Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla04g01138 | ATGGCGACAAAATCCGAGAAATTTTCTGCGGATTTTGTGATGGGTGGAGTGGCTGCGATTGTAGCCAAAACTGCAGCGGCCCCCATTGAGAGAGTCAAGCTTTTGTTGCAGAATCAGGGAGAGATGATAAAGAGAGGGCATCTTAAGAAACCATATCTGGGCATTCATCACTGTTTCAGAACAGTTTTGAGAGAAGAGGGTCTTTTCTCGCTATGGAGGGGAAATCAGGCTAATGTTATTCGATATTTCCCTACTCAGGCTTTCAACTTTGCGTTCAAAGGTTATTTCAAAACGAAATTTGGGCGCTCGAAAGAGAAAGATGGATACATCAAGTGGTTTGCTGGAAATGTTGCTTCAGGAAGTGCTGCAGGAGCAACTACGTCTTTGTTTCTGTATCATTTGGATTATGCACGAACTCGACTTGGCACCGATGCCAAGGATGTTGGCAGTAACAGTCAGCGCCAGTTTAAAGGGATATTGGATGTCTACAGAAAAACATTGTCGAGTGATGGAATTGTTGGTCTATACCGAGGATTTAGTGTTTCGATCGTGGGAATTACTCTGTACAGGGGCATGTATTTTGGGATTTACGACACTTTGAAGCCTCTTGTTCTGGTTGGACAGTATGAGGGGAACTTTTTTGCTAGTTTCTTATTGGGGTGGAGTATTACAACCTTTTCTGGGGTATGTGCTTATCCTTTCGACACACTGCGACGAAGAATGATGCTTACATCCGGACAAACCCTGAAGTACCGTAGTGGTTTGCATGCCTTTTCTGAGATCATTCGCCATGAGGGCATATCTGCTCTTTTTCGAGGAGTCACAGCCAATATGCTTGTTGGTGTTGCAGGGGCTGGCGTTCTTGCAGGTTATGATCAGTTGCACGAAATCGCATGTAGGCATGGTTATTCCTTTGGAGGGCAGCATCAAATAGCCTCAAAATGA | 945 | 44.55 | MATKSEKFSADFVMGGVAAIVAKTAAAPIERVKLLLQNQGEMIKRGHLKKPYLGIHHCFRTVLREEGLFSLWRGNQANVIRYFPTQAFNFAFKGYFKTKFGRSKEKDGYIKWFAGNVASGSAAGATTSLFLYHLDYARTRLGTDAKDVGSNSQRQFKGILDVYRKTLSSDGIVGLYRGFSVSIVGITLYRGMYFGIYDTLKPLVLVGQYEGNFFASFLLGWSITTFSGVCAYPFDTLRRRMMLTSGQTLKYRSGLHAFSEIIRHEGISALFRGVTANMLVGVAGAGVLAGYDQLHEIACRHGYSFGGQHQIASK | 314 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 26568095 | 26570330 | + | ClCG04G011580.1 | Cla04g01138 | 271366 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla04g01138 | 314 | SUPERFAMILY | Mitochondrial carrier | 6 | 294 | IPR023395 | - | |
Cla04g01138 | 314 | Gene3D | Mitochondrial carrier domain | 2 | 303 | IPR023395 | - | |
Cla04g01138 | 314 | PRINTS | Mitochondrial carrier protein signature | 11 | 24 | IPR002067 | GO:0055085 | |
Cla04g01138 | 314 | PRINTS | Mitochondrial carrier protein signature | 24 | 38 | IPR002067 | GO:0055085 | |
Cla04g01138 | 314 | PRINTS | Mitochondrial carrier protein signature | 74 | 94 | IPR002067 | GO:0055085 | |
Cla04g01138 | 314 | PRINTS | Mitochondrial carrier protein signature | 126 | 144 | IPR002067 | GO:0055085 | |
Cla04g01138 | 314 | PRINTS | Mitochondrial carrier protein signature | 176 | 194 | IPR002067 | GO:0055085 | |
Cla04g01138 | 314 | PRINTS | Mitochondrial carrier protein signature | 220 | 242 | IPR002067 | GO:0055085 | |
Cla04g01138 | 314 | Pfam | Mitochondrial carrier protein | 6 | 102 | IPR018108 | - | |
Cla04g01138 | 314 | Pfam | Mitochondrial carrier protein | 112 | 204 | IPR018108 | - | |
Cla04g01138 | 314 | Pfam | Mitochondrial carrier protein | 212 | 297 | IPR018108 | - | |
Cla04g01138 | 314 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 1 | 308 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cla04g01138 | 314 | PANTHER | ADP,ATP CARRIER PROTEIN ER-ANT1 | 1 | 308 | - | - | |
Cla04g01138 | 314 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 211 | 297 | IPR018108 | - | |
Cla04g01138 | 314 | PRINTS | Adenine nucleotide translocator signature | 8 | 20 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cla04g01138 | 314 | PRINTS | Adenine nucleotide translocator signature | 52 | 73 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cla04g01138 | 314 | PRINTS | Adenine nucleotide translocator signature | 85 | 97 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cla04g01138 | 314 | PRINTS | Adenine nucleotide translocator signature | 111 | 124 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cla04g01138 | 314 | PRINTS | Adenine nucleotide translocator signature | 216 | 232 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cla04g01138 | 314 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 6 | 99 | IPR018108 | - | |
Cla04g01138 | 314 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 111 | 203 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g01138 | Cla-Chr4:26568095 | Cla08g01581 | Cla-Chr8:28491837 | 1.21E-126 | dispersed | |
Cla04g01138 | Cla-Chr4:26568095 | Cla08g01677 | Cla-Chr8:29393289 | 3.24E-28 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla04g01138 | K05863 | - | csv:101207715 | 566.614 |