Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g00288 ATGAGAAATACCTTGAAGCTTCCGAGAGGCGTCCATGGCCAATCGGTGAGGATACCGGGAGTAGAAGCCATTAATGCAAAAGCTGAAGCTCAGAGTGTTGCTCCCGAAGATGATGCATTAGATGATAGCAGAGGCGCTTTGGAAACTCTGAAGATGGAGCAGCAATATCCACAACGAAGAGGAGCCGACGCAGTTTTACATCTTCAGCCAAACTCCTCAATTTCTATTGCATATCACTCACTTTTTGGTCCACACGATGATTTGGTTCTTCTTGAGGTTGATGAAAAGCTTCTGGAAGAAGTCCTCCACCAACGAGTAAGCATCAGAGGACAGCCAGAAGAAGATGCAGTCTGTTGCACGAAGTCGAAAACTTATGGAATCAAGTACGTGGGAACTTCCAATTCTGTACTTCTCATACCTCCATCTAGTCGATCAGAATACTACGAAAATGAGTTAGATAGCCATCAGGACAGCTCTAAAGAAGTTGCACCTGTGATTAAAGTAGCTCCAGGTATCATGGAACTTCATGAGATTGCTCCCAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGGAACCTTACAGCTTAGCTGATGAGTGGGAAAGTGAAGAGGTGGACAAATACAAAAAACGAATGTATAATTGGGATGATCTTATAAACAAGGTTCAGGCTAGCGATGATGAACTGAAAGCTGGATTACAAGCACTTTCCGCAGTTGAGATTGATGGGTTCTGGAGAGTCGTGGATGAAAAATACATGGACTCCATGCTACAGATGCTTTTGCATAACACGATTTTAAATGACTGGTCTCTGGATGCACTTGATGAAGGTGTAATCATGAGAGTGATGAAAATGGATAGTTTTCCTGAAAAACTTGTGCAGCATTGTCTCCATGTTTATGGTGATAAATTGGATGGAAACGAGGGGAAAGGTTGTTTATGGAGATTGGACGAGAAACAGGTTTGTGTGCATTTTGCAAGAGAAGTCTTGAGGAAAGGAAAGATGAAGCTAGAGCATTTCATGGATGAATGGAGGCAGAAAATCCCACTAGGAATGCGTGCCAACTTTGATATGTTGGAAGGTGAAGTTCTGACTGAGAGACTTGGTGTTGAGACATGGGTTCGTGGTTTCAGAGTTTGTTCCTTGCCATTGAATCCTGCCGAGCGTTTCACCATTTTGTTTAAAGAGCGACCAAAATGGGAGTGGAAAGATTTGCAGCCCTACATCAGGGATCTTACAGTTCCAGGTCTTTCTTCAGAAGGTTTGCTTCTCAAATACACCCGAAGAACTCAACCGAACCCCGAAGCAGAAGCTGTGTTCAGTGCAAGATAG 1332 43.32 MRNTLKLPRGVHGQSVRIPGVEAINAKAEAQSVAPEDDALDDSRGALETLKMEQQYPQRRGADAVLHLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQPEEDAVCCTKSKTYGIKYVGTSNSVLLIPPSSRSEYYENELDSHQDSSKEVAPVIKVAPGIMELHEIAPRIDKLKLLLSEEPYSLADEWESEEVDKYKKRMYNWDDLINKVQASDDELKAGLQALSAVEIDGFWRVVDEKYMDSMLQMLLHNTILNDWSLDALDEGVIMRVMKMDSFPEKLVQHCLHVYGDKLDGNEGKGCLWRLDEKQVCVHFAREVLRKGKMKLEHFMDEWRQKIPLGMRANFDMLEGEVLTERLGVETWVRGFRVCSLPLNPAERFTILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2640042 2646433 - ClCG05G002770.1 Cla05g00288 271778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g00288 443 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 58 443 IPR019128 GO:0007064|GO:0031390
Cla05g00288 443 Pfam Sister chromatid cohesion protein Dcc1 89 409 IPR019128 GO:0007064|GO:0031390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g00288 K11271 - csv:101203202 720.694