Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g01145 ATGTCTTTAGAACAAGAATTTCTGTTCCTTATTCCCTCAACAATGGCCAATAATCTCAATATCTTTCTTTGTTTTCTTCTCTTCGTGGCTATTTTCACCCTTTGCCTCACCCCTGGTGGTCTAGCTTGGGCTCTAATTTCAAAGCCAAGAAACAAACCTACCATTCCTGGCCCTTGTGGGACTCCTATTTTAGGTCAAGTTTCTGCCTTTACCACTTCTTTAACTCATAAAGTCCTTGCTAAGCTTGCTCATACCTTAAATGCCAAATCTTTAATGTCATTCTCAATTGGGTTCACTCGTTTTGTGATTTCTAGCAATCCCATCATAGCCAAAGAGCTTTTGAATAGCTCAGCTTTTGCTGATCGTCCAATTAAGGAATCAGCTTATGAGCTTTTGTTTCATAGAGCAATGGGGTTTGCTCCTTATGGGGAATATTGGAGGAATCTTAGGAGAATTTCAGCCACTCATTTGTTTAGTCCTAAAAGGGTTTGTGGATTTGGGGTTTTGAGGGAGAGAATTGGAGTTAAAATGATGGAGGAAATTAAGGGTTTGATGGAGAAGAATGGGGAAGTTGAAGTTAGGAAAATCTTGCATTTTGGGTCATTGAGTAATGTTATGGGGAGTGTGTTTGGGAAAAGTGTTGAGTTTGGTGATAGTGAGATTGAGGGATTGGTGAGTGAAGGGTATGATTTGCTTGGGAGTTTTAATTGGAGTGATCATTTTCCTCTTTTGGGTTGGTTGGATTTGCAAGGTGTGAGAAAAAGGTGTAAAGTTTTGGTGGGGAAAGTTAATGTTTTTGTTGGAAAAATCATTGAGGAGCATAGAATGAAAAGGAGGGTTGTTAGTAAAGGAAATAATAACCCTAATGATAATGAAGATGGAGATTTTGTTGATGTGTTGCTTGATTTGCAAAAGGAAAACAAACTCACTGACTCTGATATGATTGCTGTGTTATGGGAAATGATCTTCCGAGGAACAGACACCGTGGCAATTCTCCTAGAATGGATTTTAGCAAGAATGGTTCTTCATCCCGATATCCAAGCCAAACTCCAATCCGAAATCGACCGAGTCGTTGCCAAAACCGGCCGAAACATCTCGGATTCAGACCTCCCAAATCTCCCTTATCTCCATGCAGTCGTCAAAGAGACTCTAAGAATGCACCCTCCGGGCCCACTCCTCTCCTGGGCCCGCCTCGCCATTCACGACACCCACGTGGCCGGCCACTTCATTCCCGCCGGCACGACGGCGATGGTTAACATGTGGGCCATAACCCACGACGACCAAATCTGGACCGACCCGACTACATACGACCCGGATCGGTTCATTAAAGATGACGTGGCGATAATGGGGTCGGATTTGCGGCTCGCGCCTTTCGGGTCCGGAAGAAGGGTTTGTCCTGGTAAAGCCATGGGGCTAGCCACGGTCGAGCTTTGGCTCGCTCAGTTGGTTCATAGGTTCGAATGGGTTGAGGCTGGTGGCTGGGAAAATGGAGGAGTTGATCTGTCTGAGTGTTTGAAGCTGTCTCTGGAGATGAAACACCCTTTGATTTGTAGGGCTGTTCCTAGGATTGTGGGGCTTGAGTCTCACCCATGA 1593 44.76 MSLEQEFLFLIPSTMANNLNIFLCFLLFVAIFTLCLTPGGLAWALISKPRNKPTIPGPCGTPILGQVSAFTTSLTHKVLAKLAHTLNAKSLMSFSIGFTRFVISSNPIIAKELLNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISATHLFSPKRVCGFGVLRERIGVKMMEEIKGLMEKNGEVEVRKILHFGSLSNVMGSVFGKSVEFGDSEIEGLVSEGYDLLGSFNWSDHFPLLGWLDLQGVRKRCKVLVGKVNVFVGKIIEEHRMKRRVVSKGNNNPNDNEDGDFVDVLLDLQKENKLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKLQSEIDRVVAKTGRNISDSDLPNLPYLHAVVKETLRMHPPGPLLSWARLAIHDTHVAGHFIPAGTTAMVNMWAITHDDQIWTDPTTYDPDRFIKDDVAIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAQLVHRFEWVEAGGWENGGVDLSECLKLSLEMKHPLICRAVPRIVGLESHP 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26653420 26655441 - ClCG04G011660.1 Cla04g01145 271373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g01145 530 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 522 - -
Cla04g01145 530 Pfam Cytochrome P450 56 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g01145 530 Gene3D Cytochrome P450 44 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g01145 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Cla04g01145 530 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g01145 530 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g01145 530 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g01145 530 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g01145 530 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g01145 530 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g01145 530 PANTHER CYTOCHROME P450 78A7-RELATED 5 522 - -
Cla04g01145 530 SUPERFAMILY Cytochrome P450 55 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g01145 530 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g01145 530 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g01145 530 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla04g01145 530 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g01145 Cla-Chr4:26653420 Cla08g01050 Cla-Chr8:23178388 0 dispersed
Cla04g01145 Cla-Chr4:26653420 Cla01g01960 Cla-Chr1:34243021 3.73E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g01145 K20619 - csv:101203458 948.347