Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla05g00225 | ATGACACAAAACCTCGTTATCTCAATTTCTCGAGGAAATCGGCATACGGCCATGGAGAGCAATCCAGCCGCCTCCCCCGTCGTCGTTAGCAATACCCCAAGCATCCCGCCGGAGAAACGTAACCGTTCCATCTTCGACGTCCCGGCCGACTTCTTTGATTCCTGCAAACTCCTTCGTTCTCCACACTCATACACCTCATCAACCAGCGGCAGCAACAGGGACAGCTCAAGCGCAGAAAACACAGTCGATTCGGAGCAGAACTACAGGGATTTGAAAGAAAGTCCCGTCGCCCACCGATGGACCTGCAACACATGCAAGGCCGAGTTCGAGTCCCTGCTTGACCAGCGTTCGCACTTCAAATCCGACCTTCACCGGTTCAATGTGAAACTAAGCATTGCTGGAAAGAATATTGTGAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTTTGATGTGTCAAGTATTTCTGGATCAGAGGACGAAACAGAGAAGGAGGTTAATTTTCGGAATGAAGGGCCTAAGGGAACAAGTGATACTGCGAACAAGAAGAGGTTGTTTGTTCATCTTCAAACCGGTGAAAGAGCTTCGGTCTGGAAGTGTTTGCTCATAAATGAGTCAGATAATATTTCATACGAAGATGATAAAACATCAATCAGTGGTAATGGCGTTCATGCCCAGTACCTTAGAGAGAATGAAATCATAGCAAGATTAAAATATTTAAATCATGAGCCAAGAGATGGCTCCCATTTGCGGATAGTGTTGCTTGCAAGTGGTGGGCACTTCGCGGGTTGTGTCTTCGATGGAAACATAGTTGTAGCTCATAAAACCTTTCACAGATATGTGGTGAGAGCCAAGTCTGGAAAGAAACAGTCATCAAAAGATGCAAGTGGCAAATCAATCAGTTCCGCTGGGGCTTCACTTCGTCGTCATAATGAACTGGCATTGAAGAAGGAAATTCAAGATCTCCTTGCTGCTTGGAAGTCCTACTTTAATGCTTCATCTTGCGTTTATATTTATGCTCCTTCAAACAATCGGCAATTGCTTTTTAATGGAGACAAGCCTTACTTTAGTGATCAGCATGCTGCTGTTCGGAATATTCCTTTGACTGTTCGAAGGCCTACATTGAAAGAAGCTCGGCGTGTTTATGAACAATTGGTGCAAGTAGTGTATGAAGTAGATGAGAATGAAATATTGTCTACCACTGAGCATGATTCACTATTAAGCGCAGTTACAATGGACAATGGCACCCGAGGTATAAGTGGACAGGCAGTAATTGGAGATTTGGAGAAGGATGCTTGTACACATCTTGAAGAATCTGTTGAACACCCCAAAACTAGTGAGAGTGAAAGTGAAGTTATTTGTAGAACTACACCTTTACATGAAGCATCACAGTCTGGAAATGCAGATAAGGTTTTGGAACTCCTTGAACAGGGTCTTGATCCTTGCATCAAAGATGAAAGAGGACGTACTCCTTATATGCTAGCAAGCGAGAAGGAAGTCCGAAATAACTTTAGAAGGTTCATGGCTTCAAACCTTGATAAGTGGGATTGGAATGCTGCTAAGGTGCCGAGCGCATTAACCAAGGAAATGGAGGAATCTCAAGCAGCTAAGCAGGCTGAAAAAGATGCCAAGCGAAAGGCTAGAGCAAAGGAGTTGAAAAAATTAAAGAAAGAAAAGGCCAAGAAAGCACAGGCCCTGGATGCTGAATCCCAAAAGGCTGTGAAGCCGGAACAGAGTAGAGGAATCGGCTCTATTTTGAATTCTCGGGCTGAATCAACCAGTGGGAAACTGATTACCAAAGAGATGGCACAGGCTGCTGAACGGGAAAAGAGAGCAGCAGCTGCTGAGAGAAGAATGGCAGCCATGGTCGCAGCTGCAGCCACCAACAATTCCTCGTTGACTACTCCTAACAGCTCGCAGACTAAAAGCGGGTTGGCAAGGGATGTCAACTGCTCCTGCTGCGATACTTCGCTGGCCGGTAAAGTTCCTTTCCACCGGTATAACTACAAATATTGCAGCTCGACATGCATGCATGTACACAGAGAGGCCCTTGATGAAAACTAG | 2076 | 45.23 | MTQNLVISISRGNRHTAMESNPAASPVVVSNTPSIPPEKRNRSIFDVPADFFDSCKLLRSPHSYTSSTSGSNRDSSSAENTVDSEQNYRDLKESPVAHRWTCNTCKAEFESLLDQRSHFKSDLHRFNVKLSIAGKNIVKEDDFDELTSDSFRDFDVSSISGSEDETEKEVNFRNEGPKGTSDTANKKRLFVHLQTGERASVWKCLLINESDNISYEDDKTSISGNGVHAQYLRENEIIARLKYLNHEPRDGSHLRIVLLASGGHFAGCVFDGNIVVAHKTFHRYVVRAKSGKKQSSKDASGKSISSAGASLRRHNELALKKEIQDLLAAWKSYFNASSCVYIYAPSNNRQLLFNGDKPYFSDQHAAVRNIPLTVRRPTLKEARRVYEQLVQVVYEVDENEILSTTEHDSLLSAVTMDNGTRGISGQAVIGDLEKDACTHLEESVEHPKTSESESEVICRTTPLHEASQSGNADKVLELLEQGLDPCIKDERGRTPYMLASEKEVRNNFRRFMASNLDKWDWNAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLKKEKAKKAQALDAESQKAVKPEQSRGIGSILNSRAESTSGKLITKEMAQAAEREKRAAAAERRMAAMVAAAATNNSSLTTPNSSQTKSGLARDVNCSCCDTSLAGKVPFHRYNYKYCSSTCMHVHREALDEN | 691 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 2008774 | 2016543 | + | ClCG05G002100.2 | Cla05g00225 | 271715 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla05g00225 | 691 | MobiDBLite | consensus disorder prediction | 158 | 175 | - | - | |
| Cla05g00225 | 691 | Pfam | Vms1-associating treble clef domain | 653 | 688 | IPR041540 | - | |
| Cla05g00225 | 691 | MobiDBLite | consensus disorder prediction | 62 | 84 | - | - | |
| Cla05g00225 | 691 | MobiDBLite | consensus disorder prediction | 532 | 584 | - | - | |
| Cla05g00225 | 691 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 102 | 124 | IPR013087 | - | |
| Cla05g00225 | 691 | ProSiteProfiles | Ankyrin repeat profile. | 458 | 490 | IPR002110 | GO:0005515 | |
| Cla05g00225 | 691 | Gene3D | - | 447 | 571 | IPR036770 | - | |
| Cla05g00225 | 691 | MobiDBLite | consensus disorder prediction | 10 | 41 | - | - | |
| Cla05g00225 | 691 | PANTHER | ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 38 | 687 | - | - | |
| Cla05g00225 | 691 | MobiDBLite | consensus disorder prediction | 537 | 551 | - | - | |
| Cla05g00225 | 691 | ProSiteProfiles | Ankyrin repeat region circular profile. | 458 | 490 | - | - | |
| Cla05g00225 | 691 | SUPERFAMILY | Ankyrin repeat | 460 | 512 | IPR036770 | - | |
| Cla05g00225 | 691 | MobiDBLite | consensus disorder prediction | 62 | 90 | - | - | |
| Cla05g00225 | 691 | MobiDBLite | consensus disorder prediction | 10 | 38 | - | - | |
| Cla05g00225 | 691 | Pfam | Bacteroidetes VLRF1 release factor | 256 | 392 | IPR041175 | - | |
| Cla05g00225 | 691 | Coils | Coil | 534 | 576 | - | - | |
| Cla05g00225 | 691 | MobiDBLite | consensus disorder prediction | 157 | 183 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla05g00225 | K26089 | - | csv:101216211 | 1049.65 |