Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g00265 ATGGAAGAAGAGCTGAAACTATTCAGAACGTGGTCGAGTCCGTTCCCTCTGAGGATAGTATGGGCGTTGAAATTGAAAGGATTAGAATACGATACCGTTTACGAAGATCTGGCCAACAAGAGCCCCTTGCTTTTGGAGTACAATCCGATTCATAAGAAAGTTCCGGTGCTCGTCCATGGCGGAAAGCCGATCGCCGAATCGCTCGTTATTCTTGAATACATCGACGAAACATGGAAGCAAAATCCATTGCTGCCTCAGGATCCTTACCAGAGAGCCGTTGCTCGCTTTTGGGCCAAATTTGGGGATGACAAGGTTTTGGAATCTATAAAGAAAGTGTTTATGAACCAAGGGAAAGTGAGAGAGGAAGGTGTGGAAGAAGCCTTGGAGAATTTGAAGCATTTGGAAGAAGAGTTAAAAGGAAAGAGGTTCTTTGGAGGGGAGGCCATTGGGTTTGTGGATATTACGGTTGGGTGGCTTGCAAACATAGCAAGTGTAGTGGAGGAAGTTGTTGGAGTTGAACTGATAACTGAACAAAGGTTTCCCCTCTTGTCCAAATGGATAAAGGAATTTGCTGCCTCTCCAATCATCAATGAAAACTGGCCGCCTAGAGACAAGCTTGTCACTAAGTACCAAGCAATGCGTCAAACTTTTATGAATAAACAAGCATAA 669 44.25 MEEELKLFRTWSSPFPLRIVWALKLKGLEYDTVYEDLANKSPLLLEYNPIHKKVPVLVHGGKPIAESLVILEYIDETWKQNPLLPQDPYQRAVARFWAKFGDDKVLESIKKVFMNQGKVREEGVEEALENLKHLEEELKGKRFFGGEAIGFVDITVGWLANIASVVEEVVGVELITEQRFPLLSKWIKEFAASPIINENWPPRDKLVTKYQAMRQTFMNKQA 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2393890 2396643 - ClCG05G002550.1 Cla05g00265 271755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g00265 222 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Cla05g00265 222 Gene3D - 84 221 - -
Cla05g00265 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cla05g00265 222 Gene3D Glutaredoxin 1 83 - -
Cla05g00265 222 Pfam Glutathione S-transferase, C-terminal domain 118 194 IPR004046 -
Cla05g00265 222 CDD GST_N_Tau 5 78 - -
Cla05g00265 222 SUPERFAMILY GST C-terminal domain-like 76 217 IPR036282 -
Cla05g00265 222 CDD GST_C_Tau 88 207 IPR045074 GO:0004364|GO:0006749
Cla05g00265 222 Coils Coil 219 222 - -
Cla05g00265 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 210 IPR010987 -
Cla05g00265 222 SFLD Glutathione Transferase (cytosolic) 2 221 IPR040079 -
Cla05g00265 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 215 IPR045073 -
Cla05g00265 222 PANTHER S-TRANSFERASE, PUTATIVE-RELATED 1 215 - -
Cla05g00265 222 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Cla05g00265 222 SUPERFAMILY Thioredoxin-like 5 104 IPR036249 -
Cla05g00265 222 Coils Coil 121 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00747 Cla-Chr4:22474622 Cla05g00265 Cla-Chr5:2393890 1.78E-58 dispersed
Cla05g00265 Cla-Chr5:2393890 Cla06g01435 Cla-Chr6:27926213 3.72E-69 dispersed
Cla05g00265 Cla-Chr5:2393890 Cla05g02445 Cla-Chr5:35895016 9.64E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g00265 K00799 - csv:101219529 413.305