Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g00449 ATGATTCGCCATAAACCTCAAACCAACCTTGGAATGATTCACAATACTCTATATATAAACTTAAAACCAACCCTTAAATCATTCATTGCTTTCCAAATTTCTTCCCCCTCCAACTTGTTTGAAATCAAGAAGGAAATCAACAAAATGGCTCAAGAACTGGGAGTTCTAAATGCACTTGATGTTGCAAAGACTCAATGGTACCATTTCACAGCCATCATCATAGCTGGAATGGGGTTCTTCACCGATGCCTACGATCTTTTTTGCATTGCGGTCGTGTCAAAGTTGCTCGGTCGCATATACTACTACACGCCAGGGTCGGGGCGGCCAGGGTCGCTTCCTCCAAACGTGTCGGCGGCAGTGAGTGGCGTGGCGCTTTGTGGAACTCTGAGCGGGCAACTGTTTTTCGGGTGGCTGGGTGACAAGATGGGAAGGAAGAAAGTGTATGGGATAACGTTGATTCTGATGGTGATATGTTCATTTGGGTCAGGGCTAAGTTTTGGGCACTCGGCCAAAGCAACATTGACAACATTATGTCTATTTCGGTTCTGGCTTGGGTTTGGGATTGGTGGTGATTATCCACTTTCCGCAACAATTATGTCCGAATATGCAAATAAGAAAACTCGTGGGGCTTTTATAGCAGCTGTTTTTGCCATGCAAGGTTTCGGAATTTTGGCTGGTGGGATCGTCGCTTTGATTGTTTCAGCTGCATTCAATAATAGATTCCCAGCTCCCTCATATGAGATTGACGCGGTGGGGTCAACCGTACCAGAGGCGGACTATGTATGGCGCATAGTTCTAATGTTTGGCGCCATCCCTGCCGGAATGACATACTACTGGCGTATGAAGATGCCGGAAACAGCCCGTTACACGGCTCTAGTGGCGAAGAATGCGAAACAAGCCGCGGCGGACATGTCGAAAGTGTTACAAGTAGAGGTGGAGGCAGAGGAAGAGAAGCTAGAGAAGATAGTAAGCACAACCAGAAACAACTTTGGCTTGTTTTCCAAACAGTTCCTCAAACGCCATGGCCTCCACTTGCTTGGAACCACAAGCACTTGGTTCTTACTCGACATTGCATTTTACAGCCAAAATCTCTTCCAAAAAGACATCTACACTGCAATTGGTTGGCTCCCTCCCGCAAAAACAATGAGCGGCCTCGAGGAGTGCTATCGTATCGCCAAGGCTCAGACGCTGATTGCACTTTGTGGGACTGTGCCCGGCTATTGGTTCACCGTGGCTCTGATTGATATTATTGGTAGATTCACTATCCAATTAATTGGGTTCATTATGATGACTATTTTCATGTTTGCCATTGCCATCCCTTACAACCATTGGATTTTGAAAGAGAATCGAATTGGGTTTGTGGTCATGTATTCCTTGACCTTTTTCTTCGCCAATTTTGGGCCTAATTCCACTACTTTCATTGTTCCTGCTGAAATATTCCCGGCAAGACTTAGGTCCACATGTCACGGCATCTCTGCTGCCGCCGGCAAGGCTGGTGCAATCATTGGTGCTTTTGGGTTCTTGTATGCAGCGCAAAATCCTGACCCGACAAAAACTGACCCAGGTTACCCACCGGGTATTGGTGTTAAGAACTCTCTTATTGCACTTGGTTGCATCAACTTCCTTGGTGGTTTACTCACCTTGTTAGTGCCCGAACCTAAAGGAAAATCACTTGAGGAGTTGACCGGAGAGAACGAGGCGCCGGAAGAAAATGTCGTCGGGCAACCACAAGTGTGA 1737 46.69 MIRHKPQTNLGMIHNTLYINLKPTLKSFIAFQISSPSNLFEIKKEINKMAQELGVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCIAVVSKLLGRIYYYTPGSGRPGSLPPNVSAAVSGVALCGTLSGQLFFGWLGDKMGRKKVYGITLILMVICSFGSGLSFGHSAKATLTTLCLFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAAFNNRFPAPSYEIDAVGSTVPEADYVWRIVLMFGAIPAGMTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVEVEAEEEKLEKIVSTTRNNFGLFSKQFLKRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIYTAIGWLPPAKTMSGLEECYRIAKAQTLIALCGTVPGYWFTVALIDIIGRFTIQLIGFIMMTIFMFAIAIPYNHWILKENRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQNPDPTKTDPGYPPGIGVKNSLIALGCINFLGGLLTLLVPEPKGKSLEELTGENEAPEENVVGQPQV 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4011771 4016441 - ClCG05G004350.2 Cla05g00449 271939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g00449 578 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 49 574 - -
Cla05g00449 578 MobiDBLite consensus disorder prediction 557 578 - -
Cla05g00449 578 CDD MFS_PhT 72 554 - -
Cla05g00449 578 Gene3D MFS general substrate transporter like domains 67 314 IPR036259 -
Cla05g00449 578 Gene3D MFS general substrate transporter like domains 318 576 IPR036259 -
Cla05g00449 578 ProSiteProfiles Major facilitator superfamily (MFS) profile. 71 555 IPR020846 GO:0022857
Cla05g00449 578 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 49 574 - -
Cla05g00449 578 Pfam Sugar (and other) transporter 73 561 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cla05g00449 578 TIGRFAM 2A0109: phosphate:H+ symporter 58 564 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cla05g00449 578 SUPERFAMILY MFS general substrate transporter 58 561 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla05g00449 Cla06g00662 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00449 Cla-Chr5:4011771 Cla06g00662 Cla-Chr6:8381823 0 dispersed
Cla05g00448 Cla-Chr5:3994632 Cla05g00449 Cla-Chr5:4011771 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g00449 K08176 - csv:101213007 973.77