Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g00156 ATGGCATCAAGTTTGGGAGGGGCATCGATGTCACAAACAGATGATTTCGAGACGTTCACTCCAACGACTGATGTTGAGCCGCTAAAGAGGGCCTGGTGTAATGAGAAGGCTGCTCCTGAGATTCTACCCTTTGAGGGATCTTTGGTTGGGAGAATCAAAGAGCAGATTCAGTCAATGGAAGAGACTATAGAGGAATATTCAAGAAGTGGTATCGATCCCCTAATTGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTGTTGAGATCGTATGTTAGGAGTCGTTTGCAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCCAAAGAAGAGATAACGTTTACTGATAGGTGTCGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGACACATTTGTGGTCTGCAAAAGTAAGGAATATCTTGAACATATCCAGCTTGAGGATGAGGAAGAGAGGGCATCCAGTAGAATAGAGGAACCTTTTGAGATGGAGGCCAATGTATTGCACATTATTCGCTACAGGCCCATAAAATCACTTGTAGAGAGCGGCAGAATTGATTTGCTGTAG 690 41.16 MASSLGGASMSQTDDFETFTPTTDVEPLKRAWCNEKAAPEILPFEGSLVGRIKEQIQSMEETIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYVRSRLQKIEKYMLYILKSDELFRRLSKEEITFTDRCRHDMKKHFDESVLSKLPNNYQDILRQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1442006 1447698 - ClCG05G001400.1 Cla05g00156 271646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g00156 229 Coils Coil 49 69 - -
Cla05g00156 229 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 229 IPR031633 -
Cla05g00156 229 SUPERFAMILY GINS helical bundle-like 20 154 IPR036224 -
Cla05g00156 229 MobiDBLite consensus disorder prediction 1 20 - -
Cla05g00156 229 PIRSF GINS_Sld5 1 229 IPR008591 GO:0006261
Cla05g00156 229 PANTHER SLD5 PROTEIN 9 229 IPR008591 GO:0006261
Cla05g00156 229 Gene3D - 10 219 - -
Cla05g00156 229 MobiDBLite consensus disorder prediction 1 21 - -
Cla05g00156 229 Pfam GINS complex protein 65 123 IPR021151 -
Cla05g00156 229 SUPERFAMILY PriA/YqbF domain 170 229 - -
Cla05g00156 229 CDD GINS_A_Sld5 24 142 IPR038749 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g00156 K10735 - csv:101210888 428.713