Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g00305 ATGTATGAGGCTGAGATCCACAATGGTTTCGGCAAATCCTCCATTTTCTCAGCTTCCAAACAGAGCCAGCGGAACCCTTCCACTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCTTCTCTCTCCGCCATGTTCCGACGAGCTTCCAGCCTTTTGGCCCGCTCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCCGCAGCTGCTTCCACCGACGATGCCTTTGTCTCCGCCTGGAAGAAGGTGATCCCCAATATTGACCCGCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAGCTCACTGTCAACTTCGTCCTTCCTTATGCCTCCGAACTCTCGGCCAAAGAGGTTGACATGGTCATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCTACAATCGCCGAGTTAAAGCCAGGGGTTCTATCAGTACACGATGGGAGCGACATCAAAAAATACTTTGTCAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCCGACATAATCGCTGTCGAAGCTGTGCCTGTAGATCAAATCGATGCTAGCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTTGATGTGCACAGTGCCCTGAATTCTGCCCTTACAGGATAG 753 51.26 MYEAEIHNGFGKSSIFSASKQSQRNPSTSPSPSSSLSDLARAERPPSLSAMFRRASSLLARSFLSARTRSFSTDLPAAASTDDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHDGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2796258 2798848 + ClCG05G002910.1 Cla05g00305 271795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g00305 250 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 120 191 IPR020546 GO:0015986
Cla05g00305 250 MobiDBLite consensus disorder prediction 13 42 - -
Cla05g00305 250 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 120 201 IPR036771 -
Cla05g00305 250 Gene3D - 207 249 - -
Cla05g00305 250 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 51 250 - -
Cla05g00305 250 Coils Coil 215 235 - -
Cla05g00305 250 Gene3D - 108 206 IPR036771 -
Cla05g00305 250 MobiDBLite consensus disorder prediction 13 40 - -
Cla05g00305 250 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 51 250 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cla05g00305 250 Hamap ATP synthase epsilon chain [atpC]. 118 238 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cla05g00305 250 CDD F1-ATPase_delta 120 243 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g00305 K02134 - csv:101206104 350.517