Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g01034 ATGCAAACCCAGATGGGAACTCGTTTCATTTCTTTCTTTCTTTTGGGATTCTGTTTTCTACTTCCCACTGTGAAACCAGATCTTGCTTCTGATAGAACAGCTCTTTTGGCCCTTCGTTCTGCTGTGGGTGGCCGAACTCTTATGCTTTGGAATGTGACTGATCAGAACCCCTGTTCTTGGCCTGGGATTCAATGCGAGGACAATCGTGTCACTGTTCTTCGTCTTCCCGGAGCGGCGCTTTTCGGTCAATTACCGAATGGGATTTTTGGGAACTTGACTCACCTTCGTACACTCAGCCTTCGGCTCAATGCCCTTTCCGGTCAGCTCCCCTCAGATCTCTCTGCCTGCATTAATCTTCGCAACCTCTATTTGCAAGGTAATGAGTTTTCAGGCCTTGTCCCTGATTTCTTGTTTCAGCTTCGTGACCTTGTTCGTCTTAATTTGGCTTCCAATAACTTTTCTGGGGAGATCTCTTTCGGGTTCAACAATTTGACCCGTCTCAAAACTCTGTTCCTTGAGAAAAATCATCTCTCTGGGTCTATCCCGGACTTGAAGATCCCTCTGGATCAGTTCAACGTTTCTAACAATCAGTTAAATGGGTCGGTACCTAAGGGATTGCAGTCGTTTTCTTCGAGTTCCTTTTTGGGGAATTCTCTCTGTGGGCGTCCTCTTGAGTCTTGCTCTGGTGATCTTGTTGTGCCGACAGGGGAGGTTGGGAGCAATGGCGGCTCTGGACACAAGAAAAAGTTGTCAGGGGGAGCCATTGCTGGGATTGTTATTGGATCTGTACTGGGTTTTGTGTTGATACTTGTAATCTTAATGCTTTTGTGCCGAAAGAAGAGTTCTAAGAAAACGAGTTCAGTCGATGTAGCCACAGTGAAGCATCCTGAAGTGGAAATTCATGGCGGTAAGCCAGCTGAGGAGATTGAAAATGGGGGTTACAGTAATGGTTATGCTGTGCCAGCCACTGCTGCTGCTGCTTCTGCTGCAACAGTGGCGGCCGGTACTGCAAAGGGGGAAGTGAATGCCAATGGTACGGGGACTAAAAAATTGGTGTTTTTTGGCAATGCTGCAAGGGTGTTTGATTTGGAGGATCTTTTGAGGGCTTCAGCTGAAGTGTTGGGGAAAGGAACCTTTGGGACTGCTTACAAAGCAGTTTTGGAAGTGGGTTCTGTTGTGGCTGTGAAGAGGTTGAAGGATGTTACTATAACAGAGAGGGAATTCAGAGAGAAGATTGAAGCTGTTGGATCTATGGATCATGAAAATTTGGTCCCTCTCAGGGCCTACTATTTCAGTAGGGATGAGAAGCTTCTTGTCTATGATTACATGGCCATGGGAAGCTTATCTGCTCTTTTACATGGAAACAAAGGAGCTGGCAGGACTCCATTGAATTGGGAAATCAGATCTGGAATTGCGCTTGGAGCTGCTCGTGGCATTGAATATCTGCATTCTCAAGGCCCTAATGTTTCCCATGGAAACATAAAATCTTCCAATATTCTTCTAACAAAATCCTATGATTCTCGAGTCTCCGATTTCGGTTTAGCACATCTTGTTGGACCACCTTCCAGCCCCACCAGAGTTGCTGGTTACCGTGCACCAGAGGTCACCGATCCTCGTAAAGTATCCCACAAGGCTGATGTCTATAGCTTTGGCGTATTGCTTTTGGAGCTTTTGACAGGAAAGGCTCCTACTCACTCCCTTTTAAACGAGGAAGGAGTTGATCTACCCAGATGGGTGCAGTCAGTTGTTAGGGAGGAGTGGACTTCCGAAGTTTTTGACCTCGAGCTTCTTAGGTACCAAAACGTTGAGGAGGAGATGGTTCAGCTATTGCAGCTTGCAGTCGATTGTGCAGCTCAGTATCCTGATAAGCGTCCTACTATGTCCGAAGTCACAAAGCGTATAGAAGAGCTTCGCCAATCCAGCCTTCACGAAGCTGTCAATCCACAACCCGACGCTGCTCATGACTCAGACGATGTGTCTTCTAGGTGA 1989 46.81 MQTQMGTRFISFFLLGFCFLLPTVKPDLASDRTALLALRSAVGGRTLMLWNVTDQNPCSWPGIQCEDNRVTVLRLPGAALFGQLPNGIFGNLTHLRTLSLRLNALSGQLPSDLSACINLRNLYLQGNEFSGLVPDFLFQLRDLVRLNLASNNFSGEISFGFNNLTRLKTLFLEKNHLSGSIPDLKIPLDQFNVSNNQLNGSVPKGLQSFSSSSFLGNSLCGRPLESCSGDLVVPTGEVGSNGGSGHKKKLSGGAIAGIVIGSVLGFVLILVILMLLCRKKSSKKTSSVDVATVKHPEVEIHGGKPAEEIENGGYSNGYAVPATAAAASAATVAAGTAKGEVNANGTGTKKLVFFGNAARVFDLEDLLRASAEVLGKGTFGTAYKAVLEVGSVVAVKRLKDVTITEREFREKIEAVGSMDHENLVPLRAYYFSRDEKLLVYDYMAMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDSRVSDFGLAHLVGPPSSPTRVAGYRAPEVTDPRKVSHKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPTMSEVTKRIEELRQSSLHEAVNPQPDAAHDSDDVSSR 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25495753 25498730 + ClCG04G010510.1 Cla04g01034 271262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g01034 662 PANTHER OS05G0588300 PROTEIN 12 657 - -
Cla04g01034 662 Gene3D Transferase(Phosphotransferase) domain 1 443 658 - -
Cla04g01034 662 MobiDBLite consensus disorder prediction 639 662 - -
Cla04g01034 662 SUPERFAMILY L domain-like 31 212 - -
Cla04g01034 662 Pfam Protein kinase domain 371 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla04g01034 662 Gene3D Ribonuclease Inhibitor 187 230 IPR032675 -
Cla04g01034 662 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Cla04g01034 662 SUPERFAMILY Protein kinase-like (PK-like) 372 642 IPR011009 -
Cla04g01034 662 ProSiteProfiles Protein kinase domain profile. 368 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla04g01034 662 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Cla04g01034 662 CDD STKc_IRAK 374 637 - -
Cla04g01034 662 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
Cla04g01034 662 Gene3D Phosphorylase Kinase; domain 1 336 442 - -
Cla04g01034 662 PANTHER INACTIVE RECEPTOR KINASE-RELATED 12 657 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g01034 Cla-Chr4:25495753 Cla05g01211 Cla-Chr5:13547561 0 dispersed
Cla04g01034 Cla-Chr4:25495753 Cla06g01042 Cla-Chr6:22563430 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80509 PF00069 Pkinase 4.60E-39 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g01034 - - csv:101222458 1185.24