Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla04g01181 | ATGGCGCTGTTTAGAAAATTATTCTACCGGAAGCCTCCAGATCGGCTTCTCGAGATCGCGGAGAGAGTGTACGTGTTTGATTGTTGCTTCTCTACCGAGGTGTTGGAGGAGGATGAGTACAGAGTGTACTTGGGTAGCATTATACCAAAGCTGCAAGACCACTTTCCGGATGCATCTTTCATGGTGTTTAACTTTAGTGAACGAAAGAGGAAGACTAAAACTTCGGATATCCTGTCTCAATATGGTATGACAGTGATGGAATATCCTCTTCAATATGAAGGGTGTTCACTACTGCCATTGGAGATGATCCACCACTTCATTCGGTCGAGTGAAAGTTGGTTGTCATTGGAGAGACAGAAAAATGTATTGTTGATGAACTGTGAACGAGGCGGATGGCCAATCCTTGCTTTCATGCTTTCAGGTCTTTTATTGTACCGTAAACAATATGAGGGGGAGCAGAAGACCCTTGAAATGGTCTATAGGCAAGCTCCTAGAGAACTTTTCCGTGTCCTATCTCCTGTTAACTCACAGCCTTCTCAAATGAGATACCTTCAGTATATTTCTAGGAGAAATTTAGGTTCTGATTGGCCTCCACCTGATACACCCCTAATTTTAGACTGTCTGATACTTCGAGAGCTTCCTATGCTTGGTGGAGGAAAAGGGTGGAGGCCTATCATACGCATTTACAGTCAGGACCCATTAACACCACGAAATAGAAGCCCAAAACTTGTCTTCTCGAGCGCAAAGAAGGAAAGACATGGTTGCCAGTATCTACAGGCAGCAAGCAGATTAGTAAAAGTGGATGTCCATTGTCACATTCAAGGTGATGTTGTTCTTGAATGCATCCGTTTAGATGGAGATCTAATACATGAGGAAGTGATGTTTAGAATTATGTTTCACACCGCATTTGTGCATTCAAACAGTTTGAAGCTCAATTGTGACGAGGTTGATGTTTTATGGGATGCCAAGGAGCAGTTTTCTAAAGATTTTAGAGCAGAGGTACTTTTTCTGGATGCTAATCATGTTGTGCCAAACAACCGTCCCTTGACCAGAAGTGATGATAAAATTGAGATTGAAAGCAATTCAACTGAGGAATTTTTTGAAGTGGAAGAAATATTTAGCAATATTGTTGACGTGCAGGAAGTTAAGAGGGATTATGATGTTCAAGCAGTACATGCTAACGAAACAGATTATATTGACCATCAACCAGTTTGGAAGGAGGATGCAGATCCTCCTACATTCCAACGCTGTAAATCATTTGGAGGGAGTCAAAACTTGGACAAGAAGATAGATTGTAACGTTGAAGCAGTGAAGGACATTACTGTTGATGATGTAACTTTCAAGACAGCTGAAAAAGTGGACTCTGGTCTTCAAGTAGTGAAGGACATTGTTGTGGATTATGGAGATAAGAAGCCAAATCCTCTGCTATTTTCTGTTAATGTACTGAGACGTATGGCAATCAAGGAACTGATTGATGATGCTTATGACAAGTTGGAAGGGGTGCAGCATAAAGGGTACGGAGAAGATACTGCCATTCCACACTTTGAATCAAAGGTTCCTTCGAAAAAGTTGGAAGCTGATGCGTGGAGGCTTAAATTTGAGAAGTTGCAATCAACGTCAAGGAAACAGCCGTCATCAACAATTAAGCCAATAAATCATGCAATTGTAGCTAAACAGAAAACCGAACAGCCAGAAGATCAGTTTCTTGTAAAACAGGCCAAACCAAATACTCTTTCTAGATTGATTTCACATGACAAAGAACCTTACACAAACTCCATGCATTTGTTTTATCCACCATCAAGGCATACTGGTGACTCAGCAACAGCTATTAGTTCTCCTACTAAAGATTTTTATTCATATTCAACTTTAAAATCTGCTTCTGCTTCTGCTACTTCAGGACTGCTGCTGTCTGATACAGCTGATGAACAAAAAAGTGACAAGGTGAGTCCTAAGAAACCTTTATGTTCTGCAACAGAGATTCTCAAGAGTAAACCACAATCACCACTTGACTCCTCAAGACCATTGCCAAACGCTGTTCACTATCAAGATCCTACTCTTCCTCTATCTGCTACTACACTTCTACAGCCACCAGCTCTTCAGGCCAACACATCTTTCTTGCATGCATCATCTCCTAAATCTTCTTTGTCTCCCTCTACACATTATCACAAAAATGCAAGATCTCCTCCTCCAGCTCCGCCTCCACCACCACCTCCTCCACCTAAAAGTTCATCATTAGTGTGTGGAAATACACTTAAGCATAGTGCTCCACCAGCACCACCTCCACCTCCCATACGTAGAGCTCAACCACAATTACCTCCCCCACGACCACCCTCATCACATGGAGCTCTGCTTTCTCCATGCCTATCAAATGCTGGAGCTTTTCCACCACCCCCTCCGCCACCTCCTCCAATTCAGAGGAGAGCTCCTCCACATTTAACCCAGGGGCAACAGGCTTTAACATCTGCAACAGCCTGTGTTGTCTCATCTTCCCTGCCATCTCCAATTTGTGAAGCACCATCACCTGCTCAACCTACAACTGGTCCCCTTCCCCCGGTTCCTTCTTCTTCTTCTAAACCTTCAGGAGGTATGACTCCACACCTGGGAGCTAAAGGAGTAAGTTCTTCAACTGATGTGAAAACATCATCTATAGTGAGGGGACGTGGGTTCTCGCGGTCAATTGGGATGGGGGTGGCTACTACAGGGCTTCAACGATCATCATTGAAACCTCTGCATTGGAGCAAGGTGACTCGGGTACTACAAGGGAGCTTATGGGAAGAATTGCAAAGATGCGGAGATTCTGAAAGTGCACCAGAATTTGATGTATCTGAGCTGGAGACGCTTTTCTCTGTGATTGTCCCTAAACCTATTGTTGATTCCGGAGGTAAATCTGGAGGACGAAGGAAGTCAGTTGGATCAAAATTGGACAAAGTTCACTTGATTGATCTTAGGAGGGCAAATAACACTGAAATCATGCTAACAAAAGTTAGGATGCCACTATCTGATATGATGGCAGCAGTACTCTCCATGGATGAGTCAGTACTAGATGTAGATCAAGTGGAAAATCTTATCAAATTTTGCCCCACCAAAGAGGAGATGGAGCTTCTCAAGGGATACTCTGGTGACAAGGATAAACTTGGCAAGTGCGAACAGTACTTTTTGGAGATGATGCAAGTTCCTCGTGTGGAGTCAAAGTTAAGAGTGTTTTCTTTCAAGATTCACTTCAGCTCTCAGGTTTTGTGGTATCTGCAACTCTTCATTTATAACCTATTTTTAATAGCAGAGTTCAAAAAAAGCCTAAACACTGTAAACTCTGTCTGTCAAGAGGTGAAGAATTCTCGCAAATTGAAGGAGATAATGAAGAGAATTCTTTGCCTGGGAAATATGCTGAACCAAGGAACAGCTAGGGGTTCGGCAATTGGATTCAGGTTGGATAGCCTCTCAAAACTCACTGATACACGTGCTTCTAACAATAAGTTGACTCTCATGCATTATCTGTGTAAGGTCCTTGCTTCGAAGTCACCATCACTTCTTGATTTTCATCTGGACCTTGGTAGCTTAGAAGCTGCGTCTAAGATACAATTGAAATCTTTGGCAGAAGAAATGCAGGCAATAACAAAAGGATTGGAAAAGGTGAAGCAGGAACTGGTTGCATCTGAAAGCGATGGCCCCATCTCTGAAACTTTTCATAAGATATTGGAAGGATTTGTTACTCTTGCCGAGATGGAGGTGGAATCTGTGACAGTTCTTTACTCAGTGGCGGGTAGAAATGCTGATGCACTTGCACTATATTTTGGCGAGGATCCTGCCCGTTGTCCATTTGAACAAGTTACAGGAACCCTCTTCCATTTTACAAGGTCCTTTTTGAAAGCACATGAAGAGAACTGCAAGCAGTTAGAAATGGAGATGAGAAAGATGAGAAAATAG | 3924 | 42.69 | MALFRKLFYRKPPDRLLEIAERVYVFDCCFSTEVLEEDEYRVYLGSIIPKLQDHFPDASFMVFNFSERKRKTKTSDILSQYGMTVMEYPLQYEGCSLLPLEMIHHFIRSSESWLSLERQKNVLLMNCERGGWPILAFMLSGLLLYRKQYEGEQKTLEMVYRQAPRELFRVLSPVNSQPSQMRYLQYISRRNLGSDWPPPDTPLILDCLILRELPMLGGGKGWRPIIRIYSQDPLTPRNRSPKLVFSSAKKERHGCQYLQAASRLVKVDVHCHIQGDVVLECIRLDGDLIHEEVMFRIMFHTAFVHSNSLKLNCDEVDVLWDAKEQFSKDFRAEVLFLDANHVVPNNRPLTRSDDKIEIESNSTEEFFEVEEIFSNIVDVQEVKRDYDVQAVHANETDYIDHQPVWKEDADPPTFQRCKSFGGSQNLDKKIDCNVEAVKDITVDDVTFKTAEKVDSGLQVVKDIVVDYGDKKPNPLLFSVNVLRRMAIKELIDDAYDKLEGVQHKGYGEDTAIPHFESKVPSKKLEADAWRLKFEKLQSTSRKQPSSTIKPINHAIVAKQKTEQPEDQFLVKQAKPNTLSRLISHDKEPYTNSMHLFYPPSRHTGDSATAISSPTKDFYSYSTLKSASASATSGLLLSDTADEQKSDKVSPKKPLCSATEILKSKPQSPLDSSRPLPNAVHYQDPTLPLSATTLLQPPALQANTSFLHASSPKSSLSPSTHYHKNARSPPPAPPPPPPPPPKSSSLVCGNTLKHSAPPAPPPPPIRRAQPQLPPPRPPSSHGALLSPCLSNAGAFPPPPPPPPPIQRRAPPHLTQGQQALTSATACVVSSSLPSPICEAPSPAQPTTGPLPPVPSSSSKPSGGMTPHLGAKGVSSSTDVKTSSIVRGRGFSRSIGMGVATTGLQRSSLKPLHWSKVTRVLQGSLWEELQRCGDSESAPEFDVSELETLFSVIVPKPIVDSGGKSGGRRKSVGSKLDKVHLIDLRRANNTEIMLTKVRMPLSDMMAAVLSMDESVLDVDQVENLIKFCPTKEEMELLKGYSGDKDKLGKCEQYFLEMMQVPRVESKLRVFSFKIHFSSQVLWYLQLFIYNLFLIAEFKKSLNTVNSVCQEVKNSRKLKEIMKRILCLGNMLNQGTARGSAIGFRLDSLSKLTDTRASNNKLTLMHYLCKVLASKSPSLLDFHLDLGSLEAASKIQLKSLAEEMQAITKGLEKVKQELVASESDGPISETFHKILEGFVTLAEMEVESVTVLYSVAGRNADALALYFGEDPARCPFEQVTGTLFHFTRSFLKAHEENCKQLEMEMRKMRK | 1307 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 26995366 | 27006299 | + | ClCG04G012060.2 | Cla04g01181 | 271409 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla04g01181 | 1307 | Gene3D | Formin, FH2 domain | 899 | 1298 | IPR042201 | - | |
