Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla05g00149 | ATGATTCCCCGGAATCCTCCATTGCTGGGGTTTTCCGATGAGGTCAATGCCCTTAAAACCTCTGATTTGCTTTCCTTAGTTCCTCCTCTTTCCCTCTCTGAATCGATCGAAGAAGAAGAAATGTCAGTTTACGACGCTGCATTTGTGAACACGGAGCTCTCTAAACCCACCTCGATTTTCGGCCTTCGTCTCTGGGTTGTTATCGGAATCTTTGTCGGAGCTCTAATAGTTCTCGCACTGTTTCTTCTTTCACTCTGCCTGACTTCTCGCAAGCGGAACCGCCATAAGAACCAAATCCGTTTTCCTAAGTCCACAACCCACCATTCTCCTCCTGCTGTTTCCAAAGAGATCCAGGAGATCGTCCACCACGCCGTGCCGGATCATCATCACCATGTTCAGCCGGAAATTCATGTCGAGATCGGGAAATTGGAGCATCGGGTTGTTTTCTCTGATAGACCTTCTAGTGGTGAGAGTAGAGGCACTGTGAGTGAAACTGCTTCTTTTGGATCTGGTACTGTTGGGCCTGAGGTTTCACACCTCGGTTGGGGCAGATGGTATACTCTCAGAGAGCTCGAGGCGGCCACTAATGGCTTGTGTGAAGAGAATGTGATTGGAGAAGGTGGATATGGGATCGTATATTTAGGCATTTTAGGAGATGGTACCAGAATTGCTATCAAGAATCTCTTGAATAACAGGGGTCAAGCTGAGAGGGAATTCAAAGTGGAAGTAGAAGCAATTGGACGCGTAAGACACAAGAATCTTGTCAGAATGCTTGTTTATGAGTACGTTAACAATGGCAATTTAGACCAATGGCTTCATGGCGATGTTGGGGATGTGAGCCCTTTGACGTGGGAGATTCGTGTTAACATCATACTTGGCACAGCAAAGGGATTAGCCTATCTTCATGAGGGTCTTGAACCAAAGGTTGTTCATCGTGATGTAAAATCAAGCAACATACTGCTTGATCGTCAGTGGAATGCTAAAGTATCTGATTTTGGGCTGGCCAAGCTTCTTTGTTCTGAAAGAAGCTATGTGACAACTCGTGTAATGGGCACATTTGGCTATGTTGCACCTGAGTACGCCTGCACTGGAATGTTGAATGAAAAGAGTGATGTTTATAGCTTTGGAATTCTGATTATGGAGATAATTTCCGGGCGGAGCCCTGTTGATTACAGTAGACCTCAAGGAGAGGTAAATTTGGTGGATTGGTTGAAAGCAATGGTTGGTGACAGAAAATCTGAGGAAGTGGTCGACCCCAAGTTGCCGGAGAAGCCTCCTTCCAAAGCTCTCAAACGTGTTTTGCTGGTTGCTCTTCGTTGTGTCGATCCTGATGCTACAAAGAGGCCGAAAATGGGACACGTCATTCACATGCTCGAGGCAGATAATTTGCTGTCTCATGATGAACACCGGGTTGGTAAGGACTCTTCTCATTCAATTCAAGGCCATCAACATGAGAACCGGGCCGTTCCAAGACGAGTTAACAATCAGAAAGATGAACAGGCATCTTCTAATGTATGTGAAGGTGACAGTGATGGAAACATTCACCAACCAACTGTGCAGCGTCTGCTCAGCTTCCTTAAAATGCTAGCTGCTTTCTGTCCTGATATTGACTTAACAAAACCATTGTCTATAATTACCTTTCAGGCAAGTTTGGTAGAGACATCTCCAACTGTAACCTCTACTTCATGTGCTCTTTTGCTCTGTTCTGACTGGACCAGTAAGGCTAAGATGTGGACTAGAACTGAGGCATTCGCCTACGAAACCACGACGGGATTTTGTCTGATCTTCACGTTAGGCTGCCCGAAGTCTCATCCTAAGCTGGCTGTGGATGCTTCCAAAAGGATCAGATCAATCCTTTGGTTTATCTGCAACCATACATTGTCTTTTCGAGGACTCTCTGTCAAACTCAAAGCCTTTGGGAGTTTCTTCAAAACCCCCTTATCCAAAGCTTGCTTTTAG | 1959 | 45.58 | MIPRNPPLLGFSDEVNALKTSDLLSLVPPLSLSESIEEEEMSVYDAAFVNTELSKPTSIFGLRLWVVIGIFVGALIVLALFLLSLCLTSRKRNRHKNQIRFPKSTTHHSPPAVSKEIQEIVHHAVPDHHHHVQPEIHVEIGKLEHRVVFSDRPSSGESRGTVSETASFGSGTVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYLGILGDGTRIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRMLVYEYVNNGNLDQWLHGDVGDVSPLTWEIRVNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIISGRSPVDYSRPQGEVNLVDWLKAMVGDRKSEEVVDPKLPEKPPSKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADNLLSHDEHRVGKDSSHSIQGHQHENRAVPRRVNNQKDEQASSNVCEGDSDGNIHQPTVQRLLSFLKMLAAFCPDIDLTKPLSIITFQASLVETSPTVTSTSCALLLCSDWTSKAKMWTRTEAFAYETTTGFCLIFTLGCPKSHPKLAVDASKRIRSILWFICNHTLSFRGLSVKLKAFGSFFKTPLSKACF | 652 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1397457 | 1402215 | + | ClCG05G001340.2 | Cla05g00149 | 271639 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla05g00149 | 652 | ProSitePatterns | Protein kinases ATP-binding region signature. | 204 | 226 | IPR017441 | GO:0005524 | |
Cla05g00149 | 652 | Pfam | Protein kinase domain | 201 | 456 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla05g00149 | 652 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 42 | 475 | - | - | |
Cla05g00149 | 652 | MobiDBLite | consensus disorder prediction | 495 | 510 | - | - | |
Cla05g00149 | 652 | MobiDBLite | consensus disorder prediction | 151 | 170 | - | - | |
Cla05g00149 | 652 | SUPERFAMILY | Protein kinase-like (PK-like) | 177 | 459 | IPR011009 | - | |
Cla05g00149 | 652 | SMART | serkin_6 | 198 | 458 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla05g00149 | 652 | CDD | STKc_IRAK | 204 | 459 | - | - | |
Cla05g00149 | 652 | MobiDBLite | consensus disorder prediction | 469 | 510 | - | - | |
Cla05g00149 | 652 | ProSiteProfiles | Protein kinase domain profile. | 198 | 464 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla05g00149 | 652 | Gene3D | Phosphorylase Kinase; domain 1 | 174 | 265 | - | - | |
Cla05g00149 | 652 | MobiDBLite | consensus disorder prediction | 469 | 494 | - | - | |
Cla05g00149 | 652 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 309 | 321 | IPR008271 | GO:0004672|GO:0006468 | |
Cla05g00149 | 652 | PANTHER | OS01G0323000 PROTEIN | 42 | 475 | - | - | |
Cla05g00149 | 652 | Gene3D | Transferase(Phosphotransferase) domain 1 | 266 | 476 | - | - | |
Cla05g00149 | 652 | MobiDBLite | consensus disorder prediction | 154 | 170 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01655 | Cla-Chr1:31407762 | Cla05g00149 | Cla-Chr5:1397457 | 0 | dispersed | |
Cla02g00525 | Cla-Chr2:5408472 | Cla05g00149 | Cla-Chr5:1397457 | 2.65E-167 | dispersed | |
Cla05g00149 | Cla-Chr5:1397457 | Cla08g01583 | Cla-Chr8:28504183 | 9.56E-177 | dispersed | |
Cla05g00149 | Cla-Chr5:1397457 | Cla05g00913 | Cla-Chr5:9057775 | 1.46E-78 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80525 | PF00069 | Pkinase | 6.40E-37 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla05g00149 | - | - | csv:101219288 | 886.715 |