Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g00975 ATGAAGCTGCACGAGAATCTTTTTGTATTTGTATTGCTTCTTTGGCTTGTTGCCTCATTTATGATCCACGGTTCAAACCACCATGAAATTAGAAAGCCATACATCGTGTATATGGGAGACTTGCCCGGCGGATCTCTGTCGTCCACGCTGGCGGATGACCACCACAACCTGCTTTTGGACGCCATTGGAGATGAAAAGATAGCGAGAGAGTCCAAAATCTACAGCTATGGAAAGAGCTTCAATGGGTTCGCCGCAAGACTTTTGCCTCACGAAGCCACCAAGCTGTCAAATGAGGAGGGTGTGGTTTCGGTATTTCGTAGCAGAAAGCAAAGAGTAGTGACGACAAGATCCTGGGACTTTTTGGGATTAGATCATCATTATTCCAAACGTAAACCTAAAATTGAGTCTAATCTCATTGTCGCCGTTTTGGATACAGGGATTTGGATTGACAGTCCTAGTTTCAACGATGAAGGCTATGGCCCACCACCCTCTAAATGGAAGGGCAAATGCGTCACTGGTCCCAACTTCACAGCCTGCAACAACAAAGTAATCGGTGCGAATTACTTCGATCTGGAAAACGTAAGCCAATATCCAGAGTCGAGCGTGGCGGACACGGAGGGCCACGGCTCTCACACGGCGTCCACGGTGGCAGGTTCGGCCGTGGAGGGGGCGAGCTTGTACGGCCTGGCCAAAGGGACGGCGCGCGGCGGCGTGCCTTCAGCTCGAATTGCAGTCTACAAAGTGTGTTGGAGCATTTTCTGCAGCGAAATGGACGTTCTTGCTGGCTTCGATGAGGCAATCGCCGATGGCGTCGATTTGATTTCCGTCTCCATAGGGTCGCCGCCGATGGATTTCTTCAGGGACAGCCAAGCAATTGGGGCTTTTCATGCCATGAAGAAGGGAATTTTGACGTCCTGCGCCGCCGGCAACGACGGCCCTGAATTGTCCACCGTCGAGAATGTGGCGCCCTGGATTATGACCGTCGCTGCTACGGCCATTGATAGACGGTTCGTCACCGCTTTCAAACTCGGTAATGGCAACAAATTTACTGGACGTTCCATCAACACCTTCTCGCCAGAGAAAGAAATGTACTCTCTTACAAGCGGAGCCAAAGCGTCCAACAATGGCACACCCTATCAAGGAAATGCAAGTGCTTGTGATCCAGAAGCTATAAGCCAAAGCAAAGTGAAGGGAAAGATTGTATATTGCTTGAAAACTTACACAGACCCCTACATCAAATCCTTAGGAGGCACTGGAGTCATTCAACTCACTCGACAACAAGCTGATTATTCCTCCATTTTGCTTCTTCCTGGGGTTACCATCCCCTCACTCTCTGGCAAATACATTGATCTTTATATCAACTCCACCAAGAATCCTAAAGCTGTCATTTATAAGAGTAAAACTGTCAGAATTGATGCTCCCTTTGTTGCTTCTTTCTCATCTAGAGGGCCTCAGTTTATCAGTAGTAACATTCTCAAGCCTGATCTTTCTGCACCAGGGATAGAAATCTTGGCTGCTTATACAAAACTAGCGAGTTTGACAGGGGATATGTCAGACAGTAGATATAGTTTATTCACTGTAATGTCAGGTACATCCATGGCCTGTCCTCATGCCACGGCGGCGGCTGCATATGTTAAGTCATTCCACCCCGACTGGTCTCCGGCTGCGGTCAAGTCTGCTCTCATGACCACTGCAACTCCAATGAAGATCAAATCCAAGGACGCTGTACTTGGCTCTGGAGCAGGACAAATAAATCCAACCAAGGCAGTGCATCCCGGCCTTATTTACAACATTTCGTTCAACTCCTACATCTCTTTCCTCTGCAAAGAAGGCTACAACAGCACAACAATCGGCCTACTTGATGGTAACAAGAAGCACAACTGCTCCAAGATCAAGCCTGCACAAGGAACCGATGGTCTCAACTACCCTACAATGCACAAACAGCTCTCAGATCCTGGTTCAGCCATCAAGGCGGTCTTTTATCGAACAGTGACTCATGTTGGGTATGGTCCATCATTGTACAGGGCAAATATATCATCTCCAGATGGCCTATCTGTCAAAGTTTTTCCAGACACCCTAAATTTTGTTAAGTTACATGAAACGAAAACATTTAAAGTTGTGGAAATTGATCTAAATTTTGATATGGTCTTTGGTAGCAAACTAGATGATCAGTCGCTAGAAGAGATGCAGGTTTTGTTTTTGTTTACACGAGAGGACATGGAGAATCATCGGACAGCGAAAGCTTTGGAGAGGCGTTACAATGTCCATAGGATTCAATATTCGCCCACAAAAAGAGTTCAGAAGAGCAATTTAAAGCAGGATAGTCAGCTACACAGCCAATTCTCGGACCGGCTCCTGTTGTCCACTTAA 2370 47.05 