Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g00218 ATGGAACTTCTGTCACGCCCCATTTCAGTTGCAGTTGTATTGCTTCTGATTTCCATTGTTGTAAGGCAAATTCTAGCTGGAAAGCTGAGGAAGAAGAAGTATCATCCAATTGCAGGCACTGTATTTCACCAGCTCCTCAATTTCCACCGGTTGCAAGATTACATGACTGATCTTGCTCGAAAGCATAAAACATACAGGCTTCTTGGGCCCTTCAGGAATGAGGTTTATACTTCTGACCCACCAAATGTTGAGTATATACTCAGAACCAACTTCGAGAATTTTGGCAAGGGGTCACATAACTACAGAATTCTCAGGGATCTTCTTGGCGATGGAATTTTCACAGTTGATGGAGAGAAGTGGCGTCAGCAGAGAAAGATTTCAAGCTATGAGTTCTCTACAAAAGTTCTGAGGGACTACAGTAGTGTCATCTTCCGGAAAACTGCTGTTAAACTAGCTAACATCGTGTCCGAAGCTGCTATTTCGAATCGAATAATTGATATTCAAGATCTGTTTATGAAAACAACTCTGGATTCAATATTTCATGTTTCATTTGGAATTGATCTAGATAGCTTGCATGGATCAAATGAAGAAATGAACAAGTTTTGCTCTGCTTTTGAAGCATCAAGTACAATGACACTCTGGCGATACGTTGATGTAATCTGGCCAATCAAGAAGGCTCTGAACATTGGGTCCGAAGCTATCTTAAAAGAGAACATGAAAATTGTTGATGAGTACATATATAAGCTCATTAGTAGCGCACTCGAACAGAGAGAAAAGTTAGGCGACAATGCTTTGGTAGATGAATTTATGAAAAGAGAGAATATAGTGTCGAGGTTTCTGCAAGCGGAAACGTCCGATCCAAAGTATCTAAGAGATATTATTCTTAATTTTGTAATAGCTGGAAAAGACACAACGGCAGTTACCCTTGCTTGGTTCATTTACATGCTTTGCAAGCATCCTGCAGTGCAGGAAAGAGTTGCTAGAGAGATCAAGGAAGTGACAAACGTTGAAGATGTTACCAATTTTGCGGAGTTTGCTGCAAGATTGACTGAAGAATCTCTAGAGAAGATGCAGTTTCTTACTGCAGCTATCAATGAAACGCTTAGACTCTATCCTGCTGTTCCAGTGGATGCAAAGATTTGCTTTTCCGACGATACACTTCCGGATGGATTCAGTGTGAGGAAAGGAGATATGGTGTCGTACCAGCCATATGCAATGGGTAGGATGAAATTCATATGGGGTGATGATGCCGAGGAATTCCGACCAGAGAGATGGTTTGATGGAGATGGAAATCCCCAGCCTCAGAGCCCTTTCAAATTTACAGCCTTTCAGGCAGGGCCACGAATTTGTCTGGGAAAAGAGTTTGCTTACAGGCAGATAAAAATCATCTCAGCTCTATTATTGAGCTGTTTTAAATTCAAAATGAGTGATGAGAAGAAAATTGTGCAGTATCAACCAATGATCAATCTTCTCATAAAAGGAGGCCTTCAAGTTTGTGCCATTCCTAGACGTCCTATGCCCTAA 1524 40.88 MELLSRPISVAVVLLLISIVVRQILAGKLRKKKYHPIAGTVFHQLLNFHRLQDYMTDLARKHKTYRLLGPFRNEVYTSDPPNVEYILRTNFENFGKGSHNYRILRDLLGDGIFTVDGEKWRQQRKISSYEFSTKVLRDYSSVIFRKTAVKLANIVSEAAISNRIIDIQDLFMKTTLDSIFHVSFGIDLDSLHGSNEEMNKFCSAFEASSTMTLWRYVDVIWPIKKALNIGSEAILKENMKIVDEYIYKLISSALEQREKLGDNALVDEFMKRENIVSRFLQAETSDPKYLRDIILNFVIAGKDTTAVTLAWFIYMLCKHPAVQERVAREIKEVTNVEDVTNFAEFAARLTEESLEKMQFLTAAINETLRLYPAVPVDAKICFSDDTLPDGFSVRKGDMVSYQPYAMGRMKFIWGDDAEEFRPERWFDGDGNPQPQSPFKFTAFQAGPRICLGKEFAYRQIKIISALLLSCFKFKMSDEKKIVQYQPMINLLIKGGLQVCAIPRRPMP 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1934670 1940234 + ClCG05G002020.1 Cla05g00218 271708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g00218 507 PANTHER CYTOCHROME P450 8 504 - -
Cla05g00218 507 SUPERFAMILY Cytochrome P450 33 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g00218 507 Gene3D Cytochrome P450 28 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g00218 507 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g00218 507 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g00218 507 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g00218 507 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g00218 507 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g00218 507 PANTHER CYTOCHROME P450-RELATED 8 504 - -
Cla05g00218 507 Pfam Cytochrome P450 35 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g00218 507 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g00218 507 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g00218 507 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla05g00218 507 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00218 Cla-Chr5:1934670 Cla11g00884 Cla-Chr11:14972065 5.78E-136 dispersed
Cla05g00218 Cla-Chr5:1934670 Cla05g00223 Cla-Chr5:1993434 3.67E-168 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g00218 - - csv:101210237 910.598