Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g00225 ATGACACAAAACCTCGTTATCTCAATTTCTCGAGGAAATCGGCATACGGCCATGGAGAGCAATCCAGCCGCCTCCCCCGTCGTCGTTAGCAATACCCCAAGCATCCCGCCGGAGAAACGTAACCGTTCCATCTTCGACGTCCCGGCCGACTTCTTTGATTCCTGCAAACTCCTTCGTTCTCCACACTCATACACCTCATCAACCAGCGGCAGCAACAGGGACAGCTCAAGCGCAGAAAACACAGTCGATTCGGAGCAGAACTACAGGGATTTGAAAGAAAGTCCCGTCGCCCACCGATGGACCTGCAACACATGCAAGGCCGAGTTCGAGTCCCTGCTTGACCAGCGTTCGCACTTCAAATCCGACCTTCACCGGTTCAATGTGAAACTAAGCATTGCTGGAAAGAATATTGTGAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTTTGATGTGTCAAGTATTTCTGGATCAGAGGACGAAACAGAGAAGGAGGTTAATTTTCGGAATGAAGGGCCTAAGGGAACAAGTGATACTGCGAACAAGAAGAGGTTGTTTGTTCATCTTCAAACCGGTGAAAGAGCTTCGGTCTGGAAGTGTTTGCTCATAAATGAGTCAGATAATATTTCATACGAAGATGATAAAACATCAATCAGTGGTAATGGCGTTCATGCCCAGTACCTTAGAGAGAATGAAATCATAGCAAGATTAAAATATTTAAATCATGAGCCAAGAGATGGCTCCCATTTGCGGATAGTGTTGCTTGCAAGTGGTGGGCACTTCGCGGGTTGTGTCTTCGATGGAAACATAGTTGTAGCTCATAAAACCTTTCACAGATATGTGGTGAGAGCCAAGTCTGGAAAGAAACAGTCATCAAAAGATGCAAGTGGCAAATCAATCAGTTCCGCTGGGGCTTCACTTCGTCGTCATAATGAACTGGCATTGAAGAAGGAAATTCAAGATCTCCTTGCTGCTTGGAAGTCCTACTTTAATGCTTCATCTTGCGTTTATATTTATGCTCCTTCAAACAATCGGCAATTGCTTTTTAATGGAGACAAGCCTTACTTTAGTGATCAGCATGCTGCTGTTCGGAATATTCCTTTGACTGTTCGAAGGCCTACATTGAAAGAAGCTCGGCGTGTTTATGAACAATTGGTGCAAGTAGTGTATGAAGTAGATGAGAATGAAATATTGTCTACCACTGAGCATGATTCACTATTAAGCGCAGTTACAATGGACAATGGCACCCGAGGTATAAGTGGACAGGCAGTAATTGGAGATTTGGAGAAGGATGCTTGTACACATCTTGAAGAATCTGTTGAACACCCCAAAACTAGTGAGAGTGAAAGTGAAGTTATTTGTAGAACTACACCTTTACATGAAGCATCACAGTCTGGAAATGCAGATAAGGTTTTGGAACTCCTTGAACAGGGTCTTGATCCTTGCATCAAAGATGAAAGAGGACGTACTCCTTATATGCTAGCAAGCGAGAAGGAAGTCCGAAATAACTTTAGAAGGTTCATGGCTTCAAACCTTGATAAGTGGGATTGGAATGCTGCTAAGGTGCCGAGCGCATTAACCAAGGAAATGGAGGAATCTCAAGCAGCTAAGCAGGCTGAAAAAGATGCCAAGCGAAAGGCTAGAGCAAAGGAGTTGAAAAAATTAAAGAAAGAAAAGGCCAAGAAAGCACAGGCCCTGGATGCTGAATCCCAAAAGGCTGTGAAGCCGGAACAGAGTAGAGGAATCGGCTCTATTTTGAATTCTCGGGCTGAATCAACCAGTGGGAAACTGATTACCAAAGAGATGGCACAGGCTGCTGAACGGGAAAAGAGAGCAGCAGCTGCTGAGAGAAGAATGGCAGCCATGGTCGCAGCTGCAGCCACCAACAATTCCTCGTTGACTACTCCTAACAGCTCGCAGACTAAAAGCGGGTTGGCAAGGGATGTCAACTGCTCCTGCTGCGATACTTCGCTGGCCGGTAAAGTTCCTTTCCACCGGTATAACTACAAATATTGCAGCTCGACATGCATGCATGTACACAGAGAGGCCCTTGATGAAAACTAG 2076 45.23 MTQNLVISISRGNRHTAMESNPAASPVVVSNTPSIPPEKRNRSIFDVPADFFDSCKLLRSPHSYTSSTSGSNRDSSSAENTVDSEQNYRDLKESPVAHRWTCNTCKAEFESLLDQRSHFKSDLHRFNVKLSIAGKNIVKEDDFDELTSDSFRDFDVSSISGSEDETEKEVNFRNEGPKGTSDTANKKRLFVHLQTGERASVWKCLLINESDNISYEDDKTSISGNGVHAQYLRENEIIARLKYLNHEPRDGSHLRIVLLASGGHFAGCVFDGNIVVAHKTFHRYVVRAKSGKKQSSKDASGKSISSAGASLRRHNELALKKEIQDLLAAWKSYFNASSCVYIYAPSNNRQLLFNGDKPYFSDQHAAVRNIPLTVRRPTLKEARRVYEQLVQVVYEVDENEILSTTEHDSLLSAVTMDNGTRGISGQAVIGDLEKDACTHLEESVEHPKTSESESEVICRTTPLHEASQSGNADKVLELLEQGLDPCIKDERGRTPYMLASEKEVRNNFRRFMASNLDKWDWNAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLKKEKAKKAQALDAESQKAVKPEQSRGIGSILNSRAESTSGKLITKEMAQAAEREKRAAAAERRMAAMVAAAATNNSSLTTPNSSQTKSGLARDVNCSCCDTSLAGKVPFHRYNYKYCSSTCMHVHREALDEN 691
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 2008774 2016543 + ClCG05G002100.2 Cla05g00225 271715
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla05g00225 691 MobiDBLite consensus disorder prediction 158 175 - -
Cla05g00225 691 Pfam Vms1-associating treble clef domain 653 688 IPR041540 -
Cla05g00225 691 MobiDBLite consensus disorder prediction 62 84 - -
Cla05g00225 691 MobiDBLite consensus disorder prediction 532 584 - -
Cla05g00225 691 ProSitePatterns Zinc finger C2H2 type domain signature. 102 124 IPR013087 -
Cla05g00225 691 ProSiteProfiles Ankyrin repeat profile. 458 490 IPR002110 GO:0005515
Cla05g00225 691 Gene3D - 447 571 IPR036770 -
Cla05g00225 691 MobiDBLite consensus disorder prediction 10 41 - -
Cla05g00225 691 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 38 687 - -
Cla05g00225 691 MobiDBLite consensus disorder prediction 537 551 - -
Cla05g00225 691 ProSiteProfiles Ankyrin repeat region circular profile. 458 490 - -
Cla05g00225 691 SUPERFAMILY Ankyrin repeat 460 512 IPR036770 -
Cla05g00225 691 MobiDBLite consensus disorder prediction 62 90 - -
Cla05g00225 691 MobiDBLite consensus disorder prediction 10 38 - -
Cla05g00225 691 Pfam Bacteroidetes VLRF1 release factor 256 392 IPR041175 -
Cla05g00225 691 Coils Coil 534 576 - -
Cla05g00225 691 MobiDBLite consensus disorder prediction 157 183 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g00225 K26089 - csv:101216211 1049.65