Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00941 ATGGCTTCTACTCTCTGTTTTCCCTCAATCACTTTCCCCTCCTCTCCCTTCCACAAACGAATCCCTCTCAGACGAAGAACCCCATCTCCTTATCCCTCCATTAAATCCTCCATTGACGAAGGAGGAAATCCCTCAACGCCCGCAAAGCTTAAGAACTCCACAAGCACTGCAAAATCCGGCTCCTGGGTCAGCCCTGATTGGCTCACCTCTCTAACTCGTTACATTACTCTAGGGCAGGGCGACGACTCCGGCATCCCCATTGCAACTGCCAAGCTCGATGACGTTTCTGATCTTCTCGGCGGTGCTCTTTTCCTTCCACTTTTCAAGTGGATGAATGACTATGGACCCATTTACAGGCTGGCTGCTGGCCCTAGAAATTTTGTCGTCGTTAGTGATCCTGCCATTGCTAAGCACGTTCTCAGGAACTATGGGACTTACGCTAAAGGCCTTGTTTCTGAGGTTTCCGAGTTCTTGTTTGGGTCAGGTTTCGCCATTGCAGAAGGCCCTCTCTGGACGGTTCGCCGTAGGGCTGTGGTTCCATCTCTTCACAAGAAGTACTTATCGGTTATTGTCGATCGAGTATTTTGTAAATGTGCCACGAGATTGGTGGAGAAGCTGGAAAAGGATGCATTAAATAATAATTCGGTTAACATGGAGGAAAAGTTTTCTCAACTAACTCTTGATGTTATTGGTCTATCTGTATTCAACTACAGTTTTGATTCTCTCTCTACTGACAGCCCAGTGATTGATGCAGTTTACACTGCTTTGAAAGAGGCAGAGGCTCGTTCTACTGATATTTTACCATATTGGAAGGCAGGTTTGCGTATACAGATAAAAGCTGAAGAAGCAGTTACGGTGATCAGGAGAACTGTTGAAGAACTCATTGCCAAGTGCAAAGAAATTGTTGAAAGTGAGGGTGAGCGTATTGATGAGGAGGAATATGTGAATGATGCTGATCCAAGCATCCTCCGATTTCTGCTGGCCAGTAGAGAAGAGGTCTCAAGTGTACAGTTACGAGACGACCTATTGTCCATGTTGGTTGCTGGGCATGAAACTACTGGTTCTGTTCTGACTTGGACACTGTATCTTTTAAGTAAGCATTCCTCATCATTGGTCAAGGCACAAAATGAAGTTGATAGAGTGTTACAAGGAAGGCCTCCTTCTTATGAAGATACGAAGGAACTTAAATATTTGACACGTTGTATCCTTGAGTCAATGCGACTTTACCCACATCCACCTGTTTTGATAAGAAGAGCTCAAGTTGCCGACATACTCCCCGGAAATTACAAGGTTAATGCTGGTCAAGATATCATGATTTCAGTATATAACATCCATCGCTCTTCCCAGGTCTGGGAACAATCAGAAGAGTTTATACCAGAAAGATTTGACTTGGAAGGCCCTGTGCCTAATGAAAGCAATACAGATTTCAGATTTATTCCGTTCAGCGGTGGACCTCGAAAATGTGTCGGTGATCAATTTGCCTTGCTTGAAGCTATTGTTGCACTTGCCATATTTCTACAGCATATGAATTTCGAGCTGGTTCCAAATCAGACCATTGGGATGACTACTGGAGCAACTATACATACAACAAACGGTTTGTACATGAAACTCAGCCAAAGGAAGCTGACCCAAGAGTTAGTTTCTCCTGCATCTTCAAGTACAGTGAGATGCAACTTAGTTTCAATGGAGATGAGTTGGTATGGTATCATGGGATGTGGGGAAAAGGAGATGCCAATGCCAAAAGCATATCCCTTGGAAGATGCTGAAAATTGCAGCCTTTTCAATCGCTTTCTACTTTTCTATTGA 1806 44.13 MASTLCFPSITFPSSPFHKRIPLRRRTPSPYPSIKSSIDEGGNPSTPAKLKNSTSTAKSGSWVSPDWLTSLTRYITLGQGDDSGIPIATAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTYAKGLVSEVSEFLFGSGFAIAEGPLWTVRRRAVVPSLHKKYLSVIVDRVFCKCATRLVEKLEKDALNNNSVNMEEKFSQLTLDVIGLSVFNYSFDSLSTDSPVIDAVYTALKEAEARSTDILPYWKAGLRIQIKAEEAVTVIRRTVEELIAKCKEIVESEGERIDEEEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKHSSSLVKAQNEVDRVLQGRPPSYEDTKELKYLTRCILESMRLYPHPPVLIRRAQVADILPGNYKVNAGQDIMISVYNIHRSSQVWEQSEEFIPERFDLEGPVPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPNQTIGMTTGATIHTTNGLYMKLSQRKLTQELVSPASSSTVRCNLVSMEMSWYGIMGCGEKEMPMPKAYPLEDAENCSLFNRFLLFY 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24463836 24470764 - ClCG04G009560.2 Cla04g00941 271169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00941 601 Gene3D Cytochrome P450 90 557 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g00941 601 PRINTS E-class P450 group I signature 357 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g00941 601 PRINTS E-class P450 group I signature 337 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g00941 601 PRINTS E-class P450 group I signature 440 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g00941 601 PRINTS E-class P450 group I signature 111 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g00941 601 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g00941 601 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g00941 601 MobiDBLite consensus disorder prediction 23 58 - -
Cla04g00941 601 MobiDBLite consensus disorder prediction 30 58 - -
Cla04g00941 601 PANTHER CYTOCHROME P450 FAMILY 4 123 540 - -
Cla04g00941 601 SUPERFAMILY Cytochrome P450 100 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g00941 601 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g00941 601 PRINTS P450 superfamily signature 348 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g00941 601 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g00941 601 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g00941 601 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Cla04g00941 601 PANTHER CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC 123 540 - -
Cla04g00941 601 Pfam Cytochrome P450 107 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00941 Cla-Chr4:24463836 Cla10g00773 Cla-Chr10:14294133 2.52E-155 dispersed
Cla04g00941 Cla-Chr4:24463836 Cla11g00257 Cla-Chr11:2992425 4.54E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00941 K09837 - csv:101204961 1007.67