Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla05g00514 ATGGGTAATGCTGATTTTGAATGCCCTCACAGAGTAGCCATTCCTCCAAAAAAGCCCTTCTTCCACTCCTTATCTTCCAATCTCAAAGAAACCTTCTTCCCCGATGACCCTTTCAAACAATTCAAAAACCAACCTTTGCCCACCCAAATCCTTCTCTGGCTTAAATACTTCATCCCCTTTCTTGATTGGGCTCCTCGTTACACTTTCGACTTCTTCAAAGCCGACCTCGTCGCTGGTATCACCATCGCCAGTTTGGCCGTCCCTCAGGGTATCAGCTATGCCAATCTCGCCAGTATCCCTCCCATCATCGGACTTTATTCCAGCTTCATCCCACCCTTGGTATACGCCATGTTCGGAAGCTCCAAAGATATAGCAGTGGGGACGGTGGCAGTAGCTTCCTTGCTTATGTCTGCCATGTTGGGGAAGGAAGTCAACCCGGTAGAGCATCCAAAGCAATACGTTCAATTGGTTTTCACTGCCACCTTCTTTGCAGGGGTTTTTCAGGCTTCTCTCGGGTTTCTCAGATTAGGGCTGATTGTGGACTTTTTGTCGCATGCAACAATAGTGGGCTTCATGGGTGGTGCAGCAACCGTGGTTTGTCTTCAGCAATTGAAAGGCATAACGGGATTGCTTCATTTTACGCATGAGACTGATATTGTATCCGTTATGCGCTCTCTTTTCTCTCAAATTCACAAGGTTTTTCTTTCCCCCGCCATTTTTTGGAGATGGGAAAGTATTGTGTTGGGTTGCTGTTTTCTCTTCTTTCTCCTCCTCACTAGATACTTGAGCAAGAAGAAAGCAATCTTCTTTTGGATAAATGCATTGGCGCCTTTGACTTCGGTCATCTTGGGAAGTCTTCTCGTTTACTTAACCCATGCTGAAAAGCATGGAGTTCAAGTGATTGGGAATTTGAAGAAAGGGTTGAATCCCCCTTCTGTATCTGATTTAGTATTTGGATCCCCTCATCTCGCCGTTGCCATCAAAACAGGGATCATCATCGGAATCATTGGCCTCGCTGAAGGAGTTGCAGTGGGAAGAAGTTTTGCTGCTTTTAAGAACTACCACATTGATGGAAACAAGGAGATGATAGCATTTGGGATGATGAACATTGTTGGTTCTTGCACTTCTTGCTACCTTACTGCAGTTGAGCTTATCACTCAGGGACTAATATGGATAGAATATGCAGGACCATTTTCGAGGACTGCGGTGAATTTCAATGCAGGATGTAAAACTGCGGTCTCAAATATTGTCATGGCAATTGCTCTGATGATCACTCTGTTGTTTTTGACGCCATTTTTTCATTACACACCCCTGGTGGTGCTTTCCTCCATAATCATCACTGCTATGCTCGGCCTAATCAACTATGAAGAAGTCATCCACCTTTGGAAAATTGACAAATTTGACTTTGTCGTCTGCCTCGGTGCATATATCGGTGTCGTCTTTGGCAGCGTTGAAACTGGCTTGATTGTTGCGATTACACTCTCTTTGTTAAGGGTGCTTCTAATCATCGCGAGGCCAAGAACTTTAGTATTAGGCAACATTCCCAACTCGACAATTTACAGAAGCATCGATCAATACCCAACAGCCAAAAATGTGCCTGGAATTCTCATCCTCCAATTGGAGGCCCCGATCTATTTTGCCAACTCAAACTACCTGAGAGAAAGGCTTTCAAGGTGGATTACAGATGAAGAACAGAGGATAAAATCATCTGGAGAAACCAGCTTGCAGTATATAATTCTAGACATTTCCGGCGTAAGTAGCATTGACTCAAGTGGAATCAGCATGCTTGAAGAGGTTAAGAAGAGTACTGAAAGAAAGGGTCTCAAAGTACGTATTTCCAAATCCTTGTTCATCTTAAATTCCCTCAAGCTTGTGCTTGCAAATCCAAGAAGTGAAGTGATAAAAAAGTTAAACGAAGCAAAGTTCATCGAGGCGATCGGACAGGAATGGATCTATCTTACAGTGGGAGAGGCTGTAACAGCTTGCAACTTCATGCTCCACACTTGCAAGCCAAATCCTGTTGCTGCTGAATTAGATTCACCTGTGTAG 2049 44.12 MGNADFECPHRVAIPPKKPFFHSLSSNLKETFFPDDPFKQFKNQPLPTQILLWLKYFIPFLDWAPRYTFDFFKADLVAGITIASLAVPQGISYANLASIPPIIGLYSSFIPPLVYAMFGSSKDIAVGTVAVASLLMSAMLGKEVNPVEHPKQYVQLVFTATFFAGVFQASLGFLRLGLIVDFLSHATIVGFMGGAATVVCLQQLKGITGLLHFTHETDIVSVMRSLFSQIHKVFLSPAIFWRWESIVLGCCFLFFLLLTRYLSKKKAIFFWINALAPLTSVILGSLLVYLTHAEKHGVQVIGNLKKGLNPPSVSDLVFGSPHLAVAIKTGIIIGIIGLAEGVAVGRSFAAFKNYHIDGNKEMIAFGMMNIVGSCTSCYLTAVELITQGLIWIEYAGPFSRTAVNFNAGCKTAVSNIVMAIALMITLLFLTPFFHYTPLVVLSSIIITAMLGLINYEEVIHLWKIDKFDFVVCLGAYIGVVFGSVETGLIVAITLSLLRVLLIIARPRTLVLGNIPNSTIYRSIDQYPTAKNVPGILILQLEAPIYFANSNYLRERLSRWITDEEQRIKSSGETSLQYIILDISGVSSIDSSGISMLEEVKKSTERKGLKVRISKSLFILNSLKLVLANPRSEVIKKLNEAKFIEAIGQEWIYLTVGEAVTACNFMLHTCKPNPVAAELDSPV 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4768696 4774310 + ClCG05G004920.2 Cla05g00514 272004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla05g00514 682 ProSiteProfiles STAS domain profile. 525 662 IPR002645 -
Cla05g00514 682 PANTHER SULFATE TRANSPORTER 4 676 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cla05g00514 682 Pfam Sulfate permease family 72 473 IPR011547 GO:0016021
Cla05g00514 682 Gene3D STAS domain 505 664 IPR036513 -
Cla05g00514 682 SUPERFAMILY SpoIIaa-like 529 662 IPR036513 -
Cla05g00514 682 ProSitePatterns SLC26A transporters signature. 101 122 IPR018045 GO:0008271|GO:0008272
Cla05g00514 682 CDD STAS_SulP_like_sulfate_transporter 526 655 - -
Cla05g00514 682 TIGRFAM sulP: sulfate permease 59 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cla05g00514 682 Pfam STAS domain 526 613 IPR002645 -
Cla05g00514 682 PANTHER BNAA04G05880D PROTEIN 4 676 IPR030311 GO:0008272|GO:0009507|GO:0015116
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00514 Cla-Chr5:4768696 Cla06g01018 Cla-Chr6:21746864 0 dispersed
Cla05g00514 Cla-Chr5:4768696 Cla09g00680 Cla-Chr9:6486960 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla05g00514 K17471 - csv:101203205 1158.67