAGAAGTGTAGCTGGTAGAGACTTAGATTGCAAGGGCGTCCATTGTTACAGATTAGCTTTTCTCATAATATCTGCTGCAACCGTGTTCGGTTGTGTTGTTTCATTCATTTTGGTCCTTCGAACTTGGAAATTCTATAAGGTGCCAGTCTGTGTAACACACTGTTTGTTTCAGCATGGTCGGAGATCTCGTTATTTCCCTTCTGTTCCGACATCTGAGAAAGAAGCGATTTCAGGAAATGAACTAACAATGTTGATACGATCCAAATACGAAACCAAACTTGTCGCGCTGCTTGTGCATAGAGGATCAGGAGTGGTGGATTGCCACTTTGCTCGGAAGCCACAACCAATGGAACAGCTTTTCATTCCTTTCTTTAATTATCTTCCACTTCCGCCGTTCGAAATCTCTCTCTCTCTCTTCCTGGCTCTCTGGGGCTCTGTTTCTCTGATCGGATTGATCGCCGGAATCATATCGCTCGATCATCCCGCCGGCATTCCGGCGATTCGACTCGGATGA 2067 43.88 MSGARFSIRTGRRRLSQMTNFAFQVLFGRWFTVFASLLIMSVSGATYMFALYSADIKSSFNYDQTTLNLIGFFKDLGSNVGVFSGLINEITPPWVVLFIGGVMNFLGYFMIWLSVTHRIPKPKLPAMCLFICLGANSQTFANTGALIPSVRNFPRNRGNVLGLLKGFVGLSGAILTQIYHAFYGNDSKDFIFLIAWLPTAVSFLLLRIVRVVEVNPIFKSNDLKNFYSMLYISLGLAGFLMILIIVQNEIMFTRIQYLGCAFVLLAFLFLPLVVVIREEFAIRKRKLQGVDVTSWLPVPTDPSPAELPLPRPSSVPTTAIALANPSSCFENVFKPPERGEDYTILQAIFSVDMLILFVATICGAGGTLTAMDNLGQIGSSLGYSTHTISTFTSLVSIWGFLGRAFSGYASEFLWMKYNFSRPLFLTLVLLLSCVGHLLIASGVPTSLYFASVIIGFCFGAQWPLIFAIVSELFGLKYYATLYSISGIASPVGSYIFNVKVAGYLYDQEARKQMAAVGRRSVAGRDLDCKGVHCYRLAFLIISAATVFGCVVSFILVLRTWKFYKVPVCVTHCLFQHGRRSRYFPSVPTSEKEAISGNELTMLIRSKYETKLVALLVHRGSGVVDCHFARKPQPMEQLFIPFFNYLPLPPFEISLSLFLALWGSVSLIGLIAGIISLDHPAGIPAIRLG 688
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24266568 24272988 - ClCG04G009450.2 Cla04g00930 271158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00930 688 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 565 - -
Cla04g00930 688 Gene3D MFS general substrate transporter like domains 331 563 IPR036259 -
Cla04g00930 688 SUPERFAMILY MFS general substrate transporter 30 561 IPR036259 -
Cla04g00930 688 Pfam Major Facilitator Superfamily 357 579 IPR011701 GO:0022857|GO:0055085
Cla04g00930 688 PANTHER MFS TRANSPORTER 13 565 - -
Cla04g00930 688 CDD MFS_Mch1p_like 28 549 - -
Cla04g00930 688 Pfam Nodulin-like 29 276 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01155 Cla-Chr2:24894424 Cla04g00930 Cla-Chr4:24266568 4.43E-95 dispersed
Cla04g00930 Cla-Chr4:24266568 Cla10g01901 Cla-Chr10:34901361 0 dispersed
Cla06g01617 Cla-Chr6:29707001 Cla04g00930 Cla-Chr4:24266568 1.12E-99 dispersed
Cla06g01618 Cla-Chr6:29708540 Cla04g00930 Cla-Chr4:24266568 3.46E-106 dispersed
Cla10g01898 Cla-Chr10:34867960 Cla04g00930 Cla-Chr4:24266568 1.43E-15 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00930 - - csv:101203981 1007.67