Cla04g01181 | 1307 | MobiDBLite | consensus disorder prediction | 707 | 723 | - | - | |
Cla04g01181 | 1307 | SMART | it6_source | 897 | 1306 | IPR015425 | - | |
Cla04g01181 | 1307 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
Cla04g01181 | 1307 | MobiDBLite | consensus disorder prediction | 754 | 780 | - | - | |
Cla04g01181 | 1307 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 14 | 188 | IPR029021 | - | |
Cla04g01181 | 1307 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 204 | IPR029021 | - | |
Cla04g01181 | 1307 | MobiDBLite | consensus disorder prediction | 836 | 883 | - | - | |
Cla04g01181 | 1307 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 897 | 1307 | IPR015425 | - | |
Cla04g01181 | 1307 | Pfam | Formin Homology 2 Domain | 905 | 1287 | IPR015425 | - | |
Cla04g01181 | 1307 | MobiDBLite | consensus disorder prediction | 791 | 808 | - | - | |
Cla04g01181 | 1307 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 795 | 1307 | - | - | |
Cla04g01181 | 1307 | MobiDBLite | consensus disorder prediction | 869 | 883 | - | - | |
Cla04g01181 | 1307 | SMART | PTEN_C2_2 | 198 | 338 | IPR014020 | - | |
Cla04g01181 | 1307 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 200 | 336 | IPR035892 | - | |
Cla04g01181 | 1307 | MobiDBLite | consensus disorder prediction | 707 | 824 | - | - | |
Cla04g01181 | 1307 | MobiDBLite | consensus disorder prediction | 640 | 683 | - | - | |
Cla04g01181 | 1307 | Coils | Coil | 1194 | 1214 | - | - | |
Cla04g01181 | 1307 | MobiDBLite | consensus disorder prediction | 726 | 743 | - | - | |
Cla04g01181 | 1307 | PANTHER | FORMIN-J | 1 | 1305 | - | - | |
Cla04g01181 | 1307 | Pfam | C2 domain of PTEN tumour-suppressor protein | 199 | 336 | IPR014020 | - | |
Cla04g01181 | 1307 | Coils | Coil | 1288 | 1307 | - | - | |
Cla04g01181 | 1307 | Gene3D | - | 205 | 336 | - | - | |
Cla04g01181 | 1307 | MobiDBLite | consensus disorder prediction | 837 | 855 | - | - | |
Cla04g01181 | 1307 | MobiDBLite | consensus disorder prediction | 810 | 824 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla04g01181 | Cla06g01570 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g01181 | Cla-Chr4:26995366 | Cla06g01227 | Cla-Chr6:25525775 | 2.39E-148 | dispersed | |
Cla04g01181 | Cla-Chr4:26995366 | Cla06g01570 | Cla-Chr6:29256796 | 4.92E-159 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla04g01181 | - | - | bhj:120083459 | 2188.3 |