Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla05g00223 | ATGGAACTGATTATCAATATCTTCACCCTCATTTTCATCGTTCTCTCCCTCTTCTGTCTCTCCTTCTTCATTCTCCTCCTCCGAACGCTCGCCGGAAAGTCCATAACCAACTCCGACTACCCGCCGGTGTACGGCACCATTTACGGCCAGGCTTTCTACTTCAACAACCTGTACGACCATCTGACGGCGGTGGCGAAACGGCATAGAACCTTCCGACTGATCGGGACGGCGTACAGCGAGATATACACGGTCGATCCGAGAAACATCGAACAGATATTGAAGACGAAATTCGACAAGTACTCGAAAGGAAGGAAAGATGAAGAAGTGTGTGGGGATTTGTTCGGAGAGGGAATTTTTTTGGTGGATGGAGAAAAGTGGAAGCAGCAGAGGAAATTGGCGAGCTATGAATTCTCGACGAAGATTGTTAGGGATTTTAGTTGCTCTGTTTTCAGAAGAAATGCGGGTAAACTTGTTGGAATTCTTTGGGAGTTCTCCGCCATGGCTCGGGTCTTCGATGTCCAGGATTTGCTAATGCGATGCTCTTTGGACTCCATTTTCAAAGTTGGGTTCGGCGTCGATTTGAATTGCTTGGAGGAACCAAGCAAAGCAGGGAGCGGGTTCACGAAGGCCTTTGATGATTCTAGCGCTCAGGTTTTTTGGCGCTACATCGATCCTTTCTGGAAATTTAAAAGATTTCTCAACATTGGTTCCGAAGCTTCGTTTAGGAACAACCTCAAGGTAATCGATGCTTTTGTGCACCGGTTGATCAGTGCTAGGAGAAAATTGCTTCACCAACCAAATCTCAAGAATGACAAAGAGGACATACTTTCGAGGTTTCTGATGGAAAGTGAGAAGGATCCGACAAGAATGAATGATCAATATCTGAGAGATATAGTCCTGAATTTCATGTTGGCTGGCAGGGATACAACTGCAGGAACTCTGTCTTGGTTCTTCTATATGCTATGCAAGAACCCTTTGATACAGGAAAAAGTTGCAGAAGAAGTGAGCCAAATTGTTGGGGTTCAAGGGGAAGAAGCTGATATAAATTTGTTCATACAAAACTTAACTGATTCAGCTCTTGATAAAATGCATTATCTCCATGCAGCATTGACAGAGACTCTAAGGCTCTACCCTGCTGTCCCTGTGGATGGAAGGACTGCAGAAATTGATGACATTCTTCCTGATGGCTATAAACTAAGAAAAGGGGATGGAGTATACTACTTGGCCTATTCCATGGGCAGGATGCCCTGCCTTTGGGGAGAAGATGCTGAAGATTTTAAACCAGAGAGATGGCTTGAAAATGGAACTTTTCGACCCGAATCCCCTTTCAAATTCATAGCATTTCATGCGGGTCCTCGAACGTGTTTGGGAAAGGATTTTGCTTATCGACAAATGAAGATAGTATCTGCTACACTGCTTCATTTTTTTCGATTCAAATTAGCCGATCCAACGAGAAATATAACTTATAGGATCATGCTTACCCTTCACATCGATGGAGGTTTCAAATTCATTCAACGTCCCGAATTCCCTCGCTTTGCTCCGTCTCCACATTTCTTGCTACCGGAGTTCGACGGTGGCCATCCGATGAAATCTTTGGCGAAGGACGACACCGAATACCCGAAGCGGCAATGGTCCTTGCAAGACTTCGACGTAGGAAAGCCCCTCGGCAAAGGAAAATTCGGCAGAGTCTATCTAGCAAGAGAAGTCAGGGAGCTCCGATTTGATTTTCAGAGCAAGTATATAGTAGCACTGAAGGTGATTTTCAAGGAGCAGATGGAGAAGTACAGGATTCATCATCAGTTAAGGAGAGAGATGGAAATCCAGACCAGTCTTCGGCACCCCAACATCTTGCGCCTCTATGGATGGTTTCATGATGCCGAACGGATTTTCTTGATATTGGAATACGCTCACCGCGGTGAGCTTTATAGGGAGCTTAGGAAAACTGGTCATCTCAGCGAGAAGCAAGCTGCCACCTACATTTTAAGCCTCACACAAGCACTGGCATACTGCCATGAGAAGCATGTGATTCACAGGGACATTAAGCCAGAAAATTTGCTCCTTGATCATGAGGGTCGGTTGAAAATTGCAGATTTTGGATGGTCTGTACAGTCAAGAAGCAAGAGACATACCATGTGTGGAACTCTTGATTATTTAGCCCCAGAAATGGTGGAGAATAAAGCTCACGACTATGCAGTAGATAATTGGACTTTGGGCATCCTTTGCTATGAGTTCCTTTATGGAGTGCCTCCATTTGAAGCTGAGAGTCAAAGTGACACGTTTAAAAGGATAGTGAAGGTTGATTTGGATTTTCCTTTGGCCCCTCATGTTTCTTCAGAAGCAAAAGACCTGATAGGCCGGCTATTGGTGAAGGATTCCTCTAGAAGACTTTCACTTCAGAAGATAGTGGAGCATCCTTGGATAATCAAGTATGCTGATCCATCTGGTATTTGCAATACTAGGTAG | 2463 | 44.7 | MELIINIFTLIFIVLSLFCLSFFILLLRTLAGKSITNSDYPPVYGTIYGQAFYFNNLYDHLTAVAKRHRTFRLIGTAYSEIYTVDPRNIEQILKTKFDKYSKGRKDEEVCGDLFGEGIFLVDGEKWKQQRKLASYEFSTKIVRDFSCSVFRRNAGKLVGILWEFSAMARVFDVQDLLMRCSLDSIFKVGFGVDLNCLEEPSKAGSGFTKAFDDSSAQVFWRYIDPFWKFKRFLNIGSEASFRNNLKVIDAFVHRLISARRKLLHQPNLKNDKEDILSRFLMESEKDPTRMNDQYLRDIVLNFMLAGRDTTAGTLSWFFYMLCKNPLIQEKVAEEVSQIVGVQGEEADINLFIQNLTDSALDKMHYLHAALTETLRLYPAVPVDGRTAEIDDILPDGYKLRKGDGVYYLAYSMGRMPCLWGEDAEDFKPERWLENGTFRPESPFKFIAFHAGPRTCLGKDFAYRQMKIVSATLLHFFRFKLADPTRNITYRIMLTLHIDGGFKFIQRPEFPRFAPSPHFLLPEFDGGHPMKSLAKDDTEYPKRQWSLQDFDVGKPLGKGKFGRVYLAREVRELRFDFQSKYIVALKVIFKEQMEKYRIHHQLRREMEIQTSLRHPNILRLYGWFHDAERIFLILEYAHRGELYRELRKTGHLSEKQAATYILSLTQALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGVPPFEAESQSDTFKRIVKVDLDFPLAPHVSSEAKDLIGRLLVKDSSRRLSLQKIVEHPWIIKYADPSGICNTR | 820 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1993434 | 2003315 | + | ClCG05G002080.1 | Cla05g00223 | 271713 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla05g00223 | 820 | Gene3D | Transferase(Phosphotransferase) domain 1 | 640 | 815 | - | - | |
Cla05g00223 | 820 | ProSiteProfiles | Protein kinase domain profile. | 549 | 807 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla05g00223 | 820 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00223 | 820 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00223 | 820 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00223 | 820 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00223 | 820 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00223 | 820 | Pfam | Protein kinase domain | 550 | 807 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla05g00223 | 820 | PANTHER | CYTOCHROME P450 | 7 | 508 | - | - | |
Cla05g00223 | 820 | PANTHER | CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 | 7 | 508 | - | - | |
Cla05g00223 | 820 | CDD | STKc_Aurora | 548 | 807 | - | - | |
Cla05g00223 | 820 | SUPERFAMILY | Cytochrome P450 | 42 | 506 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00223 | 820 | Pfam | Cytochrome P450 | 50 | 484 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00223 | 820 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506|GO:0016705 | |
Cla05g00223 | 820 | SMART | serkin_6 | 549 | 807 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla05g00223 | 820 | SUPERFAMILY | Protein kinase-like (PK-like) | 538 | 812 | IPR011009 | - | |
Cla05g00223 | 820 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00223 | 820 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00223 | 820 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00223 | 820 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00223 | 820 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 675 | 687 | IPR008271 | GO:0004672|GO:0006468 | |
Cla05g00223 | 820 | Gene3D | Cytochrome P450 | 43 | 508 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla05g00223 | 820 | ProSitePatterns | Protein kinases ATP-binding region signature. | 555 | 585 | IPR017441 | GO:0005524 | |
Cla05g00223 | 820 | Gene3D | Phosphorylase Kinase; domain 1 | 537 | 639 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g00223 | Cla-Chr5:1993434 | Cla11g01469 | Cla-Chr11:28335109 | 5.39E-128 | dispersed | |
Cla11g00183 | Cla-Chr11:2179226 | Cla05g00223 | Cla-Chr5:1993434 | 8.30E-34 | dispersed | |
Cla05g00218 | Cla-Chr5:1934670 | Cla05g00223 | Cla-Chr5:1993434 | 3.67E-168 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80528 | PF00067 | p450 | 1.10E-73 | No_clan | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla05g00223 | - | - | csv:101210732 | 909.057 |