Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla04g00971 | ATGGGATCTGGTACTTGTGAAATTGTTGAAGCAAGGGAAGAAATAAAACCTGTTCAAAGTAAGGCAGGATCTCGTCATTCAGATTTTGTATCAGACAAAGATCGAAGACTTTCTGCATTGAAAATTGGATTCAAGGGATCTCTAGAGGATGATATCAATCAGCTTTTTGAGTCAATTAGTATTAAAAATGCATCCAAGAGTTTAGGTCATTCGCAAGTCGAGGTAAATGCACTGAGAAAAAGTACACTTAAGAAGCCAATAACTGTTGGCATACCTCGGTCACCAGGTATTGGTACTTCTGATTCTGGTAGTCTGAAGCAAGCACTTAGGGAACTATGCCTTTCAAAGGCGTCTGAAATGGCTGCTATGAAGAGATCATCAAAATCATCCAGCTCTTCAAGAATCTCAGAAGCTGGGCGGATCAAGACATTGTATAATTCAGTTATGGTTGAAGCCACTGAGTCAGGCTCTTCTTCAGATAAGGGGGGACGTGTGGTTGAAATTTCCCTGGTTCCAGAGGAAAAGAAATTGAACTTTGAGAAGAGACTTGAGCATGTCCAGGCATCTGCTGTTAAATCACTGGTTGAAAGTGCTCATTCTTCTCAGTTGCCCGCTGCGAAAACAAAAAAAAATGTTGAGGTTGTTACTGTGGAACAAAACGTCAATCCCACTTTGTCAAGGAAAGTTGGATCTCAAACATTAAAGGCAGAGCTGGAGAAGGAAGAAGAGTCCATTACTCCACCATCTATATCTTCTTGCACTATTGGCAAGGTCTTAGAGAAGGAGAAGAAAATTCTTGCCGGAAGCAGGGTAGCAAATAAAGTGGCATCATCTAAGGCAGGACGGAAAGGTAGGTTGCAAACTGCATCTTCATCTAAGTTGGGTAGTGGCAATAAGGTAACCAAGTTATCTAGAAGTGCCTCCCGTTCTGTTAAACCAGTTATTAGAAACAAGGGGCTGGCTAAGAAGAAAGTCAAACAGGATTTGAGTTCTCCAACATGTAGTTCAAGCACATACAATGCAGTCAATGGTGATACGGATCCTAGTAAAAGGAAGTTGATATGTGAGAGGTGCCACTGTGCAATGAATAGTGCAGCTAAAGACTCAAAGAAGGGCGCTGCATCCCAGTTTAGTGGTCTTTGTCCTGATGTAAACATGACCAATTCAAAATCTGGTGTTAACAAATCAGGCTTCAATGTGGATGGCAAGGCTTCTGATGTTAAAGTAAAAAGAAATACAAGGGTGCGGGATAAGGGTGAATTTTCTCAAAGCTCAAAAAGTAGTCAAGGTGAGTACAGTAGCAGTACGACGAGTATTATAAGTGACGATAGCAATGGGCACGGACCCAGTAATGGTAACAGACCTCATATGTCAAAAGATGTTAGGTGGGAAGCCATACGCCATGCACAATTGCAGTATGGGGTCCTCAGCTTGCGGCATTTTAATCTTTTAAAGAAGCTTGGTTGTGGGGACATTGGAACAGTGTATCTTGCTGAGCTAACCGGCACTAATTGCCTCTTTGCCATTAAGGTCATGGATAATGAGTTTCTAGCAAGACGGAAGAAAATGCCTAGAGCACAAACTGAGAGAGAAATACTGAGAATGCTAGATCATCCATTCCTCCCTACACTTTATGTTCAATTTACTTCAGATAATCTATCATGTCTCGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTGCGGCAGAAGCAGCTAGGCAGAGTTTTTCCTGAACCCGCAGCAAGATTTTATGTTGCTGAGGTCCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTATTTATCGAGATTTAAAACCTGAGAACATTCTTGTCAGGGAAGATGGTCACATAATGCTTACCGACTTTGACCTGTCGCTTAGGTGCACGGTCAATCCAACACTCTTGAAGTCATCATCCTTCAATGCGGACTTGGTGAAAACATCAGGTCCCTGTACAGATTCTAGTTGTGCTGAGCCATTTTGCATTGAACCATCATGTCAAGTCCCATGCTTCAGCCCCAGGTTTCTACCTGCTGCTGCCAAAACAAGGAAGTCAAAACTTGACCTCACAACACAGTTCAGGTCATTGCCCCAGCTCGTTGCTGAACCCACCGATGCACGTTCGAATTCCTTTGTTGGCACTCATGAGTATTTGGCTCCCGAGATCATTAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACGTTTGGTGTTTTTCTCTATGAGCTTCTGTATGGTAAAACCCCTTTCAAGGGTTCCAATAATGAAGAAACATTAGCCAATGTAATAATGCAGGGCCTCAGTTTTCCCGACAGCCCAATTGTTAGTTTCCAAGCGAGGGATCTTATCCGAGGACTGTTGGTAAAAGAACCCGAACACCGATTCGGGACAGAGAAAGGGGCTGCAGAGATCAAACAGCACCCGTTCTTCGAGGGGCTAAACTGGGCATTGATCCGGTGTGCAGTTCCTCCAGAACTTCCAGACTTATGTGATATGGACATTACAAGTATGATTGCTCAACAAAACAAGTTCAGGTACTTGGAAAACAAGTCCACCGGAGAACACCTTGAGTTCGAATTGTTTTAG | 2598 | 43.26 | MGSGTCEIVEAREEIKPVQSKAGSRHSDFVSDKDRRLSALKIGFKGSLEDDINQLFESISIKNASKSLGHSQVEVNALRKSTLKKPITVGIPRSPGIGTSDSGSLKQALRELCLSKASEMAAMKRSSKSSSSSRISEAGRIKTLYNSVMVEATESGSSSDKGGRVVEISLVPEEKKLNFEKRLEHVQASAVKSLVESAHSSQLPAAKTKKNVEVVTVEQNVNPTLSRKVGSQTLKAELEKEEESITPPSISSCTIGKVLEKEKKILAGSRVANKVASSKAGRKGRLQTASSSKLGSGNKVTKLSRSASRSVKPVIRNKGLAKKKVKQDLSSPTCSSSTYNAVNGDTDPSKRKLICERCHCAMNSAAKDSKKGAASQFSGLCPDVNMTNSKSGVNKSGFNVDGKASDVKVKRNTRVRDKGEFSQSSKSSQGEYSSSTTSIISDDSNGHGPSNGNRPHMSKDVRWEAIRHAQLQYGVLSLRHFNLLKKLGCGDIGTVYLAELTGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVNPTLLKSSSFNADLVKTSGPCTDSSCAEPFCIEPSCQVPCFSPRFLPAAAKTRKSKLDLTTQFRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGKTPFKGSNNEETLANVIMQGLSFPDSPIVSFQARDLIRGLLVKEPEHRFGTEKGAAEIKQHPFFEGLNWALIRCAVPPELPDLCDMDITSMIAQQNKFRYLENKSTGEHLEFELF | 865 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 24841948 | 24846925 | - | ClCG04G009860.1 | Cla04g00971 | 271199 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla04g00971 | 865 | ProSiteProfiles | Protein kinase domain profile. | 481 | 814 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla04g00971 | 865 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 3 | 865 | - | - | |
Cla04g00971 | 865 | MobiDBLite | consensus disorder prediction | 283 | 311 | - | - | |
Cla04g00971 | 865 | Pfam | Protein kinase domain | 711 | 814 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla04g00971 | 865 | Pfam | Protein kinase domain | 482 | 632 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla04g00971 | 865 | MobiDBLite | consensus disorder prediction | 271 | 336 | - | - | |
Cla04g00971 | 865 | MobiDBLite | consensus disorder prediction | 404 | 421 | - | - | |
Cla04g00971 | 865 | PANTHER | FLIPPASE KINASE 1-RELATED | 3 | 865 | - | - | |
Cla04g00971 | 865 | SMART | serkin_6 | 481 | 814 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla04g00971 | 865 | Gene3D | Transferase(Phosphotransferase) domain 1 | 707 | 832 | - | - | |
Cla04g00971 | 865 | MobiDBLite | consensus disorder prediction | 422 | 452 | - | - | |
Cla04g00971 | 865 | Gene3D | Transferase(Phosphotransferase) domain 1 | 561 | 630 | - | - | |
Cla04g00971 | 865 | MobiDBLite | consensus disorder prediction | 391 | 457 | - | - | |
Cla04g00971 | 865 | CDD | STKc_phototropin_like | 479 | 835 | - | - | |
Cla04g00971 | 865 | SUPERFAMILY | Protein kinase-like (PK-like) | 456 | 832 | IPR011009 | - | |
Cla04g00971 | 865 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 602 | 614 | IPR008271 | GO:0004672|GO:0006468 | |
Cla04g00971 | 865 | Gene3D | Phosphorylase Kinase; domain 1 | 479 | 560 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01115 | Cla-Chr1:18346000 | Cla04g00971 | Cla-Chr4:24841948 | 0 | dispersed | |
Cla04g00971 | Cla-Chr4:24841948 | Cla10g01319 | Cla-Chr10:28103576 | 0 | dispersed | |
Cla09g00796 | Cla-Chr9:8126349 | Cla04g00971 | Cla-Chr4:24841948 | 1.53E-71 | dispersed | |
Cla02g02140 | Cla-Chr2:36457569 | Cla04g00971 | Cla-Chr4:24841948 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80507 | PF00069 | Pkinase | 5.90E-36 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla04g00971 | - | K08286 | csv:101210027 | 1519.6 |