Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g01055 ATGCTGCAATTCAATGGCGGAGAACTGAATCAGAACCGAGGAAGGCGACCGCTGGTTTTATACGGTTTGATACATATTGTAATCGAATTGACGTTAATCTGCTCTACCATGGATCGCCTCAATAAGGCGAAGGGAGCCAAATCTTTAACTATGTTTGATTCTGGAATTCTGGCCTTTTGTGCCTCTTTTCCACTTTTTTGTTTTTCACTGCTGCTGATTCTTCTGCAGGGTGATAAGCAATCAGAATTTTTCACAGAGTATGGAGAAGCAAGCCGATACCAAATTCAAGAAGTTGTTGGGAAAGGAAGCTATGGAGTTGTTGGTTCTGCAATTGATACCCAGACTGGTGAAAGAGTTGCCATCAAGAAAATTAATGATGTGTTTGAGCATGTATCTGATGCCATTCGTATCCTCAGAGAAATTAAGCTTCTTCGGATGCTTCATCATCCGAATATTGTAGAGATAAAACATATTATGCTTCCTCCCTCACAACGAGAATTCAAAGATATATATCTTGTTTTTGAGTTGATGAAGTCTGATCTTCACCATGTAATTAAGGCAAATAATGATCTTTCTCCCAAGCAGCATAAGTTTTTTCTCTACCAGCTTCTTAGTGGCCTAAAATATATTCATGCGGCAAATGTCCTTCATCGAGATTTGAAGCCGAAAAACATACTTGCTAATGCTGACTGCAGACTGAAGATATGTGATTTTGGACTTGCTCGTGTATCTTTTAGTGATGCGCCATCTACTATTTTTTGGACAGATTATGTTGCAACTCGATGGTATCGCGCTCCCGAACTCTGTGGATCATTTTTCTCGAGAGTAAGCCACTTTACATCTTCTAGAAATCATGTTCAATTAGAAGTCATATTGAAGGGTGTAGATTTGGAGGGAACTTGGGCAAATCTTTCTAGGTATACCCCTGCGATAGATATATGGAGTATCGGATGCATATTTGCGGAAATGCTTACGGGGAAACCTTTGTTTCCTGGAAAAAATGTGGTTCACCAATTAGATCTAATTACCGATCTGTTTGGCACTCCTGAACCAGAGGCCATAGCGAAGATTCGGAATGAGAAGGCAAGAAGGTACCTTGGAAACATGCGTAAAAAACCACCAGTTCCATTCTCACGAAAGTTTCCTAATGTTGACCCATTGGCACTTTGTTTACTGGAACGTCTCCTGGCATTTGATCCCAAATGTCGTCTCACAGCTGCAGAGGCACTTGCTGATCCTTACTTCAACGGTATGGCGAAACCAGAACTTGAGCCTTCTATTCAACCAATTTCGAAACTTGAGTTTGAGTTTGAGAGGAGGAGGTTATCAAAAGATGATGTTAGAGAGTTGATATATGCGGAGATTTTAGAGTATCATCCCCAGATGCGTCAGGAGTGTCTACGTGATGGAGATCATCAATCTACCTTTATGTATCCAAGTGGCGTCGATCGATTTAAGCTTCAGTTTGCACATCTGGAAGAGCACCATGGTATAGGTGAAAGAAGAAGTCCACTTCAAAGGCAGAACATTTCTTTACCTCGGGAGCGGGTTAGTCCTACTGAGCAGAACAACACTGAGAATAAAACTGATTTTGAAAGGGGGAAAGATAAGAGTTCTTATCTCTTGAAAAGTGCTAGTATTAGTGCATCGAGGTGTGTTGGGGTAACACCAAAGGAGAAGTCTGAGGCGGAAGAAACGAGTACTGAAGTGAAAAATGAAGCAGTGGATGGCTTGTCTCAGAAGATCGCAGTCCTTCAGACTTGA 1764 41.38 MLQFNGGELNQNRGRRPLVLYGLIHIVIELTLICSTMDRLNKAKGAKSLTMFDSGILAFCASFPLFCFSLLLILLQGDKQSEFFTEYGEASRYQIQEVVGKGSYGVVGSAIDTQTGERVAIKKINDVFEHVSDAIRILREIKLLRMLHHPNIVEIKHIMLPPSQREFKDIYLVFELMKSDLHHVIKANNDLSPKQHKFFLYQLLSGLKYIHAANVLHRDLKPKNILANADCRLKICDFGLARVSFSDAPSTIFWTDYVATRWYRAPELCGSFFSRVSHFTSSRNHVQLEVILKGVDLEGTWANLSRYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLITDLFGTPEPEAIAKIRNEKARRYLGNMRKKPPVPFSRKFPNVDPLALCLLERLLAFDPKCRLTAAEALADPYFNGMAKPELEPSIQPISKLEFEFERRRLSKDDVRELIYAEILEYHPQMRQECLRDGDHQSTFMYPSGVDRFKLQFAHLEEHHGIGERRSPLQRQNISLPRERVSPTEQNNTENKTDFERGKDKSSYLLKSASISASRCVGVTPKEKSEAEETSTEVKNEAVDGLSQKIAVLQT 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25731887 25736955 + ClCG04G010720.1 Cla04g01055 271283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g01055 587 Gene3D Transferase(Phosphotransferase) domain 1 303 438 - -
Cla04g01055 587 Gene3D Phosphorylase Kinase; domain 1 439 461 - -
Cla04g01055 587 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 58 275 - -
Cla04g01055 587 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 304 533 - -
Cla04g01055 587 MobiDBLite consensus disorder prediction 557 571 - -
Cla04g01055 587 Gene3D Transferase(Phosphotransferase) domain 1 177 271 - -
Cla04g01055 587 MobiDBLite consensus disorder prediction 504 525 - -
Cla04g01055 587 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 58 275 - -
Cla04g01055 587 CDD STKc_TDY_MAPK 92 460 - -
Cla04g01055 587 ProSitePatterns Protein kinases ATP-binding region signature. 99 123 IPR017441 GO:0005524
Cla04g01055 587 SUPERFAMILY Protein kinase-like (PK-like) 89 422 IPR011009 -
Cla04g01055 587 MobiDBLite consensus disorder prediction 552 572 - -
Cla04g01055 587 Gene3D Phosphorylase Kinase; domain 1 91 176 - -
Cla04g01055 587 SMART serkin_6 93 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla04g01055 587 ProSitePatterns MAP kinase signature. 128 231 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cla04g01055 587 MobiDBLite consensus disorder prediction 497 535 - -
Cla04g01055 587 ProSiteProfiles Protein kinase domain profile. 93 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla04g01055 587 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 304 533 - -
Cla04g01055 587 Pfam Protein kinase domain 93 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla04g01055 Cla06g01427 CCT
Cla04g01055 Cla06g01427 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g01055 Cla-Chr4:25731887 Cla06g00537 Cla-Chr6:6447769 0 dispersed
Cla04g01055 Cla-Chr4:25731887 Cla06g01427 Cla-Chr6:27853411 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80511 PF00069 Pkinase 2.60E-61 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g01055 - - bhj:120082540 905.975