Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla05g00393 | ATGGTTTCTCGAATGAACGACAATGCCGGGCCAAGCAGAGCTCACCTTTTTCCATCTACATTCGGCGTTTCGCTTGGGATTCGCTACCTCGACCTTGGATCTGTGGCTGATCGAATTTCCCCCTCAATGGCTGGTCAAGTAAATCTAGTGGTTGGATCTCTTGTTTGGATTGAGGATCCTGAGGTAGCCTGGCTAGATGGGGAAGTCTTGGAAGTTAATGGTCAAGATATCAAAGTACTTTGTACAACAGGAACTACTGTTGAGGTCAAATCATCAAATGTCTATCCGAAGGATCCTGAATTTCCGCCATGTGGTGTGGATGATATGACAAAACTAGCTTATTTGCATGAGCCGGGGCTTCTACAAAATTTAAAATCTCGTTACGATGTTAATGAAATTTATACATATACTGGAAGTATACTAATAGCCGTAAATCCTTTTCGAAGACTTCCTCATTTATATGATAATCACATGATGCAACAATATAAAGGTGCAGCTTTAGGTGAGCTGAGCCCGCATCCCTTTGCCATTGCAAATTCTGCTTATAGACAGATGATTAATGAAAGTATCAGCCAGTCAATTTTAGTTAGTGGGGAAAGTGGTGCTGGCAAAACGGAGAGTACAAAGATGCTCATGCGCTATCTTGCCCATGTCGGAGGGAGAGCTGGAGGGAAGGCTGCAACTGGTGAACGTTCTGTAGAGCAGCAAGTACTAGAGTCGAACCCTGTTCTAGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGCCGGTTTGGTAAATTTGTGGAGATCCAATTTGATCAGAGTTGGAGAATTTCTGGAGCTGCTATTAGAACTTATTTATTAGAACGTTCCCGTGTTTGCCAAGTGTCTGATCCTGAGAGGAATTATCATTGCTTCTATATGCTTTGTGCTGCACCAACAGAGGAAATTGAAAAGTATAAATTAGGGAATCCAAGAACATTTCATTACCTTAATCAATCAAATTGCTGCGAACTTGATGGAGTGGATGATTCTAAGGAATATCTTTCTACCAGGAAAGCCATGGATGTTGTTGGAATAAGTACAACTGAGCAGGATGCAATATTTCGAGTGGTAGCTGCGGTACTTCATTTGGGCAACGTTGAATTTGCAAAGGGGAAGGATGCAGATTCCTCTGAACCGAAGGATGACAAAGCTCGGTTCCATCTCAAAATGGCAGCAGAACTATTCATGTGTGATGAGAAGGCTCTTGAAGATTCAATGTGTACTCGTGTGATAGTTACACGTGATGAAACCATAACTAAATGTCTCGATCCGGACTCTGCATCTCTTAGTAGGGATGCTTTAGCAAAGATTGTTTATTCAAGATTATTTGATTGGATTGTTGATAAGATTAATAACTCAATTGGCCAAGATCCTCATTCAAAGAACTTAATTGGGGTTCTGGATATCTATGGATTCGAGAGTTTCAAGACAAACAGCTTTGAGCAATTCTGTATTAACCTGACCAATGAGAAATTGCAGCAACATTTCAACCAGCATGTGTTCAAGATGGAGCAAGAAGAATATACAAAAGAAGAAATTGACTGGAGTTATATTGAATTTATTGATAATCAGGATGTTCTTGATCTCATTGAGAAGAAACCTGGTGGCGTCATTGCTCTTCTGGATGAGGCTTGCATGTTCCCGAGATCCACACATGACACTTTTGCGCAGAAACTATATCAAACTTTTAAGGACCATAAGCGTTTTAGTAAGCCGAAATTGTCACGAACTGACTTCACAATTTGTCATTATGCTGGTGATGTTACGTACCAAACTGAACTCTTCTTGGACAAAAACAAAGATTATGTTGTTGCGGAGCATCAAGCACTGTTGAGTGCTTCTAAGTGCCCCTTTGTTTCGGGGCTTTTCCCCCCCTTACCTGAAGAAACCTCCAAATCATCCAAGTTCTCATCAATAGGGACTCGATTTAAGCAACAACTTCAATCTTTGCTTGAGACACTAAATGCTACTGAGCCACACTACATACGCTGTGTAAAGCCAAACAATCTTCTTAAACCAGCCATCTTTGAGAACAATAATGTTTTACAGCAGCTCCGATGTGGGGGAGTCATGGAAGCAATCAGGATCAGTTGTGCTGGATATCCCACTAGGAAGACATTTGATGAATTTATTGGTCGGTTTACTATCTTGGCGCCTGATGTTTTGAAGGGGAGCTCTAATGAAGCGACTGCGTGTAAGAGGCTTTTGGAGAAAGTGAACCTTAAAGGGTATCAGATTGGTAAAACCAAAGTGTTTCTCAGGGCTGGTCAAATGGCAGAATTAGATGCTTGCCGAACTGAGGTTTTGGGAAGATCTGCTATTGTTATCCAAAGGAAAGTTCGCTCATATTTGGGGCGCAAAAACTTTATTTTGTTGCGGTTGGCTGCTATTCAAATTCAAGCCCTGTGTAGAGGGCAAGTTGCACGCCAGCATTATGAAGACATCAGAAAGGAAGCTGCTTCTATCAAAATCCAAAAGTATTGGCGTATGCATTTTGCCCGATGTTGCTATAAAAGATTGTGCTCTTCAGCTGTAGCTATTCAAGCTGGTATCCACGGTATGATTGCCCGTAAAGAGCTTGAGTTCAGGAGGCAGACAAGAGCTGCTATTATCATTCAGAGTCGATGTCGGCAATACTTGGCCCGCATGCATTATTTGAGGATCAAAAAAGCTGCAATTACTACTCAATGTGCTTGGAGAGGAAGAGTTGCACGGAAAGAACTTCGAAAGCTTAAAATGGCTGCTAAGGAAACAGGCGCTCTCCAAGCTGCTAAAAATCTGCTGGAGAAGCAAGTGGAAGAACTAACATGGAGATTGCAGCTAGAGAAACGAATGCGGGCTGACATGGAGGAAGCCAAGACTAAAGAAAACACAAAATTGAAGGCTGATTTGGAAGAAATGAGAACTCTATTTCAGGAAACGAAAGCACTGCTTAATGAGGAACGTGAAGCTGCAATGAAAGTAGTTGAGCAAGTTCCAGTCATACAGGAGGTTCCCGTTGTTGATCATGAGCTGATCAATAAGTTAACTACTGAAAATGAACAACTTAAGGCTCTTGTAAGTACTTTGGAAAATAAAATTGATGAAACAGAAAGGAAATTTGAGGAAAGTAACAGACTTAGTGAAGAGCGTCTGAAGCAGGCTACGGAGGCAGAGTCAAAGATAATTGAATTAAAGACTGCCATGCAAAGGCTTGAGGAAAAATTATCTGACTTGGAAACTGAGGACCAAATTCTGAGGCAGCAAACACTGCTAAAGCCTCCTTCAAGAAAGATGTCTGGACGCATAGCAATGCAGCCTTTGGAAAATGGCCACCATGAATTACTAAGCAACGCTCCATCAAAAAAGTACGGTACTGATGCTGATGCAAAATTGAGGAGATCCCAAATTGAAAGGCAGAATGAAGGCATGGATGCTCTGTCAAAATACCTGACACAGGATCTTGGATACAGTGAGGGAAAACCTGTTGCTGCTTTTGTAATTTATAAATCTTTTCTCCATTGGAGATCATTTGAAGCAGAAAAAACAAGTGTTTTTGATCGGCTTATTCAGCTGATTGGTTCTGCAATCGAGAATCAGGATGATAATGATCTTATGACCTATTGGTTATCCAACACAACTACATTGTTGTTCCTTCTTCAAAAGAGTTTAAAAACCACACCACGGAAGCCTCCCACCCCTACATCATTTTTTGAGCGGATGACCCAAGGTTTTCGGTCATCTTCTGCCCTTCCAGTTGGCACCCTTGATGTGGTGCGGCAAGTGGAAGCCAAATATCCTGCCCTACTTTTCAAGCAGCAGCTAACCGCATATGTAGAAAAGATATATGGAATAGTTAGAGACAACCTAAAGAAGGAACTATCGCCATTGATTTCAACTTGTATTCAGGCTCCCAGATCTTCGAGAGGAAATATTTTGAAATCATCTGGCCAGGAAAATAGTAGTAGCCCTTCCAGTAATTCATGGAGCAGCATCATTGATAACCTTAATGATCATCTCTGTAGATTGCAAAAGAACTTTGTGCCTAACGTTTTGGTTCAGAAGATATTCACTCAGGTTTTTTCATATATCAACGTTCAACTTTTTAACAGTCTTCTACTTCGTCGAGAGTGCTGTACGTTTAGCAATGGGGAATATGTGAAGTCAGGATTGGCTGAGTTAGAGATTTGGTGTGGCCAAGCACAAGAAGAGTATGCTGGGTCATCTTGGGATGAGCTAAAACCGGTGAGGCAAGCTGTTGGATTCTTGGTTATTCACCAGAAGTCTAGAATATCTTATGATGAAATTACAAATGATCTCTGTCCAATATTGAGCGTTCAACAGCTTTATAGAATATGTACTCTTTATTGGGACGACAATTACAATACCAGGAGTGTAGCTCCAGATGTTATTTCTAGCATGAAGGTTTTGATGACTGAGGATTCCAATGATGAAGATAGTAGTTCCTTTTTGTTGGATGACAATTCCAGTATACCTTTCTCAGTTGATGACGTATTCACTTCCCTGCAAGAAAAGAATTTTCAAGATATAAAGCCTCCGGCAGAACTACTAGAGAATCCGGCCTTCCAATTTTTACAGGAATAA | 4620 | 41.06 | MVSRMNDNAGPSRAHLFPSTFGVSLGIRYLDLGSVADRISPSMAGQVNLVVGSLVWIEDPEVAWLDGEVLEVNGQDIKVLCTTGTTVEVKSSNVYPKDPEFPPCGVDDMTKLAYLHEPGLLQNLKSRYDVNEIYTYTGSILIAVNPFRRLPHLYDNHMMQQYKGAALGELSPHPFAIANSAYRQMINESISQSILVSGESGAGKTESTKMLMRYLAHVGGRAGGKAATGERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQSWRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPTEEIEKYKLGNPRTFHYLNQSNCCELDGVDDSKEYLSTRKAMDVVGISTTEQDAIFRVVAAVLHLGNVEFAKGKDADSSEPKDDKARFHLKMAAELFMCDEKALEDSMCTRVIVTRDETITKCLDPDSASLSRDALAKIVYSRLFDWIVDKINNSIGQDPHSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGVIALLDEACMFPRSTHDTFAQKLYQTFKDHKRFSKPKLSRTDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCPFVSGLFPPLPEETSKSSKFSSIGTRFKQQLQSLLETLNATEPHYIRCVKPNNLLKPAIFENNNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFIGRFTILAPDVLKGSSNEATACKRLLEKVNLKGYQIGKTKVFLRAGQMAELDACRTEVLGRSAIVIQRKVRSYLGRKNFILLRLAAIQIQALCRGQVARQHYEDIRKEAASIKIQKYWRMHFARCCYKRLCSSAVAIQAGIHGMIARKELEFRRQTRAAIIIQSRCRQYLARMHYLRIKKAAITTQCAWRGRVARKELRKLKMAAKETGALQAAKNLLEKQVEELTWRLQLEKRMRADMEEAKTKENTKLKADLEEMRTLFQETKALLNEEREAAMKVVEQVPVIQEVPVVDHELINKLTTENEQLKALVSTLENKIDETERKFEESNRLSEERLKQATEAESKIIELKTAMQRLEEKLSDLETEDQILRQQTLLKPPSRKMSGRIAMQPLENGHHELLSNAPSKKYGTDADAKLRRSQIERQNEGMDALSKYLTQDLGYSEGKPVAAFVIYKSFLHWRSFEAEKTSVFDRLIQLIGSAIENQDDNDLMTYWLSNTTTLLFLLQKSLKTTPRKPPTPTSFFERMTQGFRSSSALPVGTLDVVRQVEAKYPALLFKQQLTAYVEKIYGIVRDNLKKELSPLISTCIQAPRSSRGNILKSSGQENSSSPSSNSWSSIIDNLNDHLCRLQKNFVPNVLVQKIFTQVFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELEIWCGQAQEEYAGSSWDELKPVRQAVGFLVIHQKSRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVAPDVISSMKVLMTEDSNDEDSSSFLLDDNSSIPFSVDDVFTSLQEKNFQDIKPPAELLENPAFQFLQE | 1539 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 3553666 | 3580118 | - | ClCG05G003810.2 | Cla05g00393 | 271883 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla05g00393 | 1539 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 75 | 831 | IPR027417 | - | |
| Cla05g00393 | 1539 | Pfam | DIL domain | 1361 | 1464 | IPR002710 | - | |
| Cla05g00393 | 1539 | ProSiteProfiles | IQ motif profile. | 854 | 881 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | ProSiteProfiles | IQ motif profile. | 829 | 858 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | Coils | Coil | 1060 | 1094 | - | - | |
| Cla05g00393 | 1539 | ProSiteProfiles | Myosin motor domain profile. | 104 | 778 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla05g00393 | 1539 | Coils | Coil | 976 | 996 | - | - | |
| Cla05g00393 | 1539 | Pfam | Myosin head (motor domain) | 106 | 766 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla05g00393 | 1539 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 50 | 99 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla05g00393 | 1539 | Gene3D | - | 713 | 776 | - | - | |
| Cla05g00393 | 1539 | Gene3D | - | 485 | 669 | - | - | |
| Cla05g00393 | 1539 | Gene3D | - | 880 | 928 | - | - | |
| Cla05g00393 | 1539 | Gene3D | - | 781 | 830 | - | - | |
| Cla05g00393 | 1539 | Gene3D | - | 831 | 879 | - | - | |
| Cla05g00393 | 1539 | PANTHER | MYOSIN-7 | 48 | 1537 | - | - | |
| Cla05g00393 | 1539 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 358 | 647 | - | - | |
| Cla05g00393 | 1539 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 836 | 929 | IPR027417 | - | |
| Cla05g00393 | 1539 | ProSiteProfiles | IQ motif profile. | 877 | 906 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | CDD | MyosinXI_CBD | 1143 | 1508 | IPR037975 | GO:0007015 | |
| Cla05g00393 | 1539 | ProSiteProfiles | IQ motif profile. | 804 | 833 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | CDD | MYSc_Myo11 | 118 | 766 | IPR036018 | - | |
| Cla05g00393 | 1539 | Gene3D | Kinesin motor domain | 107 | 708 | IPR036961 | - | |
| Cla05g00393 | 1539 | Pfam | Myosin N-terminal SH3-like domain | 52 | 94 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla05g00393 | 1539 | SMART | MYSc_2a | 98 | 779 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla05g00393 | 1539 | SMART | DIL_2 | 1360 | 1467 | IPR002710 | - | |