MKLHENLFVFVLLLWLVASFMIHGSNHHEIRKPYIVYMGDLPGGSLSSTLADDHHNLLLDAIGDEKIARESKIYSYGKSFNGFAARLLPHEATKLSNEEGVVSVFRSRKQRVVTTRSWDFLGLDHHYSKRKPKIESNLIVAVLDTGIWIDSPSFNDEGYGPPPSKWKGKCVTGPNFTACNNKVIGANYFDLENVSQYPESSVADTEGHGSHTASTVAGSAVEGASLYGLAKGTARGGVPSARIAVYKVCWSIFCSEMDVLAGFDEAIADGVDLISVSIGSPPMDFFRDSQAIGAFHAMKKGILTSCAAGNDGPELSTVENVAPWIMTVAATAIDRRFVTAFKLGNGNKFTGRSINTFSPEKEMYSLTSGAKASNNGTPYQGNASACDPEAISQSKVKGKIVYCLKTYTDPYIKSLGGTGVIQLTRQQADYSSILLLPGVTIPSLSGKYIDLYINSTKNPKAVIYKSKTVRIDAPFVASFSSRGPQFISSNILKPDLSAPGIEILAAYTKLASLTGDMSDSRYSLFTVMSGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIKSKDAVLGSGAGQINPTKAVHPGLIYNISFNSYISFLCKEGYNSTTIGLLDGNKKHNCSKIKPAQGTDGLNYPTMHKQLSDPGSAIKAVFYRTVTHVGYGPSLYRANISSPDGLSVKVFPDTLNFVKLHETKTFKVVEIDLNFDMVFGSKLDDQSLEEMQVLFLFTREDMENHRTAKALERRYNVHRIQYSPTKRVQKSNLKQDSQLHSQFSDRLLLST 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24875088 24880280 - ClCG04G009900.2 Cla04g00975 271203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g00975 789 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 112 IPR037045 -
Cla04g00975 789 Gene3D - 607 720 - -
Cla04g00975 789 Pfam Subtilase family 136 573 IPR000209 GO:0006508|GO:0008236
Cla04g00975 789 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
Cla04g00975 789 Pfam Fibronectin type-III domain 640 707 IPR041469 -
Cla04g00975 789 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Cla04g00975 789 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 712 IPR045051 -
Cla04g00975 789 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 140 150 IPR023827 -
Cla04g00975 789 PANTHER CUCUMISIN PROTEIN 23 712 - -
Cla04g00975 789 CDD PA_subtilisin_like 341 463 - -
Cla04g00975 789 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Cla04g00975 789 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Cla04g00975 789 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Cla04g00975 789 SUPERFAMILY Subtilisin-like 5 617 IPR036852 GO:0004252|GO:0006508
Cla04g00975 789 ProSiteProfiles Serine proteases, subtilase domain profile. 117 590 - -
Cla04g00975 789 Gene3D Peptidase S8/S53 domain 138 603 IPR036852 GO:0004252|GO:0006508
Cla04g00975 789 CDD Peptidases_S8_3 114 566 IPR034197 -
Cla04g00975 789 Gene3D - 334 469 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00975 Cla-Chr4:24875088 Cla07g00629 Cla-Chr7:11999095 0 dispersed
Cla01g00097 Cla-Chr1:875191 Cla04g00975 Cla-Chr4:24875088 0 transposed
Cla05g02221 Cla-Chr5:33880920 Cla04g00975 Cla-Chr4:24875088 0 transposed
Cla10g01819 Cla-Chr10:34082431 Cla04g00975 Cla-Chr4:24875088 8.13E-98 transposed
Cla10g01818 Cla-Chr10:34080566 Cla04g00975 Cla-Chr4:24875088 1.30E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g00975 - - csv:101207592 1261.9