Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla04g01186 ATGAACCGTACATTCAATTCATACCCAGATGAAAATTATGCAAATGTTAGGAGATTGATGAGGCAGACTGAGGATGATGATCACAAGAACCTATCGGACAAGGATTCTCACTGTGATTTGAAGAGCAACCACGAATTGAAATGTGGGTTCAGTTCGATTCGAGTAATGGGTATGTTTGTGGTTTTGATGATGTTCATTTCTGTGATATTTTCGGTCTCTGTGGTTCTTAGAGATCCACCATCGGATGCTGTAATTGAAGGTTCAGATGTGTGGATTCCTCAGTGGAACTCTGACCCAGGTACTGGATTCTTGAACTTCTTGGAAATTAGTATGTGCTTTTTGACACTATCTTCAAGCTCTGTGTATGAGACATTGCGTTTAGATTCTAAGGTTGGAGATCTTCCTACGGTTATACAGCCAGTTGATAAACTGCTTAGTGGCCTTCTTTCTGCCAAACATGGGGTTGATTCTTGTCTCAGTAGGTACAATTCAGTTGCTTATCAACACAAGCTGGCTTACGAACCCTCTTCTTACTTAATCTCCAAATTGCGGAGTTATGAAGATCTTCATAAGCGTTGTGGAGTTCATACTGAATCTTACAACAAAACTTTGGAGCAGCTAAAGTCTAACGGCAGTAGCAGCTCCTCAGATTGTAGATATGTTGTTTGGATTTCCTTCAGTGGATTAGGGAATAGAATACTAACCCTCGCTTCGACGTTTCTTTATGCTCTCCTCACAAATCGTGTTCTTCTTGTTGACCCTGGAACTGACATGGCTGATCTCTTCTGTGAACCATTTCCTGAGGTTTCCTGGTTTCTTCCCCAAGATTTCCCATTAAAAGATGAGTTCAGCAAATTCAACCAGAACTCTACTAATTGCTATGGGAAAATAATGAAGAATAGCATGACCCCAGATTCAAGTGGAATGATCTTGCCAGCTGTAGTTTATCTTCATTTGGTCCATGATTATGATGCTGATGATAAGCTTTTCTTCTGTGATCAAGACCAAGCTCTTCTGCAGCAATCTCCTTGGCTTGTTATGAAAACAGACAACTATTTTGTCCCATCTCTCTTTTTGATCCCATCATTTGAGAAAGAACTTAATGATCTTTTCCCAAATAAAGATACAGTTTTCCACTTCTTGGGTCGATATCTGTTTCACCCCGTGAATTCGGTTTGGGGTCTGATTACAAGATATTATCAGGCTTACTTGGCTAGAGCTAGCGAAAGAATAGGCATTCAGATTAGAGTGTTTGATACAGGGACTGGACCTTTTCAACACATCCTGGATCAGGTTCTGGACTGTACCCTGAAGGAGAATCTGTTGCCACAAACCGAGAGGCAAACGAATGTTGTTGCTCCAGCTAGTAATCAAAAGGCAAAGGCTGTGTTGATAACTTCCTTGAGCGCTGGTTACTTCGAGAAGTTGAGAGATATTTACTGGGAGAATCCGACGGTAACGGGAGAGAGAATTAGTTTCTTCCAACCAAGTCATGAGGAACACCAGCAAACGGAGAAAAGTATACATAACCAGAAGGCATTGGCAGAGATGTATTTGTTAAGTACAACTGATGTATTGGTCACCAGTTCATGGTCGACCTTCGGATACGTGGCTCAGGGTCTTGGGGGTCTGAAACCATGGATATTATACAAACCTGAAAATCGTACTGCGCCCGATCCACCTTGCCGTCGAGCCATGTCCATGGAGCCCTGTTTCCATGCACCTCCTTTCTATGACTGCAAGGCTAAGAAAGGAGTGGACACTGGTAAACTTGTTCCTCATGTGAGGCATTGCGAGGACATGGCCTGGGGACTCAAGTTGGTTGATCAATATGATTGA 1839 42.36 MNRTFNSYPDENYANVRRLMRQTEDDDHKNLSDKDSHCDLKSNHELKCGFSSIRVMGMFVVLMMFISVIFSVSVVLRDPPSDAVIEGSDVWIPQWNSDPGTGFLNFLEISMCFLTLSSSSVYETLRLDSKVGDLPTVIQPVDKLLSGLLSAKHGVDSCLSRYNSVAYQHKLAYEPSSYLISKLRSYEDLHKRCGVHTESYNKTLEQLKSNGSSSSSDCRYVVWISFSGLGNRILTLASTFLYALLTNRVLLVDPGTDMADLFCEPFPEVSWFLPQDFPLKDEFSKFNQNSTNCYGKIMKNSMTPDSSGMILPAVVYLHLVHDYDADDKLFFCDQDQALLQQSPWLVMKTDNYFVPSLFLIPSFEKELNDLFPNKDTVFHFLGRYLFHPVNSVWGLITRYYQAYLARASERIGIQIRVFDTGTGPFQHILDQVLDCTLKENLLPQTERQTNVVAPASNQKAKAVLITSLSAGYFEKLRDIYWENPTVTGERISFFQPSHEEHQQTEKSIHNQKALAEMYLLSTTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCKAKKGVDTGKLVPHVRHCEDMAWGLKLVDQYD 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27032300 27035174 + ClCG04G012120.2 Cla04g01186 271414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla04g01186 612 Pfam Xyloglucan fucosyltransferase 137 581 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cla04g01186 612 PANTHER FUCOSYLTRANSFERASE 2-RELATED 139 610 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cla04g01186 612 PANTHER FUCOSYLTRANSFERASE 2-RELATED 20 86 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cla04g01186 612 Gene3D - 395 559 - -
Cla04g01186 612 Gene3D - 215 268 - -
Cla04g01186 612 PANTHER 2-ALPHA-L-FUCOSYLTRANSFERASE, PUTATIVE-RELATED 139 610 - -
Cla04g01186 612 PANTHER 2-ALPHA-L-FUCOSYLTRANSFERASE, PUTATIVE-RELATED 20 86 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g01186 Cla-Chr4:27032300 Cla07g01024 Cla-Chr7:26648898 2.53E-173 dispersed
Cla04g01186 Cla-Chr4:27032300 Cla05g02423 Cla-Chr5:35747848 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla04g01186 K13681 - csv:101219153 1098.19