Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g01144 ATGATTAAAATTAAAGGGGCCAAGGATGTAGAAGCCTTTACTGTGCTAGCAATAATGGAGACAGCGTTTCAACCGAACTCGTCTACAATCACCGATCGTGCTGGCCGTCGCGCCGCCAGGTGTATCGCCGTGCGATTTTCTCTCCGTCTCTCTGTATCTTGCATTCTTTTTTCTCTCAACTCCGCTGATGGTTGGCCGGCTGCCGCACAACACGCTCTCAGTCGTTGGAATCGCCCAGGCGTCGTCGAATCTTTCGCCTTCAGCAGGCAGTTCGCAGTGAGGAGCTTGGGTAGTGCCATGGAAGAAGAGATCGGAGAAGAATTCAAGAGGAGTGGTTTCACGTTCGATGAAGAGGAAGAGATTCTCCAAAAATGTGTTACGTTCTGTGTTAATTACAATCTAAAGCCTTCAGATATTGTTTCTAGCTGGGAGGTCTACTATCTCAACAGGCAATTAGATGGGTCATTGGTGCAAATTGAACAGATGGATGGGTTCTTACAACATTTACAGAATGAGCAAAAAGAAGCAGTCATTAAAGGGGAACCAGATCTTCATGTTTACTCGAGCAAAGATGTGGAAGCGATTTTGAATGATGAGGATGAAGATCTAAATGGAGACATTCTTAAGACTCCAAATGGGAAATCTCAGAGCCTCCACAAAGAGCGATTGGGTTTGACACCTTACACGAATGAAGGCTTGTTCTCCTCGGGAAAGCCTTCAAAGCATGTTACACCCTTTGGCCAAAGAACAGAGAAGTTTGTTGTGAGGCTCAACATTAATAGCATGCCTGATAAGGTGACGGCTGAAAAGGAAGATAATTGCGAGAATGATGAAGATGCAATCATCAAGAAGGTTCGACCCCTGCAAGGATGCTTATTGACAGTCCATGGATCAGGATTTGGACTTGAACCAAATTGCAGGTTCATGTATGACAAGGATGAAGATAGGTTTAATGCTCTTGATAACCGAATCATGAGGCATGCTAAAGCTCTTGCTGCATCTGGGCTCTACGAAGAAGCAGTGGACCCTACAGTTGCTTCACAGAAAAACATGTTTGCAGTGGGCATGATTTATTGTGATGGTGAAGGACACTTGAACGATAAGTCCACCTTGTTGCAAAGCAGTATCACGCATTCAGGGGGGCAGCGAGTTCGTCTAGAATTACAACACTTAAGCCAATTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATTGCGTCCAAACTTGTAGATTCTTTTCCTCTGTCTGCCACTATAGACCCCATTCTGCCTCCAGCAAAGAAGATAGCTTTGAACCATGATATCCAACCAATTAATCAATCCTCTACACCGTCAGAATTATCGATGCTTGGACCATTTGTTGATTCTGAACATTCTGATATCAAGAGAGGAACTGTAGAGATGAGCTTTGAGGAAATTTTCAACTTTGAAGTTTTAAGAAGGGTACAAGATTATGCAGAACACATGGGTCCTGATGCACGTGTACTGTTGATGCCATCTACAAGGGATGCTCATCACGACTTTGTTTTTCCTCAGCCTGCTTTTGACATTCCATCTGATCTCAGACTTCAGATATCCAGTCTCCCAAACCCATGCATTTTGGAAGCAAATCAGGCAACGATAGCCTGCTGCACCATGGATATTCTCAGACACCTTAGTGGAGAAGAGCTGTCAAGAAACCTAACTAAGGGAGCAACCAACGACCGCCTGAGCACACTTGCAAGTCATATACTTCGCCAGCGCAGGCATGTTATATTAGGCACAAGAATCTTTTATCCTCTATACCCTCCAGCCGAAGGAGTTCCACTAGACTTTTCACTTGCCCCAAAAGCTCTTGACATTGCTGTAATACCCGATATTCTCATTCTTCCATCCGACATGAAACACTTCGTGAAGGTCATATCCCTTGGTGAAGGAGGTCCAGAGGAAGAGCAAGCGAGATGCATATGTGTGAATCCTGGAAGATTGGCCAAGGGTGAAGGAGGAGGTACTTTTGTAGAGCTTAATTACTTCGGTAGGCCTGACCAGATAAATGCTTCAGTTGTCAGCATATGA 2085 44.65 MIKIKGAKDVEAFTVLAIMETAFQPNSSTITDRAGRRAARCIAVRFSLRLSVSCILFSLNSADGWPAAAQHALSRWNRPGVVESFAFSRQFAVRSLGSAMEEEIGEEFKRSGFTFDEEEEILQKCVTFCVNYNLKPSDIVSSWEVYYLNRQLDGSLVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVEAILNDEDEDLNGDILKTPNGKSQSLHKERLGLTPYTNEGLFSSGKPSKHVTPFGQRTEKFVVRLNINSMPDKVTAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHAKALAASGLYEEAVDPTVASQKNMFAVGMIYCDGEGHLNDKSTLLQSSITHSGGQRVRLELQHLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSMLGPFVDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQATIACCTMDILRHLSGEELSRNLTKGATNDRLSTLASHILRQRRHVILGTRIFYPLYPPAEGVPLDFSLAPKALDIAVIPDILILPSDMKHFVKVISLGEGGPEEEQARCICVNPGRLAKGEGGGTFVELNYFGRPDQINASVVSI 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26634723 26644827 - ClCG04G011650.2 Cla04g01144 271372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g01144 694 PIRSF DNA_pol_alpha_2 98 440 IPR016722 -
Cla04g01144 694 PIRSF DNA_pol_alpha_2 439 685 IPR016722 -
Cla04g01144 694 Pfam DNA polymerase alpha/epsilon subunit B 445 642 IPR007185 GO:0003677|GO:0006260
Cla04g01144 694 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 456 694 IPR016722 -
Cla04g01144 694 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 100 459 IPR016722 -
Cla04g01144 694 Gene3D - 98 176 IPR043034 -
Cla04g01144 694 Gene3D - 438 576 - -
Cla04g01144 694 Gene3D - 582 691 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g01144 K02321 - csv:101206268 1085.09