| Cla05g00393 | 1539 | PANTHER | MYOSIN | 48 | 1537 | - | - | |
| Cla05g00393 | 1539 | PRINTS | Myosin heavy chain signature | 134 | 153 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla05g00393 | 1539 | PRINTS | Myosin heavy chain signature | 191 | 216 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla05g00393 | 1539 | PRINTS | Myosin heavy chain signature | 242 | 269 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla05g00393 | 1539 | PRINTS | Myosin heavy chain signature | 475 | 503 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla05g00393 | 1539 | PRINTS | Myosin heavy chain signature | 528 | 556 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cla05g00393 | 1539 | Coils | Coil | 1018 | 1052 | - | - | |
| Cla05g00393 | 1539 | ProSiteProfiles | IQ motif profile. | 900 | 929 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | Coils | Coil | 937 | 957 | - | - | |
| Cla05g00393 | 1539 | Pfam | IQ calmodulin-binding motif | 902 | 921 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | Pfam | IQ calmodulin-binding motif | 783 | 801 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | Pfam | IQ calmodulin-binding motif | 878 | 897 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | Pfam | IQ calmodulin-binding motif | 831 | 850 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | Pfam | IQ calmodulin-binding motif | 807 | 824 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | ProSiteProfiles | Dilute domain profile. | 1192 | 1485 | IPR002710 | - | |
| Cla05g00393 | 1539 | Gene3D | - | 298 | 356 | - | - | |
| Cla05g00393 | 1539 | SMART | iq_5 | 899 | 921 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | SMART | iq_5 | 803 | 825 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | SMART | iq_5 | 851 | 873 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | SMART | iq_5 | 828 | 850 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | SMART | iq_5 | 780 | 802 | IPR000048 | GO:0005515 | |
| Cla05g00393 | 1539 | SMART | iq_5 | 876 | 898 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla02g01395 | Cla-Chr2:28425973 | Cla05g00393 | Cla-Chr5:3553666 | 0 | transposed | |
| Cla02g01661 | Cla-Chr2:31426214 | Cla05g00393 | Cla-Chr5:3553666 | 0 | transposed | |
| Cla03g00451 | Cla-Chr3:5097394 | Cla05g00393 | Cla-Chr5:3553666 | 3.11E-06 | transposed | |
| Cla08g00984 | Cla-Chr8:22519933 | Cla05g00393 | Cla-Chr5:3553666 | 0 | transposed | |
| Cla09g00324 | Cla-Chr9:3151804 | Cla05g00393 | Cla-Chr5:3553666 | 0 | transposed | |
| Cla09g00751 | Cla-Chr9:7447918 | Cla05g00393 | Cla-Chr5:3553666 | 0 | transposed | |
| Cla11g01804 | Cla-Chr11:31704159 | Cla05g00393 | Cla-Chr5:3553666 | 9.64E-171 | transposed | |
| Cla05g00393 | Cla-Chr5:3553666 | Cla06g00123 | Cla-Chr6:1339129 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla05g00393 | K10357 | - | csv:101221506 | 2816.57 |