Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00949 ATGGCCGCAATCCCTCTTTTCCCATTACAATTCTCCTTCTTCTTTCTCTTCTTTTGTATTAACCCTGAAATCAACCAGCTTTCACTCCAATTTTTCCCTTCTTCAACCTTCACACACATGAAGTTGCCGGTTTTTATAATTCCTCTCATCGCTCTTTCTTGTTTTATTGCTGTTTTGGGTCCTCAGTTCTCCACAGATTGGACCATTTTCTTTGATAAATATGCTTCAATCCAGACCTCTGTTTCTTCTTCCTCCCAAACAGAGGATTTCCATTCTAATACCTCCGCCGCCGCCGCCGCGAAGGATCAAACAGTAGAACACCTTCACCAACCTCTGTTCAATCACTCTCTTTTCTCGAATCACTCTGTTTTCTCAAACCACTCTGTTTTTTCTTCTTCTTCTTCTCCTCCATCGCCACCACCGAACGACGAAATGCAGAGTCTTCACCTACACTCTAATAGGACGAGAGTCAACGAAGATTTGGGAGAAACCGCCATTAATGAAGTGATCGGAAACGTTTCTTCTGAAAGTAATTATGAATCGGCGGTGACAGTGAAAGCGAGAAGACAAAGGGAATATACAAAATTAGAGAGAATCGAAGCAGGGCTAAGAAGAGCAAGAGCCGCCATTAGAGAAGCCAAGTTCCATAACCAAACTCAAGATCCTGACTTTGTTCCTTCTGGCCCAATGTATTGGAATTCCAAAGCGTTTCACAGGAGTTACCTAGAAATGGAGAAGGATATGAAGATCTTCGTGTACGAAGAAGGAGAGCCTCCTCTGTTTCACAATGGCCCTTGCAAGAGCATTTACTCAACCGAAGGCAACTTCATCCACGCCATCGAAATGGACTCCCGGTTTCGAACCAAAGATCCCGAAAAGGCCCATGTCTTCTTCCTTCCTCTCAGCGTTGCAATGCTCGTTCGGTTCGTCTATGTTCATGACTCACACGACTTCACTCCAATACGACACACCGTTGTTGATTACATCAATGTCATTGGAACCAAATATCCGTTCTGGAATCGCACACTTGGTGCTGATCATTTCATGCTCTCCTGTCATGATTGGGGCCCAGAAGCATCGAAGTCAGTTCCCCATTTATACAAAAACTCGATCCGAGTACTTTGCAACGCCAACACTTCCGAAGGCTTCAACCCATCAAAGGATGTATCATTCCCAGAAATCAATCTACAGACAGGTTTCTTGACCGGATTTCTTGGCGGTCCATCTCCCTCGCGCCGCCCAATTCTGGCCTTCTTCGCCGGTGGGCTTCACGGCCCAATAAGGCCCATTCTAATCCAGCAATGGGAGAACCAAGACCAAGACATTCAAGTCCACCAGTACCTCCCCAAAGGGGTCTCTTACATTGACATGATGAGGAAGAGCAAGTTCTGCCTCTGCCCCAGCGGCTACGAAGTCGCCAGTCCAAGAATTGTCGAGGCCATTTACACCGGCTGCATTCCTGTCCTAATTTCCGACCACTACGTCCCACCATTCAGCGATGTCATCAATTGGAAATCTTTCTCCGTGGAAGTCTCGATCGATGACATTCCAAACTTGAAGACAATCCTGACCGGGATATCGACGCGGCAGTACTTGAGAATGTATAGGAGAGTGGTGAAAGTTAGGAGACACTTTGAAGTGAACTCTCCGCCGAAGAGATTTGATGTGTATCATATGATACTTCATTCTGTGTGGCTTAGAAGACTCAATCTTAGACTGCGTGATCGTTGA 1731 45.93 MAAIPLFPLQFSFFFLFFCINPEINQLSLQFFPSSTFTHMKLPVFIIPLIALSCFIAVLGPQFSTDWTIFFDKYASIQTSVSSSSQTEDFHSNTSAAAAAKDQTVEHLHQPLFNHSLFSNHSVFSNHSVFSSSSSPPSPPPNDEMQSLHLHSNRTRVNEDLGETAINEVIGNVSSESNYESAVTVKARRQREYTKLERIEAGLRRARAAIREAKFHNQTQDPDFVPSGPMYWNSKAFHRSYLEMEKDMKIFVYEEGEPPLFHNGPCKSIYSTEGNFIHAIEMDSRFRTKDPEKAHVFFLPLSVAMLVRFVYVHDSHDFTPIRHTVVDYINVIGTKYPFWNRTLGADHFMLSCHDWGPEASKSVPHLYKNSIRVLCNANTSEGFNPSKDVSFPEINLQTGFLTGFLGGPSPSRRPILAFFAGGLHGPIRPILIQQWENQDQDIQVHQYLPKGVSYIDMMRKSKFCLCPSGYEVASPRIVEAIYTGCIPVLISDHYVPPFSDVINWKSFSVEVSIDDIPNLKTILTGISTRQYLRMYRRVVKVRRHFEVNSPPKRFDVYHMILHSVWLRRLNLRLRDR 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24559702 24563009 + ClCG04G009640.2 Cla04g00949 271177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00949 576 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 271 494 - -
Cla04g00949 576 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 164 574 IPR004263 GO:0006486|GO:0016757
Cla04g00949 576 PANTHER EXOSTOSIN FAMILY PROTEIN 164 574 - -
Cla04g00949 576 Pfam Exostosin family 245 524 IPR040911 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00361 Cla-Chr4:13400872 Cla04g00949 Cla-Chr4:24559702 8.23E-87 dispersed
Cla04g00949 Cla-Chr4:24559702 Cla08g01344 Cla-Chr8:26278320 3.11E-156 dispersed
Cla04g00949 Cla-Chr4:24559702 Cla08g00151 Cla-Chr8:2940551 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00949 - - csv:101205910 894.034